NIRCam Coronagraphy Pipeline Notebook

NIRCam Coronagraphy Pipeline Notebook#

Authors: B. Sunnquist, based on the NIRISS/NIRCam imaging notebooks by R. Diaz and B. Hilbert
Last Updated: May 5, 2025
Pipeline Version: 1.18.0 (Build 11.3)

Purpose:
This notebook provides a framework for processing generic Near-Infrared Camera (NIRCam) Coronagraphy data through all three James Webb Space Telescope (JWST) pipeline stages. Data is assumed to be located in a folder structure following the paths set up below. It should not be necessary to edit any cells other than in the Configuration section unless modifying the standard pipeline processing options.

Data:
This example is set up to use an example dataset from Program ID 1386 (PI: Sasha Hinkley). The science PSF is HIP-65426 which is taken using 2 different roll angles in observations 2 and 3. These observations use the DEEP8 readout pattern with 2 integrations per exposure and 15 groups per intergration. The PSF reference star is HIP-68245 taken in observation 1 using a 9-POINT-CIRCLE dither pattern. This observation uses the MEDIUM8 readout pattern with 2 integrations per exposure and 4 groups per integration. All data is observed on the NRCALONG detector with the SUB320A335R subarray and uses the F444W filter and MASK335R round coronagraphic mask. Example input data to use will be downloaded automatically unless disabled (i.e., to use local files instead).

JWST pipeline version and CRDS context:
This notebook was written for the above-specified pipeline version and associated build context for this version of the JWST Calibration Pipeline. Information about this and other contexts can be found in the JWST Calibration Reference Data System (CRDS server). If you use different pipeline versions, please refer to the table here to determine what context to use. To learn more about the differences for the pipeline, read the relevant documentation.

Please note that pipeline software development is a continuous process, so results in some cases may be slightly different if a subsequent version is used. For optimal results, users are strongly encouraged to reprocess their data using the most recent pipeline version and associated CRDS context, taking advantage of bug fixes and algorithm improvements. Any known issues for this build are provided in the JWST User Documentaion.

Updates:
This notebook is regularly updated as improvements are made to the pipeline. Find the most up to date version of this notebook at: https://github.com/spacetelescope/jwst-pipeline-notebooks/

Recent Changes:
Feb 26, 2025: original notebook created
May 5, 2025: Updated to jwst 1.18.0 (no significant changes)

Table of Contents#

Configuration
Package Imports
Demo Mode Setup (ignore if not using demo data)
Directory Setup
Detector1 Pipeline
Image2 Pipeline
Coron3 Pipeline
Visualize the final PSF-subtracted images

1. Configuration#

Install dependencies and parameters#

To make sure that the pipeline version is compatabile with the steps discussed below and the required dependencies and packages are installed, you can create a fresh conda environment and install the provided requirements.txt file:

conda create -n nircam_coronagraphy_pipeline python=3.11
conda activate nircam_coronagraphy_pipeline
pip install -r requirements.txt

Set the basic parameters to use with this notebook.#

These parameters will affect what data is used, where data is located (if already in disk), and pipeline modules run in this data. The list of parameters are:

demo_mode
directories with data
pipeline modules

# Basic import necessary for configuration
import os

Note that demo_mode must be set appropriately below.

Set demo_mode = True to run in demonstration mode. In this mode this notebook will download example data from the Barbara A. Mikulski Archive for Space Telescopes (MAST) and process it through the pipeline. This will all happen in a local directory unless modified in Section 3 below.

Set demo_mode = False if you want to process your own data that has already been downloaded and provide the location of the data.

# Set parameters for demo_mode, channel, band, data mode directories, and 
# processing steps.

# -----------------------------Demo Mode---------------------------------
demo_mode = True

if demo_mode:
    print('Running in demonstration mode using online example data!')

# --------------------------User Mode Directories------------------------
# If demo_mode = False, look for user data in these paths
if not demo_mode:
    # Set directory paths for processing specific data; these will need
    # to be changed to your local directory setup (below are given as
    # examples)
    basedir = os.path.join(os.getcwd(), '')

    # Point to where science observation data are
    # Assumes uncalibrated data in <sci_dir>/uncal/ and results in stage1,
    # stage2, stage3 directories
    sci_dir = os.path.join(basedir, 'PID1386/')

    # Create directory if it does not exist
    if not os.path.isdir(sci_dir):
        os.mkdir(sci_dir)

    print('Using user provided files')

# --------------------------Set Processing Steps--------------------------
# Individual pipeline stages can be turned on/off here.  Note that a later
# stage won't be able to run unless data products have already been
# produced from the prior stage.

# Science processing
dodet1 = True  # calwebb_detector1
doimage2 = True  # calwebb_image2
docoron3 = True  # calwebb_coron3

Running in demonstration mode using online example data!

Set CRDS context and server#

Before importing CRDS and JWST modules, we need to configure our environment. This includes defining a CRDS cache directory in which to keep the reference files that will be used by the calibration pipeline.

If the root directory for the local CRDS cache directory has not been set already, it will be set to create one in the home directory.

Build Context Table

# ------------------------Set CRDS context and paths----------------------

# Each version of the calibration pipeline is associated with a specific CRDS
# context file. The pipeline will select the appropriate context file behind
# the scenes while running. However, if you wish to override the default context
# file and run the pipeline with a different context, you can set that using
# the CRDS_CONTEXT environment variable. Here we show how this is done,
# although we leave the line commented out in order to use the default context.
# If you wish to specify a different context, uncomment the line below.
#os.environ['CRDS_CONTEXT'] = 'jwst_1322.pmap'  # CRDS context for 1.17.1

# Check whether the local CRDS cache directory has been set.
# If not, set it to the user home directory
if (os.getenv('CRDS_PATH') is None):
    os.environ['CRDS_PATH'] = os.path.join(os.path.expanduser('~'), 'crds')
# Check whether the CRDS server URL has been set.  If not, set it.
if (os.getenv('CRDS_SERVER_URL') is None):
    os.environ['CRDS_SERVER_URL'] = 'https://jwst-crds.stsci.edu'

# Echo CRDS path in use
print(f"CRDS local filepath: {os.environ['CRDS_PATH']}")
print(f"CRDS file server: {os.environ['CRDS_SERVER_URL']}")
if os.getenv('CRDS_CONTEXT'):
    print(f"CRDS CONTEXT: {os.environ['CRDS_CONTEXT']}")

CRDS local filepath: /home/runner/crds
CRDS file server: https://jwst-crds.stsci.edu

2. Package Imports#

# Use the entire available screen width for this notebook
from IPython.display import display, HTML
display(HTML("<style>.container { width:95% !important; }</style>"))

# Basic system utilities for interacting with files
# ----------------------General Imports------------------------------------
import glob
import time

# To display full ouptut of cell, not just the last result
from IPython.core.interactiveshell import InteractiveShell
InteractiveShell.ast_node_interactivity = "all"

# -----------------------Astropy/Astroquery Imports--------------------------------
# for viewing astropy images and tables
from astropy.io import fits
from astropy.table import Table

# for downloading demo files
from astroquery.mast import Observations

# ------------ Pipeline and  Visualization Imports -----------------------
# for visualizing images
import matplotlib.pyplot as plt

# for JWST calibration pipeline
import jwst
import crds

from jwst.pipeline import Detector1Pipeline
from jwst.pipeline import Image2Pipeline
from jwst.pipeline import Coron3Pipeline

# JWST pipeline utilities
from jwst import datamodels
from jwst.associations import asn_from_list  # Tools for creating association files
from jwst.associations.lib.rules_level3 import Asn_Lv3NRCCoron  # Definition of a Lvl3 association file

# Echo pipeline version and CRDS context in use
print(f"JWST Calibration Pipeline Version: {jwst.__version__}")
print(f"Using CRDS Context: {crds.get_context_name('jwst')}")

JWST Calibration Pipeline Version: 1.18.0

CRDS - INFO -  Calibration SW Found: jwst 1.18.0 (/usr/share/miniconda/lib/python3.13/site-packages/jwst-1.18.0.dist-info)

Using CRDS Context: jwst_1364.pmap

# Start a timer to keep track of runtime
time0 = time.perf_counter()

3. Demo Mode Setup (ignore if not using demo data)#

If running in demonstration mode, set up the program information to retrieve the uncalibrated data automatically from MAST using astroquery. MAST allows for flexibility of searching by the proposal ID and the observation ID instead of just filenames.

We will download data from Program ID 1386 (PI: Sasha Hinkley). The science target is HIP-65426 which is taken using 2 different roll angles in observations 2 and 3 (2 total uncal files). The reference PSF is HIP-68245 taken in observation 1 using a 9-POINT-CIRCLE dither pattern (9 total uncal files). All data is observed on the NRCALONG detector with the SUB320A335R subarray and uses the F444W filter and MASK335R round coronagraphic mask.

More information about the JWST file naming conventions can be found at: https://jwst-pipeline.readthedocs.io/en/latest/jwst/data_products/file_naming.html

# Set up the program information and paths for demo program
if demo_mode:
    print('Running in demonstration mode and will download example data from MAST!')

    program = "01386"
    data_dir = os.path.join('.', 'nrc_coron_demo_data')
    download_dir = data_dir
    sci_dir = data_dir
    uncal_dir = os.path.join(sci_dir, 'uncal')

    # Ensure filepaths for input data exist
    if not os.path.exists(uncal_dir):
        os.makedirs(uncal_dir)

    # Create directory if it does not exist
    if not os.path.isdir(data_dir):
        os.mkdir(data_dir)

Running in demonstration mode and will download example data from MAST!

Identify list of science (SCI) uncalibrated files associated with visits.

# Obtain a list of observation IDs for the specified demo program
if demo_mode:
    sci_obs_id_table = Observations.query_criteria(instrument_name=["NIRCAM/CORON"],
                                                   proposal_id=program,
                                                   filters=['F444W']
                                                   )

if demo_mode:
    sci_obs_id_table

Table masked=True length=1

intentType	obs_collection	provenance_name	instrument_name	project	filters	wavelength_region	target_name	target_classification	obs_id	s_ra	s_dec	dataproduct_type	proposal_pi	calib_level	t_min	t_max	t_exptime	em_min	em_max	obs_title	t_obs_release	proposal_id	proposal_type	sequence_number	s_region	jpegURL	dataURL	dataRights	mtFlag	srcDen	obsid	objID
str7	str4	str7	str12	str4	str13	str8	str9	str45	str51	float64	float64	str5	str14	int64	float64	float64	float64	float64	float64	str70	float64	str4	str3	int64	str118	str77	str78	str6	bool	float64	str9	str9
science	JWST	CALJWST	NIRCAM/CORON	JWST	F444W;MASKRND	INFRARED	HIP-65426	Star; A dwarfs; Exoplanet Systems; Exoplanets	jw01386-c1020_t001_nircam_f444w-maskrnd-sub320a335r	201.1500665548344	-51.50457720582166	image	Hinkley, Sasha	3	59789.95872105648	59790.21965303241	1231.534	3880.0	4986.0	High Contrast Imaging of Exoplanets and Exoplanetary Systems with JWST	59790.38636572	1386	ERS	--	POLYGON 201.146700619 -51.500267089 201.156410546 -51.50250304 201.152838055 -51.508514975 201.143127022 -51.506278729	mast:JWST/product/jw01386-c1020_t001_nircam_f444w-maskrnd-sub320a335r_i2d.jpg	mast:JWST/product/jw01386-c1020_t001_nircam_f444w-maskrnd-sub320a335r_i2d.fits	PUBLIC	False	nan	101155383	741691533

# Turn the list of visits into a list of uncalibrated data files
if demo_mode:
    # Define types of files to select
    file_dict = {'uncal': {'product_type': 'SCIENCE',
                           'productSubGroupDescription': 'UNCAL',
                           'filters': 'F444W;MASKRND',
                           'calib_level': [1]}}

    # Science files
    sci_files_to_download = []

    # Loop over visits identifying uncalibrated files that are associated with them
    for exposure in (sci_obs_id_table):
        products = Observations.get_product_list(exposure)
        for filetype, query_dict in file_dict.items():
            filtered_products = Observations.filter_products(products, productType=query_dict['product_type'],
                                                             productSubGroupDescription=query_dict['productSubGroupDescription'],
                                                             filters=query_dict['filters'],
                                                             calib_level=query_dict['calib_level'])
            sci_files_to_download.extend(filtered_products['dataURI'])
    sci_files_to_download = sorted(sci_files_to_download)
    print(f"Science files selected for downloading: {len(sci_files_to_download)}")

Science files selected for downloading: 11

# List the files to download
if demo_mode:
    sci_files_to_download

[np.str_('mast:JWST/product/jw01386001001_0310e_00001_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00002_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00003_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00004_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00005_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00006_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00007_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00008_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386001001_0310e_00009_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386002001_0310a_00001_nrcalong_uncal.fits'),
 np.str_('mast:JWST/product/jw01386003001_0310a_00001_nrcalong_uncal.fits')]

Download all the uncal files and place them into the appropriate directories.

Warning: If this notebook is halted during this step the downloaded file may be incomplete, and cause crashes later on!

# Download the demo data if it does not already exist
if demo_mode:
    for filename in sci_files_to_download:
        sci_manifest = Observations.download_file(filename,
                                                  local_path=uncal_dir)

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00001_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00001_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00002_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00002_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00003_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00003_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00004_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00004_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00005_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00005_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00006_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00006_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00007_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00007_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00008_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00008_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386001001_0310e_00009_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386001001_0310e_00009_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386002001_0310a_00001_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386002001_0310a_00001_nrcalong_uncal.fits ...

 [Done]

Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:JWST/product/jw01386003001_0310a_00001_nrcalong_uncal.fits to nrc_coron_demo_data/uncal/jw01386003001_0310a_00001_nrcalong_uncal.fits ...

 [Done]

4. Directory Setup#

Set up detailed paths to input/output stages here.

# Define output subdirectories to keep science data products organized

uncal_dir = os.path.join(sci_dir, 'uncal')  # Uncalibrated pipeline inputs should be here
det1_dir = os.path.join(sci_dir, 'stage1')  # calwebb_detector1 pipeline outputs will go here
image2_dir = os.path.join(sci_dir, 'stage2')  # calwebb_image2 pipeline outputs will go here
coron3_dir = os.path.join(sci_dir, 'stage3')  # calwebb_coron3 pipeline outputs will go here

# We need to check that the desired output directories exist, and if not create them
if not os.path.exists(det1_dir):
    os.makedirs(det1_dir)
if not os.path.exists(image2_dir):
    os.makedirs(image2_dir)
if not os.path.exists(coron3_dir):
    os.makedirs(coron3_dir)

Look at the first file to determine exposure parameters and practice using JWST datamodels to show basic exposure information.

# List uncal files
uncal_files = sorted(glob.glob(os.path.join(uncal_dir, '*_uncal.fits')))

colnames = ('Instrument', 'Filter', 'Pupil', 'Number of Integrations', 'Number of Groups',
            'Readout pattern', 'Dither position number')
dtypes = ('S7', 'S10', 'S10', 'i4', 'i4', 'S15', 'i4')
meta_check = Table(names=(colnames), dtype=dtypes)

# Open example files and get metadata for display
if len(uncal_files) > 0:
    lw_examine = datamodels.open(uncal_files[0])
    lw_row = [lw_examine.meta.instrument.name, lw_examine.meta.instrument.filter,
              lw_examine.meta.instrument.pupil, lw_examine.meta.exposure.nints,
              lw_examine.meta.exposure.ngroups, lw_examine.meta.exposure.readpatt,
              lw_examine.meta.dither.position_number]
    meta_check.add_row(lw_row)

# Print out exposure info
meta_check

Table length=1

Instrument	Filter	Pupil	Number of Integrations	Number of Groups	Readout pattern	Dither position number
bytes7	bytes10	bytes10	int32	int32	bytes15	int32
NIRCAM	F444W	MASKRND	2	4	MEDIUM8	1

# Print out the time benchmark
time_det1 = time.perf_counter()
print(f"Runtime so far: {time_det1 - time0:0.0f} seconds")

Runtime so far: 17 seconds

5. Detector1 Pipeline#

Run the datasets through the Detector1 stage of the pipeline to apply detector level calibrations and create a countrate data product where slopes are fitted to the integration ramps. These *_rate.fits products are 2D (nrows x ncols), averaged over all integrations. 3D countrate data products (*_rateints.fits) are also created (nintegrations x nrows x ncols) which have the fitted ramp slopes for each integration.

By default, all steps in the Detector1 stage of the pipeline are run for NIRCam except the ipc correction step and the gain_scale step. Note that the persistence step has been turned off by default starting with CRDS context jwst_1264.pmap. This step does not automatically correct the science data for persistence. The persistence step creates a *_trapsfilled.fits file which is a model that records the number of traps filled at each pixel at the end of an exposure. This file would be used as an input to the persistence step, via the input_trapsfilled argument, to correct the subsequent science exposure for persistence. Since persistence is not well calibrated for NIRCam, the step has been turned off in order to speed up calibration and to not create empty *_trapsfilled.fits files. This step can be turned on when running the pipeline by setting skip = False in the cell below using a dictionary.

An additional 1/f noise-cleaning algorithm, clean_flicker_noise, has been implemented at the group stage in the Detector1Pipeline. This step is also off by default. The cell bellow provides an example on how to turn it on and change parameters.

As of CRDS context jwst_1155.pmap and later, the jump step of the Detector1 stage of the pipeline will remove signal associated with snowballs in the NIRCam imaging and coronagraphy modes. This correction is turned on using the parameter expand_large_events=True. This and other parameters related to the snowball correction are specified in the pars-jumpstep parameter reference file. Users may wish to alter parameters to optimize removal of snowball residuals. Available parameters are discussed in the Detection and Flagging of Showers and Snowballs in JWST Technical Report (Regan 2023).

# Set up a dictionary to define how the Detector1 pipeline should be configured

# Boilerplate dictionary setup
det1dict = {}
det1dict['group_scale'], det1dict['dq_init'], det1dict['saturation'] = {}, {}, {}
det1dict['ipc'], det1dict['superbias'], det1dict['refpix'] = {}, {}, {}
det1dict['linearity'], det1dict['persistence'], det1dict['dark_current'], = {}, {}, {}
det1dict['charge_migration'], det1dict['jump'], det1dict['clean_flicker_noise'] = {}, {}, {}
det1dict['ramp_fit'], det1dict['gain_scale'] = {}, {}

# Overrides for whether or not certain steps should be skipped
# skipping the persistence step
det1dict['persistence']['skip'] = True

# Overrides for various reference files
# Files should be in the base local directory or provide full path
#det1dict['dq_init']['override_mask'] = 'myfile.fits'  # Bad pixel mask
#det1dict['saturation']['override_saturation'] = 'myfile.fits'  # Saturation
#det1dict['reset']['override_reset'] = 'myfile.fits'  # Reset
#det1dict['linearity']['override_linearity'] = 'myfile.fits'  # Linearity
#det1dict['rscd']['override_rscd'] = 'myfile.fits'  # RSCD
#det1dict['dark_current']['override_dark'] = 'myfile.fits'  # Dark current subtraction
#det1dict['jump']['override_gain'] = 'myfile.fits'  # Gain used by jump step
#det1dict['ramp_fit']['override_gain'] = 'myfile.fits'  # Gain used by ramp fitting step
#det1dict['jump']['override_readnoise'] = 'myfile.fits'  # Read noise used by jump step
#det1dict['ramp_fit']['override_readnoise'] = 'myfile.fits'  # Read noise used by ramp fitting step

# Turn on multi-core processing (This is off by default). Choose what fraction
# of cores to use (quarter, half, all, or an integer number)
det1dict['jump']['maximum_cores'] = 'half'

# Explicitly turn on snowball correction. (Even though it is on by default)
det1dict['jump']['expand_large_events'] = True

# Turn on 1/f correction if desired
# For guidance see https://jwst-docs.stsci.edu/known-issues-with-jwst-data/1-f-noise
#det1dict['clean_flicker_noise']['skip'] = False
#det1dict['clean_flicker_noise']['fit_method'] = 'median' # 'median' or 'fft'
#det1dict['clean_flicker_noise']['background_method'] = 'median' # 'median' or 'model'
#det1dict['clean_flicker_noise']['fit_by_channel'] = False

Run the Detector1 pipeline on all input data, regardless of filter.

# Run Detector1 stage of pipeline, specifying:
# output directory to save *_rate.fits files
# save_results flag set to True so the rate files are saved
if dodet1:
    for uncal in uncal_files:
        rate_result = Detector1Pipeline.call(uncal, output_dir=det1_dir, steps=det1dict, save_results=True)
else:
    print('Skipping Detector1 processing')

2025-05-13 13:48:36,969 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_system_datalvl_0002.rmap      694 bytes  (1 / 204 files) (0 / 741.0 K bytes)

2025-05-13 13:48:37,117 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_system_calver_0048.rmap    5.3 K bytes  (2 / 204 files) (694 / 741.0 K bytes)

2025-05-13 13:48:37,192 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_system_0047.imap        385 bytes  (3 / 204 files) (6.0 K / 741.0 K bytes)

2025-05-13 13:48:37,261 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_wavelengthrange_0024.rmap    1.4 K bytes  (4 / 204 files) (6.4 K / 741.0 K bytes)

2025-05-13 13:48:37,326 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_wavecorr_0005.rmap      884 bytes  (5 / 204 files) (7.8 K / 741.0 K bytes)

2025-05-13 13:48:37,447 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_superbias_0079.rmap   36.0 K bytes  (6 / 204 files) (8.6 K / 741.0 K bytes)

2025-05-13 13:48:37,528 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_sirskernel_0001.rmap      630 bytes  (7 / 204 files) (44.6 K / 741.0 K bytes)

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2025-05-13 13:48:37,631 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_saturation_0018.rmap    2.0 K bytes  (9 / 204 files) (65.9 K / 741.0 K bytes)

2025-05-13 13:48:37,768 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_refpix_0015.rmap    1.6 K bytes  (10 / 204 files) (67.9 K / 741.0 K bytes)

2025-05-13 13:48:37,888 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_readnoise_0025.rmap    2.6 K bytes  (11 / 204 files) (69.5 K / 741.0 K bytes)

2025-05-13 13:48:37,958 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pictureframe_0001.rmap      675 bytes  (12 / 204 files) (72.0 K / 741.0 K bytes)

2025-05-13 13:48:37,997 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_photom_0013.rmap      958 bytes  (13 / 204 files) (72.7 K / 741.0 K bytes)

2025-05-13 13:48:38,042 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pathloss_0008.rmap    1.2 K bytes  (14 / 204 files) (73.7 K / 741.0 K bytes)

2025-05-13 13:48:38,085 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-whitelightstep_0001.rmap      777 bytes  (15 / 204 files) (74.9 K / 741.0 K bytes)

2025-05-13 13:48:38,206 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-spec2pipeline_0013.rmap    2.1 K bytes  (16 / 204 files) (75.6 K / 741.0 K bytes)

2025-05-13 13:48:38,270 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-resamplespecstep_0002.rmap      709 bytes  (17 / 204 files) (77.8 K / 741.0 K bytes)

2025-05-13 13:48:38,315 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-outlierdetectionstep_0005.rmap    1.1 K bytes  (18 / 204 files) (78.5 K / 741.0 K bytes)

2025-05-13 13:48:38,435 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-jumpstep_0005.rmap      810 bytes  (19 / 204 files) (79.6 K / 741.0 K bytes)

2025-05-13 13:48:38,480 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-image2pipeline_0008.rmap    1.0 K bytes  (20 / 204 files) (80.4 K / 741.0 K bytes)

2025-05-13 13:48:38,516 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-detector1pipeline_0003.rmap    1.1 K bytes  (21 / 204 files) (81.4 K / 741.0 K bytes)

2025-05-13 13:48:38,553 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-darkpipeline_0003.rmap      872 bytes  (22 / 204 files) (82.5 K / 741.0 K bytes)

2025-05-13 13:48:38,592 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_pars-darkcurrentstep_0003.rmap    1.8 K bytes  (23 / 204 files) (83.4 K / 741.0 K bytes)

2025-05-13 13:48:38,712 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_ote_0030.rmap    1.3 K bytes  (24 / 204 files) (85.2 K / 741.0 K bytes)

2025-05-13 13:48:38,748 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_msaoper_0016.rmap    1.5 K bytes  (25 / 204 files) (86.4 K / 741.0 K bytes)

2025-05-13 13:48:38,784 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_msa_0027.rmap    1.3 K bytes  (26 / 204 files) (87.9 K / 741.0 K bytes)

2025-05-13 13:48:38,820 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_mask_0043.rmap    3.5 K bytes  (27 / 204 files) (89.2 K / 741.0 K bytes)

2025-05-13 13:48:38,977 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_linearity_0017.rmap    1.6 K bytes  (28 / 204 files) (92.7 K / 741.0 K bytes)

2025-05-13 13:48:39,033 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_ipc_0006.rmap      876 bytes  (29 / 204 files) (94.3 K / 741.0 K bytes)

2025-05-13 13:48:39,075 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_ifuslicer_0017.rmap    1.5 K bytes  (30 / 204 files) (95.2 K / 741.0 K bytes)

2025-05-13 13:48:39,110 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_ifupost_0019.rmap    1.5 K bytes  (31 / 204 files) (96.7 K / 741.0 K bytes)

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2025-05-13 13:48:39,192 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_gain_0023.rmap    1.8 K bytes  (33 / 204 files) (99.7 K / 741.0 K bytes)

2025-05-13 13:48:39,227 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_fpa_0028.rmap    1.3 K bytes  (34 / 204 files) (101.5 K / 741.0 K bytes)

2025-05-13 13:48:39,270 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_fore_0026.rmap    5.0 K bytes  (35 / 204 files) (102.7 K / 741.0 K bytes)

2025-05-13 13:48:39,308 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_flat_0015.rmap    3.8 K bytes  (36 / 204 files) (107.7 K / 741.0 K bytes)

2025-05-13 13:48:39,352 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_fflat_0026.rmap    7.2 K bytes  (37 / 204 files) (111.5 K / 741.0 K bytes)

2025-05-13 13:48:39,389 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_extract1d_0018.rmap    2.3 K bytes  (38 / 204 files) (118.7 K / 741.0 K bytes)

2025-05-13 13:48:39,524 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_disperser_0028.rmap    5.7 K bytes  (39 / 204 files) (121.0 K / 741.0 K bytes)

2025-05-13 13:48:39,567 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_dflat_0007.rmap    1.1 K bytes  (40 / 204 files) (126.7 K / 741.0 K bytes)

2025-05-13 13:48:39,608 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_dark_0074.rmap   34.2 K bytes  (41 / 204 files) (127.9 K / 741.0 K bytes)

2025-05-13 13:48:39,651 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_cubepar_0015.rmap      966 bytes  (42 / 204 files) (162.1 K / 741.0 K bytes)

2025-05-13 13:48:39,764 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_collimator_0026.rmap    1.3 K bytes  (43 / 204 files) (163.1 K / 741.0 K bytes)

2025-05-13 13:48:39,808 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_camera_0026.rmap    1.3 K bytes  (44 / 204 files) (164.4 K / 741.0 K bytes)

2025-05-13 13:48:39,844 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_barshadow_0007.rmap    1.8 K bytes  (45 / 204 files) (165.7 K / 741.0 K bytes)

2025-05-13 13:48:39,879 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_area_0018.rmap    6.3 K bytes  (46 / 204 files) (167.5 K / 741.0 K bytes)

2025-05-13 13:48:39,923 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_apcorr_0009.rmap    5.6 K bytes  (47 / 204 files) (173.8 K / 741.0 K bytes)

2025-05-13 13:48:39,959 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nirspec_0398.imap     5.8 K bytes  (48 / 204 files) (179.3 K / 741.0 K bytes)

2025-05-13 13:48:40,014 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_wfssbkg_0010.rmap    3.1 K bytes  (49 / 204 files) (185.1 K / 741.0 K bytes)

2025-05-13 13:48:40,141 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_wavelengthrange_0006.rmap      862 bytes  (50 / 204 files) (188.2 K / 741.0 K bytes)

2025-05-13 13:48:40,183 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_trappars_0004.rmap      753 bytes  (51 / 204 files) (189.1 K / 741.0 K bytes)

2025-05-13 13:48:40,231 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_trapdensity_0005.rmap      705 bytes  (52 / 204 files) (189.9 K / 741.0 K bytes)

2025-05-13 13:48:40,269 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_throughput_0005.rmap    1.3 K bytes  (53 / 204 files) (190.6 K / 741.0 K bytes)

2025-05-13 13:48:40,306 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_superbias_0030.rmap    7.4 K bytes  (54 / 204 files) (191.8 K / 741.0 K bytes)

2025-05-13 13:48:40,346 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_specwcs_0014.rmap    3.1 K bytes  (55 / 204 files) (199.2 K / 741.0 K bytes)

2025-05-13 13:48:40,383 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_specprofile_0008.rmap    2.4 K bytes  (56 / 204 files) (202.4 K / 741.0 K bytes)

2025-05-13 13:48:40,420 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_speckernel_0006.rmap    1.0 K bytes  (57 / 204 files) (204.7 K / 741.0 K bytes)

2025-05-13 13:48:40,463 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_sirskernel_0001.rmap      627 bytes  (58 / 204 files) (205.8 K / 741.0 K bytes)

2025-05-13 13:48:40,501 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_saturation_0015.rmap      829 bytes  (59 / 204 files) (206.4 K / 741.0 K bytes)

2025-05-13 13:48:40,545 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_readnoise_0011.rmap      987 bytes  (60 / 204 files) (207.2 K / 741.0 K bytes)

2025-05-13 13:48:40,581 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_photom_0036.rmap    1.3 K bytes  (61 / 204 files) (208.2 K / 741.0 K bytes)

2025-05-13 13:48:40,618 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_persat_0007.rmap      674 bytes  (62 / 204 files) (209.5 K / 741.0 K bytes)

2025-05-13 13:48:40,653 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pathloss_0003.rmap      758 bytes  (63 / 204 files) (210.1 K / 741.0 K bytes)

2025-05-13 13:48:40,690 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pastasoss_0004.rmap      818 bytes  (64 / 204 files) (210.9 K / 741.0 K bytes)

2025-05-13 13:48:40,730 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-undersamplecorrectionstep_0001.rmap      904 bytes  (65 / 204 files) (211.7 K / 741.0 K bytes)

2025-05-13 13:48:40,766 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-tweakregstep_0012.rmap    3.1 K bytes  (66 / 204 files) (212.6 K / 741.0 K bytes)

2025-05-13 13:48:40,803 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-spec2pipeline_0008.rmap      984 bytes  (67 / 204 files) (215.8 K / 741.0 K bytes)

2025-05-13 13:48:40,845 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-sourcecatalogstep_0002.rmap    2.3 K bytes  (68 / 204 files) (216.7 K / 741.0 K bytes)

2025-05-13 13:48:40,908 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-resamplestep_0002.rmap      687 bytes  (69 / 204 files) (219.1 K / 741.0 K bytes)

2025-05-13 13:48:40,951 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-outlierdetectionstep_0004.rmap    2.7 K bytes  (70 / 204 files) (219.7 K / 741.0 K bytes)

2025-05-13 13:48:41,016 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-jumpstep_0007.rmap    6.4 K bytes  (71 / 204 files) (222.4 K / 741.0 K bytes)

2025-05-13 13:48:41,053 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-image2pipeline_0005.rmap    1.0 K bytes  (72 / 204 files) (228.8 K / 741.0 K bytes)

2025-05-13 13:48:41,097 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-detector1pipeline_0002.rmap    1.0 K bytes  (73 / 204 files) (229.8 K / 741.0 K bytes)

2025-05-13 13:48:41,142 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-darkpipeline_0002.rmap      868 bytes  (74 / 204 files) (230.8 K / 741.0 K bytes)

2025-05-13 13:48:41,179 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-darkcurrentstep_0001.rmap      591 bytes  (75 / 204 files) (231.7 K / 741.0 K bytes)

2025-05-13 13:48:41,215 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_pars-chargemigrationstep_0004.rmap    5.7 K bytes  (76 / 204 files) (232.3 K / 741.0 K bytes)

2025-05-13 13:48:41,261 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_nrm_0005.rmap      663 bytes  (77 / 204 files) (237.9 K / 741.0 K bytes)

2025-05-13 13:48:41,300 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_mask_0022.rmap    1.3 K bytes  (78 / 204 files) (238.6 K / 741.0 K bytes)

2025-05-13 13:48:41,336 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_linearity_0022.rmap      961 bytes  (79 / 204 files) (239.9 K / 741.0 K bytes)

2025-05-13 13:48:41,373 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_ipc_0007.rmap      651 bytes  (80 / 204 files) (240.9 K / 741.0 K bytes)

2025-05-13 13:48:41,420 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_gain_0011.rmap      797 bytes  (81 / 204 files) (241.5 K / 741.0 K bytes)

2025-05-13 13:48:41,456 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_flat_0023.rmap    5.9 K bytes  (82 / 204 files) (242.3 K / 741.0 K bytes)

2025-05-13 13:48:41,493 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_filteroffset_0010.rmap      853 bytes  (83 / 204 files) (248.2 K / 741.0 K bytes)

2025-05-13 13:48:41,530 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_extract1d_0007.rmap      905 bytes  (84 / 204 files) (249.0 K / 741.0 K bytes)

2025-05-13 13:48:41,582 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_drizpars_0004.rmap      519 bytes  (85 / 204 files) (249.9 K / 741.0 K bytes)

2025-05-13 13:48:41,620 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_distortion_0025.rmap    3.4 K bytes  (86 / 204 files) (250.4 K / 741.0 K bytes)

2025-05-13 13:48:41,661 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_dark_0034.rmap    7.5 K bytes  (87 / 204 files) (253.9 K / 741.0 K bytes)

2025-05-13 13:48:41,704 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_bkg_0002.rmap    2.9 K bytes  (88 / 204 files) (261.4 K / 741.0 K bytes)

2025-05-13 13:48:41,740 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_area_0014.rmap    2.7 K bytes  (89 / 204 files) (264.3 K / 741.0 K bytes)

2025-05-13 13:48:41,776 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_apcorr_0010.rmap    4.3 K bytes  (90 / 204 files) (267.0 K / 741.0 K bytes)

2025-05-13 13:48:41,812 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_abvegaoffset_0004.rmap    1.4 K bytes  (91 / 204 files) (271.3 K / 741.0 K bytes)

2025-05-13 13:48:41,849 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_niriss_0272.imap      5.8 K bytes  (92 / 204 files) (272.7 K / 741.0 K bytes)

2025-05-13 13:48:41,893 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_wfssbkg_0004.rmap    7.2 K bytes  (93 / 204 files) (278.5 K / 741.0 K bytes)

2025-05-13 13:48:41,928 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_wavelengthrange_0010.rmap      996 bytes  (94 / 204 files) (285.7 K / 741.0 K bytes)

2025-05-13 13:48:41,969 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_tsophot_0003.rmap      896 bytes  (95 / 204 files) (286.7 K / 741.0 K bytes)

2025-05-13 13:48:42,004 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_trappars_0003.rmap    1.6 K bytes  (96 / 204 files) (287.6 K / 741.0 K bytes)

2025-05-13 13:48:42,041 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_trapdensity_0003.rmap    1.6 K bytes  (97 / 204 files) (289.2 K / 741.0 K bytes)

2025-05-13 13:48:42,159 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_superbias_0019.rmap   18.9 K bytes  (98 / 204 files) (290.8 K / 741.0 K bytes)

2025-05-13 13:48:42,210 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_specwcs_0022.rmap    7.1 K bytes  (99 / 204 files) (309.7 K / 741.0 K bytes)

2025-05-13 13:48:42,255 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_sirskernel_0002.rmap      671 bytes  (100 / 204 files) (316.8 K / 741.0 K bytes)

2025-05-13 13:48:42,291 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_saturation_0011.rmap    2.8 K bytes  (101 / 204 files) (317.5 K / 741.0 K bytes)

2025-05-13 13:48:42,326 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_readnoise_0026.rmap   25.9 K bytes  (102 / 204 files) (320.3 K / 741.0 K bytes)

2025-05-13 13:48:42,373 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_psfmask_0008.rmap   28.4 K bytes  (103 / 204 files) (346.2 K / 741.0 K bytes)

2025-05-13 13:48:42,416 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_photom_0028.rmap    3.4 K bytes  (104 / 204 files) (374.6 K / 741.0 K bytes)

2025-05-13 13:48:42,454 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_persat_0005.rmap    1.6 K bytes  (105 / 204 files) (377.9 K / 741.0 K bytes)

2025-05-13 13:48:42,490 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-whitelightstep_0004.rmap    2.0 K bytes  (106 / 204 files) (379.5 K / 741.0 K bytes)

2025-05-13 13:48:42,526 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-tweakregstep_0003.rmap    4.5 K bytes  (107 / 204 files) (381.5 K / 741.0 K bytes)

2025-05-13 13:48:42,563 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-spec2pipeline_0008.rmap      984 bytes  (108 / 204 files) (386.0 K / 741.0 K bytes)

2025-05-13 13:48:42,606 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-sourcecatalogstep_0002.rmap    4.6 K bytes  (109 / 204 files) (387.0 K / 741.0 K bytes)

2025-05-13 13:48:42,644 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-resamplestep_0002.rmap      687 bytes  (110 / 204 files) (391.6 K / 741.0 K bytes)

2025-05-13 13:48:42,683 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-outlierdetectionstep_0003.rmap      940 bytes  (111 / 204 files) (392.3 K / 741.0 K bytes)

2025-05-13 13:48:42,727 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-jumpstep_0005.rmap      806 bytes  (112 / 204 files) (393.2 K / 741.0 K bytes)

2025-05-13 13:48:42,770 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-image2pipeline_0004.rmap    1.1 K bytes  (113 / 204 files) (394.0 K / 741.0 K bytes)

2025-05-13 13:48:42,817 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-detector1pipeline_0005.rmap    1.3 K bytes  (114 / 204 files) (395.2 K / 741.0 K bytes)

2025-05-13 13:48:42,862 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-darkpipeline_0002.rmap      868 bytes  (115 / 204 files) (396.4 K / 741.0 K bytes)

2025-05-13 13:48:42,899 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_pars-darkcurrentstep_0001.rmap      618 bytes  (116 / 204 files) (397.3 K / 741.0 K bytes)

2025-05-13 13:48:42,935 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_mask_0012.rmap    4.1 K bytes  (117 / 204 files) (397.9 K / 741.0 K bytes)

2025-05-13 13:48:42,971 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_linearity_0011.rmap    2.4 K bytes  (118 / 204 files) (402.1 K / 741.0 K bytes)

2025-05-13 13:48:43,017 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_ipc_0003.rmap    2.0 K bytes  (119 / 204 files) (404.5 K / 741.0 K bytes)

2025-05-13 13:48:43,062 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_gain_0016.rmap    2.1 K bytes  (120 / 204 files) (406.4 K / 741.0 K bytes)

2025-05-13 13:48:43,099 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_flat_0028.rmap   51.7 K bytes  (121 / 204 files) (408.6 K / 741.0 K bytes)

2025-05-13 13:48:43,149 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_filteroffset_0004.rmap    1.4 K bytes  (122 / 204 files) (460.2 K / 741.0 K bytes)

2025-05-13 13:48:43,192 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_extract1d_0005.rmap    1.2 K bytes  (123 / 204 files) (461.7 K / 741.0 K bytes)

2025-05-13 13:48:43,229 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_drizpars_0001.rmap      519 bytes  (124 / 204 files) (462.9 K / 741.0 K bytes)

2025-05-13 13:48:43,271 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_distortion_0033.rmap   53.4 K bytes  (125 / 204 files) (463.4 K / 741.0 K bytes)

2025-05-13 13:48:43,327 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_dark_0047.rmap   29.0 K bytes  (126 / 204 files) (516.7 K / 741.0 K bytes)

2025-05-13 13:48:43,369 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_area_0012.rmap   33.5 K bytes  (127 / 204 files) (545.7 K / 741.0 K bytes)

2025-05-13 13:48:43,413 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_apcorr_0008.rmap    4.3 K bytes  (128 / 204 files) (579.2 K / 741.0 K bytes)

2025-05-13 13:48:43,452 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_abvegaoffset_0003.rmap    1.3 K bytes  (129 / 204 files) (583.5 K / 741.0 K bytes)

2025-05-13 13:48:43,491 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_nircam_0314.imap      5.6 K bytes  (130 / 204 files) (584.8 K / 741.0 K bytes)

2025-05-13 13:48:43,535 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_wavelengthrange_0027.rmap      929 bytes  (131 / 204 files) (590.4 K / 741.0 K bytes)

2025-05-13 13:48:43,583 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_tsophot_0004.rmap      882 bytes  (132 / 204 files) (591.3 K / 741.0 K bytes)

2025-05-13 13:48:43,627 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_straymask_0009.rmap      987 bytes  (133 / 204 files) (592.2 K / 741.0 K bytes)

2025-05-13 13:48:43,672 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_specwcs_0043.rmap    5.8 K bytes  (134 / 204 files) (593.2 K / 741.0 K bytes)

2025-05-13 13:48:43,708 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_saturation_0015.rmap    1.2 K bytes  (135 / 204 files) (599.0 K / 741.0 K bytes)

2025-05-13 13:48:43,749 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_rscd_0008.rmap    1.0 K bytes  (136 / 204 files) (600.1 K / 741.0 K bytes)

2025-05-13 13:48:43,786 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_resol_0006.rmap      790 bytes  (137 / 204 files) (601.2 K / 741.0 K bytes)

2025-05-13 13:48:43,829 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_reset_0026.rmap    3.9 K bytes  (138 / 204 files) (602.0 K / 741.0 K bytes)

2025-05-13 13:48:43,874 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_regions_0034.rmap    5.2 K bytes  (139 / 204 files) (605.8 K / 741.0 K bytes)

2025-05-13 13:48:43,911 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_readnoise_0023.rmap    1.6 K bytes  (140 / 204 files) (611.0 K / 741.0 K bytes)

2025-05-13 13:48:43,950 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_psfmask_0009.rmap    2.1 K bytes  (141 / 204 files) (612.7 K / 741.0 K bytes)

2025-05-13 13:48:43,987 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_psf_0003.rmap      839 bytes  (142 / 204 files) (614.8 K / 741.0 K bytes)

2025-05-13 13:48:44,026 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_photom_0056.rmap    3.7 K bytes  (143 / 204 files) (615.6 K / 741.0 K bytes)

2025-05-13 13:48:44,069 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pathloss_0005.rmap      866 bytes  (144 / 204 files) (619.4 K / 741.0 K bytes)

2025-05-13 13:48:44,108 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-whitelightstep_0003.rmap      912 bytes  (145 / 204 files) (620.2 K / 741.0 K bytes)

2025-05-13 13:48:44,154 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-tweakregstep_0003.rmap    1.8 K bytes  (146 / 204 files) (621.2 K / 741.0 K bytes)

2025-05-13 13:48:44,190 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-spec3pipeline_0009.rmap      816 bytes  (147 / 204 files) (623.0 K / 741.0 K bytes)

2025-05-13 13:48:44,225 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-spec2pipeline_0012.rmap    1.3 K bytes  (148 / 204 files) (623.8 K / 741.0 K bytes)

2025-05-13 13:48:44,268 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-sourcecatalogstep_0003.rmap    1.9 K bytes  (149 / 204 files) (625.1 K / 741.0 K bytes)

2025-05-13 13:48:44,304 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-resamplestep_0002.rmap      677 bytes  (150 / 204 files) (627.0 K / 741.0 K bytes)

2025-05-13 13:48:44,348 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-resamplespecstep_0002.rmap      706 bytes  (151 / 204 files) (627.7 K / 741.0 K bytes)

2025-05-13 13:48:44,391 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-outlierdetectionstep_0020.rmap    3.4 K bytes  (152 / 204 files) (628.4 K / 741.0 K bytes)

2025-05-13 13:48:44,435 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-jumpstep_0011.rmap    1.6 K bytes  (153 / 204 files) (631.8 K / 741.0 K bytes)

2025-05-13 13:48:44,477 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-image2pipeline_0010.rmap    1.1 K bytes  (154 / 204 files) (633.4 K / 741.0 K bytes)

2025-05-13 13:48:44,514 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-extract1dstep_0003.rmap      807 bytes  (155 / 204 files) (634.5 K / 741.0 K bytes)

2025-05-13 13:48:44,550 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-emicorrstep_0003.rmap      796 bytes  (156 / 204 files) (635.3 K / 741.0 K bytes)

2025-05-13 13:48:44,586 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-detector1pipeline_0010.rmap    1.6 K bytes  (157 / 204 files) (636.1 K / 741.0 K bytes)

2025-05-13 13:48:44,622 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-darkpipeline_0002.rmap      860 bytes  (158 / 204 files) (637.7 K / 741.0 K bytes)

2025-05-13 13:48:44,675 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_pars-darkcurrentstep_0002.rmap      683 bytes  (159 / 204 files) (638.5 K / 741.0 K bytes)

2025-05-13 13:48:44,723 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_mrsxartcorr_0002.rmap    2.2 K bytes  (160 / 204 files) (639.2 K / 741.0 K bytes)

2025-05-13 13:48:44,761 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_mrsptcorr_0005.rmap    2.0 K bytes  (161 / 204 files) (641.4 K / 741.0 K bytes)

2025-05-13 13:48:44,797 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_mask_0026.rmap    4.3 K bytes  (162 / 204 files) (643.3 K / 741.0 K bytes)

2025-05-13 13:48:44,834 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_linearity_0018.rmap    2.8 K bytes  (163 / 204 files) (647.6 K / 741.0 K bytes)

2025-05-13 13:48:44,868 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_ipc_0008.rmap      700 bytes  (164 / 204 files) (650.4 K / 741.0 K bytes)

2025-05-13 13:48:44,911 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_gain_0013.rmap    3.9 K bytes  (165 / 204 files) (651.1 K / 741.0 K bytes)

2025-05-13 13:48:44,947 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_fringefreq_0003.rmap    1.4 K bytes  (166 / 204 files) (655.0 K / 741.0 K bytes)

2025-05-13 13:48:44,983 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_fringe_0019.rmap    3.9 K bytes  (167 / 204 files) (656.5 K / 741.0 K bytes)

2025-05-13 13:48:45,020 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_flat_0066.rmap   15.7 K bytes  (168 / 204 files) (660.4 K / 741.0 K bytes)

2025-05-13 13:48:45,057 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_filteroffset_0025.rmap    2.5 K bytes  (169 / 204 files) (676.1 K / 741.0 K bytes)

2025-05-13 13:48:45,093 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_extract1d_0020.rmap    1.4 K bytes  (170 / 204 files) (678.6 K / 741.0 K bytes)

2025-05-13 13:48:45,131 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_emicorr_0003.rmap      663 bytes  (171 / 204 files) (679.9 K / 741.0 K bytes)

2025-05-13 13:48:45,176 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_drizpars_0002.rmap      511 bytes  (172 / 204 files) (680.6 K / 741.0 K bytes)

2025-05-13 13:48:45,211 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_distortion_0040.rmap    4.9 K bytes  (173 / 204 files) (681.1 K / 741.0 K bytes)

2025-05-13 13:48:45,248 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_dark_0036.rmap    4.4 K bytes  (174 / 204 files) (686.0 K / 741.0 K bytes)

2025-05-13 13:48:45,290 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_cubepar_0017.rmap      800 bytes  (175 / 204 files) (690.4 K / 741.0 K bytes)

2025-05-13 13:48:45,326 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_area_0015.rmap      866 bytes  (176 / 204 files) (691.2 K / 741.0 K bytes)

2025-05-13 13:48:45,369 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_apcorr_0019.rmap    5.0 K bytes  (177 / 204 files) (692.0 K / 741.0 K bytes)

2025-05-13 13:48:45,407 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_abvegaoffset_0003.rmap    1.3 K bytes  (178 / 204 files) (697.0 K / 741.0 K bytes)

2025-05-13 13:48:45,443 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_miri_0437.imap        5.8 K bytes  (179 / 204 files) (698.3 K / 741.0 K bytes)

2025-05-13 13:48:45,478 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_trappars_0004.rmap      903 bytes  (180 / 204 files) (704.1 K / 741.0 K bytes)

2025-05-13 13:48:45,514 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_trapdensity_0006.rmap      930 bytes  (181 / 204 files) (705.0 K / 741.0 K bytes)

2025-05-13 13:48:45,551 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_superbias_0017.rmap    3.8 K bytes  (182 / 204 files) (706.0 K / 741.0 K bytes)

2025-05-13 13:48:45,588 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_saturation_0009.rmap      779 bytes  (183 / 204 files) (709.7 K / 741.0 K bytes)

2025-05-13 13:48:45,624 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_readnoise_0014.rmap    1.3 K bytes  (184 / 204 files) (710.5 K / 741.0 K bytes)

2025-05-13 13:48:45,668 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_photom_0014.rmap    1.1 K bytes  (185 / 204 files) (711.8 K / 741.0 K bytes)

2025-05-13 13:48:45,713 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_persat_0006.rmap      884 bytes  (186 / 204 files) (712.9 K / 741.0 K bytes)

2025-05-13 13:48:45,749 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-tweakregstep_0002.rmap      850 bytes  (187 / 204 files) (713.8 K / 741.0 K bytes)

2025-05-13 13:48:45,785 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-sourcecatalogstep_0001.rmap      636 bytes  (188 / 204 files) (714.6 K / 741.0 K bytes)

2025-05-13 13:48:45,822 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-outlierdetectionstep_0001.rmap      654 bytes  (189 / 204 files) (715.3 K / 741.0 K bytes)

2025-05-13 13:48:45,864 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-image2pipeline_0005.rmap      974 bytes  (190 / 204 files) (715.9 K / 741.0 K bytes)

2025-05-13 13:48:45,901 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-detector1pipeline_0002.rmap    1.0 K bytes  (191 / 204 files) (716.9 K / 741.0 K bytes)

2025-05-13 13:48:45,938 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_pars-darkpipeline_0002.rmap      856 bytes  (192 / 204 files) (717.9 K / 741.0 K bytes)

2025-05-13 13:48:45,974 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_mask_0023.rmap    1.1 K bytes  (193 / 204 files) (718.8 K / 741.0 K bytes)

2025-05-13 13:48:46,010 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_linearity_0015.rmap      925 bytes  (194 / 204 files) (719.8 K / 741.0 K bytes)

2025-05-13 13:48:46,056 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_ipc_0003.rmap       614 bytes  (195 / 204 files) (720.8 K / 741.0 K bytes)

2025-05-13 13:48:46,093 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_gain_0010.rmap      890 bytes  (196 / 204 files) (721.4 K / 741.0 K bytes)

2025-05-13 13:48:46,130 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_flat_0009.rmap    1.1 K bytes  (197 / 204 files) (722.3 K / 741.0 K bytes)

2025-05-13 13:48:46,174 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_distortion_0011.rmap    1.2 K bytes  (198 / 204 files) (723.4 K / 741.0 K bytes)

2025-05-13 13:48:46,209 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_dark_0017.rmap    4.3 K bytes  (199 / 204 files) (724.6 K / 741.0 K bytes)

2025-05-13 13:48:46,245 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_area_0010.rmap    1.2 K bytes  (200 / 204 files) (728.9 K / 741.0 K bytes)

2025-05-13 13:48:46,282 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_apcorr_0004.rmap    4.0 K bytes  (201 / 204 files) (730.1 K / 741.0 K bytes)

2025-05-13 13:48:46,320 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_abvegaoffset_0002.rmap    1.3 K bytes  (202 / 204 files) (734.0 K / 741.0 K bytes)

2025-05-13 13:48:46,355 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_fgs_0123.imap         5.1 K bytes  (203 / 204 files) (735.3 K / 741.0 K bytes)

2025-05-13 13:48:46,393 - CRDS - INFO -  Fetching  /home/runner/crds/mappings/jwst/jwst_1364.pmap               580 bytes  (204 / 204 files) (740.4 K / 741.0 K bytes)

2025-05-13 13:48:46,700 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:48:46,705 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf    1.8 K bytes  (1 / 1 files) (0 / 1.8 K bytes)

2025-05-13 13:48:46,742 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:48:46,755 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf    1.7 K bytes  (1 / 1 files) (0 / 1.7 K bytes)

2025-05-13 13:48:46,799 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:48:46,816 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:48:46,817 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:48:46,818 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:48:46,819 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:48:46,820 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:48:46,821 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:48:46,822 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:48:46,823 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:48:46,824 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:48:46,825 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:48:46,826 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:48:46,826 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:48:46,827 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:48:46,828 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:48:46,829 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:48:46,830 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:48:46,831 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:48:46,832 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:48:46,833 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:48:46,834 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:48:46,947 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00001_nrcalong_uncal.fits',).

2025-05-13 13:48:46,967 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:48:47,015 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00001_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:48:47,019 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits   82.4 M bytes  (1 / 8 files) (0 / 302.8 M bytes)

2025-05-13 13:48:57,102 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits   16.8 M bytes  (2 / 8 files) (82.4 M / 302.8 M bytes)

2025-05-13 13:48:57,301 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits  151.0 M bytes  (3 / 8 files) (99.1 M / 302.8 M bytes)

2025-05-13 13:49:06,429 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits   16.8 M bytes  (4 / 8 files) (250.2 M / 302.8 M bytes)

2025-05-13 13:49:06,646 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits  420.5 K bytes  (5 / 8 files) (267.0 M / 302.8 M bytes)

2025-05-13 13:49:06,719 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits   33.6 M bytes  (6 / 8 files) (267.4 M / 302.8 M bytes)

2025-05-13 13:49:07,918 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf  528.7 K bytes  (7 / 8 files) (301.0 M / 302.8 M bytes)

2025-05-13 13:49:08,011 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits    1.3 M bytes  (8 / 8 files) (301.5 M / 302.8 M bytes)

2025-05-13 13:49:08,129 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:08,130 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:08,130 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:08,131 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:08,131 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:08,132 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:08,132 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:08,132 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:08,133 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:08,133 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:08,134 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:08,135 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:08,350 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:08,358 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:08,358 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:08,360 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:08,470 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:08,488 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:08,638 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:08,649 - CRDS - INFO -  Calibration SW Found: jwst 1.18.0 (/usr/share/miniconda/lib/python3.13/site-packages/jwst-1.18.0.dist-info)

2025-05-13 13:49:08,701 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:08,811 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:08,830 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:08,885 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:08,936 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:08,955 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:08,962 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:08,976 - stpipe.Detector1Pipeline.saturation - INFO - Detected 12 saturated pixels

2025-05-13 13:49:08,977 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:08,982 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:09,095 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:09,096 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:09,214 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:09,236 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:09,274 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:09,390 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:09,409 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:09,413 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:09,413 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:09,433 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:09,460 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:09,574 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:09,605 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:09,679 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,680 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,681 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,682 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,682 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,683 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,684 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:09,725 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:09,854 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:09,854 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:09,985 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:10,008 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:10,059 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:10,059 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:10,082 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:10,204 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:10,205 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:10,314 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:10,322 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:10,323 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:10,346 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:10,354 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:10,380 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:10,388 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:10,389 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:10,808 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:10,816 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 8

2025-05-13 13:49:10,817 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.428271 sec

2025-05-13 13:49:10,820 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.498167

2025-05-13 13:49:10,823 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:10,952 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:10,953 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:11,080 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:11,123 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:11,123 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:11,146 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:11,151 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:11,152 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:11,169 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:11,230 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05994820594787598

2025-05-13 13:49:11,278 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:11,402 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:11,434 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:11,434 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:11,436 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:11,566 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:11,593 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:11,593 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:11,595 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:11,653 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong_rateints.fits

2025-05-13 13:49:11,653 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:11,654 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:11,707 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong_rate.fits

2025-05-13 13:49:11,708 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:11,708 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:11,763 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:11,767 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:11,778 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:11,795 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:11,796 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:11,796 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:11,797 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:11,799 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:11,800 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:11,801 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:11,802 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:11,803 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:11,803 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:11,804 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:11,805 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:11,806 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:11,807 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:11,808 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:11,808 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:11,810 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:11,811 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:11,814 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:11,814 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:11,947 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00002_nrcalong_uncal.fits',).

2025-05-13 13:49:11,967 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:12,015 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00002_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:12,019 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:12,020 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:12,021 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:12,021 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:12,021 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:12,022 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:12,022 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:12,022 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:12,023 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:12,023 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:12,024 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:12,024 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:12,250 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:12,258 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:12,258 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:12,260 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:12,391 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:12,406 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:12,547 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:12,557 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:12,687 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:12,702 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:12,756 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:12,809 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:12,828 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:12,836 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:12,850 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 saturated pixels

2025-05-13 13:49:12,851 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:12,855 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:12,980 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:12,981 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:13,107 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:13,123 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:13,160 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:13,287 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:13,305 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:13,309 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:13,310 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:13,329 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:13,355 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:13,484 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:13,499 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:13,570 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,571 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,572 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,572 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,573 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,573 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,574 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:13,616 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:13,735 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:13,735 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:13,859 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:13,876 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:13,925 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:13,926 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:13,946 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:14,068 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:14,068 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:14,189 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:14,197 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:14,198 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:14,216 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:14,224 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:14,249 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:14,257 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:14,258 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:14,677 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:14,680 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 14

2025-05-13 13:49:14,681 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.422699 sec

2025-05-13 13:49:14,684 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.486653

2025-05-13 13:49:14,686 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:14,810 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:14,811 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:14,933 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:14,967 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:14,967 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:14,990 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:14,996 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:14,997 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:15,013 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:15,074 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05939650535583496

2025-05-13 13:49:15,114 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:15,241 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:15,266 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:15,266 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:15,268 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:15,393 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00002_nrcalong_uncal.fits>,).

2025-05-13 13:49:15,420 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:15,420 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:15,422 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:15,477 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong_rateints.fits

2025-05-13 13:49:15,478 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:15,478 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:15,531 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong_rate.fits

2025-05-13 13:49:15,532 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:15,532 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:15,586 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:15,590 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:15,601 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:15,617 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:15,618 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:15,619 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:15,620 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:15,621 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:15,622 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:15,623 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:15,624 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:15,625 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:15,625 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:15,626 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:15,627 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:15,628 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:15,629 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:15,630 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:15,630 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:15,632 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:15,633 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:15,634 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:15,635 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:15,751 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00003_nrcalong_uncal.fits',).

2025-05-13 13:49:15,773 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:15,821 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00003_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:15,825 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:15,826 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:15,826 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:15,827 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:15,827 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:15,827 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:15,828 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:15,828 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:15,828 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:15,829 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:15,829 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:15,831 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:16,057 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:16,064 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:16,065 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:16,066 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:16,189 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:16,205 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:16,343 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:16,353 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:16,467 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:16,483 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:16,534 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:16,578 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:16,596 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:16,603 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:16,617 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 saturated pixels

2025-05-13 13:49:16,617 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:16,622 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:16,736 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:16,737 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:16,854 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:16,870 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:16,909 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:17,019 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,039 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:17,042 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:17,043 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:17,062 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:17,086 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:17,191 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,206 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:17,263 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,264 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,265 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,266 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,266 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,267 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,268 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:17,308 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:17,416 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,417 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:17,519 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,537 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:17,583 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:17,584 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:17,604 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:17,720 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,720 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:17,829 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:17,837 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:17,838 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:17,856 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:17,865 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:17,889 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:17,898 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:17,898 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:18,291 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:18,294 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 18

2025-05-13 13:49:18,294 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.396312 sec

2025-05-13 13:49:18,298 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.460578

2025-05-13 13:49:18,300 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:18,416 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:18,417 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:18,523 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:18,556 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:18,556 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:18,579 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:18,584 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:18,584 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:18,601 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:18,665 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.06341314315795898

2025-05-13 13:49:18,705 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:18,819 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:18,844 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:18,844 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:18,846 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:18,965 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00003_nrcalong_uncal.fits>,).

2025-05-13 13:49:18,992 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:18,992 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:18,994 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:19,048 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong_rateints.fits

2025-05-13 13:49:19,048 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:19,049 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:19,101 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong_rate.fits

2025-05-13 13:49:19,102 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:19,102 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:19,158 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:19,161 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:19,172 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:19,188 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:19,189 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:19,190 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:19,191 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:19,192 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:19,193 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:19,194 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:19,195 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:19,196 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:19,197 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:19,198 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:19,199 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:19,199 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:19,200 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:19,202 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:19,202 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:19,204 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:19,205 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:19,206 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:19,207 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:19,326 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00004_nrcalong_uncal.fits',).

2025-05-13 13:49:19,349 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:19,397 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00004_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:19,400 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:19,401 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:19,401 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:19,402 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:19,403 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:19,403 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:19,404 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:19,404 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:19,404 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:19,405 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:19,405 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:19,406 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:19,628 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:19,636 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:19,636 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:19,638 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:19,756 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:19,772 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:19,912 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:19,922 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:20,032 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:20,048 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:20,100 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,152 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,172 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:20,179 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:20,193 - stpipe.Detector1Pipeline.saturation - INFO - Detected 9 saturated pixels

2025-05-13 13:49:20,194 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:20,198 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:20,319 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:20,320 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:20,439 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:20,455 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:20,492 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:20,610 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:20,628 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:20,632 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:20,632 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:20,652 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:20,676 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:20,790 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:20,806 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:20,863 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,864 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,864 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,865 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,866 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,866 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,867 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:20,907 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:21,028 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:21,029 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:21,141 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:21,160 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:21,211 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:21,211 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:21,231 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:21,348 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:21,349 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:21,448 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:21,455 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:21,456 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:21,473 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:21,482 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:21,506 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:21,514 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:21,515 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:21,919 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:21,922 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 7

2025-05-13 13:49:21,923 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.407917 sec

2025-05-13 13:49:21,926 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.470768

2025-05-13 13:49:21,928 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:22,041 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:22,042 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:22,150 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:22,183 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:22,184 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:22,207 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:22,212 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:22,213 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:22,229 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:22,289 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05948019027709961

2025-05-13 13:49:22,329 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:22,447 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:22,472 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:22,473 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:22,475 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:22,594 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00004_nrcalong_uncal.fits>,).

2025-05-13 13:49:22,621 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:22,621 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:22,623 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:22,677 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong_rateints.fits

2025-05-13 13:49:22,677 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:22,678 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:22,730 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong_rate.fits

2025-05-13 13:49:22,730 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:22,731 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:22,785 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:22,789 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:22,800 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:22,816 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:22,817 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:22,818 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:22,819 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:22,820 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:22,821 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:22,822 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:22,823 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:22,824 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:22,826 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:22,826 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:22,827 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:22,829 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:22,829 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:22,830 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:22,831 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:22,833 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:22,834 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:22,835 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:22,836 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:22,963 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00005_nrcalong_uncal.fits',).

2025-05-13 13:49:22,985 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:23,032 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00005_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:23,036 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:23,037 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:23,037 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:23,038 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:23,039 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:23,039 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:23,040 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:23,040 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:23,041 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:23,041 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:23,041 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:23,042 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:23,260 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:23,269 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:23,269 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:23,271 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:23,389 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:23,404 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:23,537 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:23,547 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:23,669 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:23,685 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:23,742 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:23,792 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:23,811 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:23,818 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:23,831 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 saturated pixels

2025-05-13 13:49:23,832 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:23,836 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:23,953 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:23,954 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:24,069 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,084 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:24,121 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:24,241 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,260 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:24,264 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:24,264 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:24,283 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:24,309 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:24,431 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,447 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:24,515 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,516 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,517 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,517 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,518 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,518 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,520 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:24,560 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:24,680 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,681 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:24,794 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,810 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:24,857 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:24,858 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:24,877 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:24,989 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:24,989 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:25,091 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:25,099 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:25,099 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:25,118 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:25,126 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:25,149 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:25,157 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:25,158 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:25,567 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:25,570 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 8

2025-05-13 13:49:25,571 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.412805 sec

2025-05-13 13:49:25,574 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.475244

2025-05-13 13:49:25,576 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:25,690 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:25,690 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:25,802 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:25,837 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:25,837 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:25,860 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:25,865 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:25,866 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:25,883 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:25,944 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05973958969116211

2025-05-13 13:49:25,984 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:26,099 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:26,124 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:26,124 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:26,126 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:26,239 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00005_nrcalong_uncal.fits>,).

2025-05-13 13:49:26,265 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:26,265 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:26,267 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:26,321 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong_rateints.fits

2025-05-13 13:49:26,322 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:26,323 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:26,377 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong_rate.fits

2025-05-13 13:49:26,378 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:26,378 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:26,433 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:26,437 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:26,448 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:26,463 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:26,464 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:26,465 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:26,466 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:26,467 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:26,468 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:26,469 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:26,470 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:26,471 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:26,472 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:26,473 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:26,473 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:26,474 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:26,475 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:26,476 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:26,477 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:26,478 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:26,479 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:26,480 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:26,481 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:26,599 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00006_nrcalong_uncal.fits',).

2025-05-13 13:49:26,621 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:26,668 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00006_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:26,672 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:26,672 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:26,673 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:26,673 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:26,674 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:26,674 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:26,675 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:26,675 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:26,675 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:26,676 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:26,676 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:26,677 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:26,892 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:26,900 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:26,900 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:26,902 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:27,020 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:27,036 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:27,170 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:27,180 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:27,300 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:27,316 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:27,370 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:27,419 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:27,439 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:27,446 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:27,460 - stpipe.Detector1Pipeline.saturation - INFO - Detected 14 saturated pixels

2025-05-13 13:49:27,461 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:27,465 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:27,584 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:27,584 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:27,695 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:27,711 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:27,748 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:27,870 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:27,888 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:27,892 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:27,893 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:27,911 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:27,937 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:28,056 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:28,072 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:28,141 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,141 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,142 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,143 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,144 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,144 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,145 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:28,186 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:28,310 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:28,311 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:28,429 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:28,445 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:28,492 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:28,493 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:28,513 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:28,633 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:28,634 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:28,749 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:28,758 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:28,758 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:28,777 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:28,785 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:28,810 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:28,818 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:28,819 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:29,220 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:29,223 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 11

2025-05-13 13:49:29,224 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.404765 sec

2025-05-13 13:49:29,227 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.469227

2025-05-13 13:49:29,229 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:29,349 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:29,350 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:29,452 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:29,485 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:29,486 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:29,508 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:29,513 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:29,514 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:29,531 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:29,591 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05979800224304199

2025-05-13 13:49:29,631 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:29,753 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:29,778 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:29,779 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:29,781 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:29,894 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00006_nrcalong_uncal.fits>,).

2025-05-13 13:49:29,920 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:29,921 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:29,923 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:29,977 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong_rateints.fits

2025-05-13 13:49:29,978 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:29,979 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:30,030 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong_rate.fits

2025-05-13 13:49:30,030 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:30,031 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:30,084 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:30,088 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:30,099 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:30,115 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:30,116 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:30,117 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:30,118 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:30,119 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:30,120 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:30,121 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:30,122 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:30,123 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:30,124 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:30,124 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:30,125 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:30,126 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:30,127 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:30,128 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:30,129 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:30,130 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:30,131 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:30,132 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:30,133 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:30,250 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00007_nrcalong_uncal.fits',).

2025-05-13 13:49:30,273 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:30,319 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00007_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:30,323 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:30,324 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:30,324 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:30,324 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:30,325 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:30,326 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:30,326 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:30,327 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:30,327 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:30,328 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:30,329 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:30,329 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:30,538 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:30,545 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:30,546 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:30,547 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:30,655 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:30,670 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:30,806 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:30,820 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:30,949 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:30,965 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:31,017 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,073 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,094 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:31,101 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:31,115 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 saturated pixels

2025-05-13 13:49:31,116 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:31,120 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:31,239 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:31,240 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:31,359 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:31,375 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:31,414 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:31,536 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:31,556 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:31,560 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:31,560 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:31,580 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:31,606 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:31,725 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:31,741 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:31,806 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,807 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,807 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,808 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,808 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,809 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,810 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:31,851 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:31,973 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:31,974 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:32,094 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:32,110 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:32,157 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:32,158 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:32,180 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:32,301 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:32,302 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:32,420 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:32,428 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:32,428 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:32,447 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:32,456 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:32,479 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:32,487 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:32,488 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:32,883 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:32,885 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 1

2025-05-13 13:49:32,886 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.397799 sec

2025-05-13 13:49:32,889 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.460868

2025-05-13 13:49:32,891 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:33,015 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:33,016 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:33,138 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:33,172 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:33,173 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:33,195 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:33,200 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:33,201 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:33,219 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:33,279 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.060042381286621094

2025-05-13 13:49:33,319 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:33,438 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:33,463 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:33,463 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:33,465 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:33,589 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00007_nrcalong_uncal.fits>,).

2025-05-13 13:49:33,615 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:33,616 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:33,618 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:33,671 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong_rateints.fits

2025-05-13 13:49:33,671 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:33,672 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:33,725 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong_rate.fits

2025-05-13 13:49:33,725 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:33,726 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:33,781 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:33,785 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:33,796 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:33,811 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:33,812 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:33,813 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:33,814 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:33,815 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:33,816 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:33,817 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:33,818 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:33,819 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:33,820 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:33,820 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:33,821 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:33,822 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:33,823 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:33,824 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:33,825 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:33,826 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:33,827 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:33,830 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:33,831 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:33,943 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00008_nrcalong_uncal.fits',).

2025-05-13 13:49:33,964 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:34,011 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00008_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:34,014 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:34,015 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:34,016 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:34,016 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:34,017 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:34,017 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:34,017 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:34,018 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:34,018 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:34,020 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:34,020 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:34,021 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:34,228 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:34,236 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:34,237 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:34,238 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:34,354 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:34,369 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:34,527 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:34,538 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:34,660 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:34,676 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:34,731 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:34,783 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:34,803 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:34,811 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:34,824 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 saturated pixels

2025-05-13 13:49:34,825 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:34,830 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:34,953 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:34,954 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:35,081 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:35,097 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:35,135 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:35,258 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:35,276 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:35,280 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:35,281 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:35,300 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:35,326 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:35,444 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:35,461 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:35,530 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,531 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,532 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,533 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,533 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,534 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,534 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:35,575 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:35,707 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:35,708 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:35,834 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:35,851 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:35,898 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:35,899 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:35,919 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:36,038 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:36,039 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:36,167 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:36,175 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:36,176 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:36,194 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:36,203 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:36,226 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:36,234 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:36,234 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:36,638 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:36,641 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 3

2025-05-13 13:49:36,642 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.407411 sec

2025-05-13 13:49:36,645 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.469576

2025-05-13 13:49:36,647 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:36,773 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:36,774 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:36,902 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:36,937 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:36,937 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:36,959 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:36,965 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:36,965 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:36,983 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:37,044 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05944681167602539

2025-05-13 13:49:37,084 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:37,202 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:37,227 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:37,227 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:37,230 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:37,349 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00008_nrcalong_uncal.fits>,).

2025-05-13 13:49:37,375 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:37,376 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:37,378 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:37,431 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong_rateints.fits

2025-05-13 13:49:37,432 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:37,433 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:37,485 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong_rate.fits

2025-05-13 13:49:37,486 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:37,486 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:37,540 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:37,544 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:37,555 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:37,571 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:37,572 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:37,573 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:37,574 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:37,575 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:37,576 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:37,578 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:37,579 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:37,580 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:37,580 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:37,581 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:37,582 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:37,583 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:37,584 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:37,585 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:37,585 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:37,587 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:37,588 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:37,590 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:37,591 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:37,714 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386001001_0310e_00009_nrcalong_uncal.fits',).

2025-05-13 13:49:37,734 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:37,783 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00009_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:37,786 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:37,787 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:37,788 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:37,788 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:37,788 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:37,789 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:37,789 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:37,790 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:37,790 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:37,791 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:37,792 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:37,793 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:38,006 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:38,014 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:38,014 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:38,016 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:38,142 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:38,158 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:38,294 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:38,305 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:38,436 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:38,451 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:38,501 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:38,550 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:38,570 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:38,577 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:38,591 - stpipe.Detector1Pipeline.saturation - INFO - Detected 9 saturated pixels

2025-05-13 13:49:38,592 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:38,596 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:38,707 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:38,709 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:38,829 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:38,845 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:38,883 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:39,015 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,033 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:39,037 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:39,037 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:39,056 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:39,082 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:39,210 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,226 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:39,291 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,292 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,293 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,294 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,294 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,295 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,295 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:39,338 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:39,460 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,460 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:39,586 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,602 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:39,650 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=4, nframes=8, groupgap=2

2025-05-13 13:49:39,651 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:39,670 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:39,801 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,801 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:39,915 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:39,923 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:39,923 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:39,942 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:39,951 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:39,975 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:39,983 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:39,984 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:40,395 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:40,398 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 11

2025-05-13 13:49:40,399 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.415031 sec

2025-05-13 13:49:40,402 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.479333

2025-05-13 13:49:40,404 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:40,530 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:40,531 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:40,659 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 4, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:40,694 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:40,694 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:40,717 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:40,723 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:40,723 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:40,739 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:40,799 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.05909848213195801

2025-05-13 13:49:40,840 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:40,968 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:40,993 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:40,994 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:40,996 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:41,122 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00009_nrcalong_uncal.fits>,).

2025-05-13 13:49:41,149 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:41,150 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:41,152 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:41,206 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong_rateints.fits

2025-05-13 13:49:41,207 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:41,208 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:41,260 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong_rate.fits

2025-05-13 13:49:41,261 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:41,261 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:41,325 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:41,328 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:41,339 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:41,356 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:41,357 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:41,358 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:41,359 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:41,359 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:41,361 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:41,361 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:41,363 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:41,363 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:41,364 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:41,365 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:41,366 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:41,367 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:41,367 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:41,368 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:41,369 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:41,371 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:41,372 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:41,373 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:41,374 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:41,494 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386002001_0310a_00001_nrcalong_uncal.fits',).

2025-05-13 13:49:41,516 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:41,566 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386002001_0310a_00001_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:41,570 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:41,570 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:41,571 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:41,572 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:41,572 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:41,573 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:41,573 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:41,574 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:41,574 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:41,574 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:41,575 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:41,576 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:41,805 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:41,812 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:41,813 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:41,814 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:41,922 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:41,938 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:42,080 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:42,091 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:42,216 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:42,232 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:42,282 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:42,332 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:42,353 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:42,360 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:42,406 - stpipe.Detector1Pipeline.saturation - INFO - Detected 45 saturated pixels

2025-05-13 13:49:42,408 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:42,412 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:42,534 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:42,535 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:42,658 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:42,674 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:42,716 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:42,839 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:42,859 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:42,863 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:42,864 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:42,885 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:42,911 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:43,036 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:43,053 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:43,121 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,122 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,122 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,123 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,124 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,124 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,125 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:43,192 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:43,312 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:43,313 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:43,434 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:43,450 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:43,499 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=15, nframes=8, groupgap=12

2025-05-13 13:49:43,499 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:43,500 - stpipe.Detector1Pipeline.dark_current - WARNING - Not enough data in dark reference file to match to science data.

2025-05-13 13:49:43,500 - stpipe.Detector1Pipeline.dark_current - WARNING - Input will be returned without subtracting dark current.

2025-05-13 13:49:43,507 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:43,632 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:43,633 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:43,755 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:43,764 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:43,764 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:43,784 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:43,792 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:43,815 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:43,828 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:43,829 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:44,276 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:44,289 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 82

2025-05-13 13:49:44,289 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.460825 sec

2025-05-13 13:49:44,295 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.530838

2025-05-13 13:49:44,297 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:44,420 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:44,421 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:44,533 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 15, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:44,568 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:44,568 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:44,593 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:44,598 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:44,599 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:44,636 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:44,835 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.1981053352355957

2025-05-13 13:49:44,875 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:44,993 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:45,018 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:45,019 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:45,021 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:45,133 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386002001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:45,158 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:45,159 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:45,161 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:45,216 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong_rateints.fits

2025-05-13 13:49:45,217 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:45,217 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:45,269 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong_rate.fits

2025-05-13 13:49:45,270 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:45,270 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:45,326 - CRDS - ERROR -  Error determining best reference for 'pars-darkcurrentstep'  =   No match found.

2025-05-13 13:49:45,329 - stpipe - INFO - PARS-JUMPSTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-jumpstep_0003.asdf

2025-05-13 13:49:45,340 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-detector1pipeline_0003.asdf

2025-05-13 13:49:45,356 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.

2025-05-13 13:49:45,357 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.

2025-05-13 13:49:45,358 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.

2025-05-13 13:49:45,359 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.

2025-05-13 13:49:45,360 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.

2025-05-13 13:49:45,361 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.

2025-05-13 13:49:45,362 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.

2025-05-13 13:49:45,363 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.

2025-05-13 13:49:45,364 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.

2025-05-13 13:49:45,365 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.

2025-05-13 13:49:45,366 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.

2025-05-13 13:49:45,367 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.

2025-05-13 13:49:45,368 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.

2025-05-13 13:49:45,369 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.

2025-05-13 13:49:45,370 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.

2025-05-13 13:49:45,371 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.

2025-05-13 13:49:45,373 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.

2025-05-13 13:49:45,374 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - CleanFlickerNoiseStep instance created.

2025-05-13 13:49:45,375 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.

2025-05-13 13:49:45,376 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.

2025-05-13 13:49:45,503 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('./nrc_coron_demo_data/uncal/jw01386003001_0310a_00001_nrcalong_uncal.fits',).

2025-05-13 13:49:45,524 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage1
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_calibrated_ramp: False
  steps:
    group_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dq_init:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    emicorr:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: sequential
      nints_to_phase: None
      nbins: None
      scale_reference: True
      onthefly_corr_freq: None
      use_n_cycles: 3
      fit_ints_separately: False
      user_supplied_reffile: None
      save_intermediate_results: False
    saturation:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      n_pix_grow_sat: 1
      use_readpatt: True
    ipc:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
    superbias:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    refpix:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      odd_even_columns: True
      use_side_ref_pixels: True
      side_smoothing_length: 11
      side_gain: 1.0
      odd_even_rows: True
      ovr_corr_mitigation_ftr: 3.0
      preserve_irs2_refpix: False
      irs2_mean_subtraction: False
      refpix_algorithm: median
      sigreject: 4.0
      gaussmooth: 1.0
      halfwidth: 30
    rscd:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      type: baseline
    firstframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      bright_use_group1: False
    lastframe:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    linearity:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    dark_current:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      dark_output: None
      average_dark_current: None
    reset:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    persistence:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      input_trapsfilled: ''
      flag_pers_cutoff: 40.0
      save_persistence: False
      save_trapsfilled: True
      modify_input: False
    charge_migration:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      signal_threshold: 25000.0
    jump:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      rejection_threshold: 4.0
      three_group_rejection_threshold: 6.0
      four_group_rejection_threshold: 5.0
      maximum_cores: half
      flag_4_neighbors: True
      max_jump_to_flag_neighbors: 1000
      min_jump_to_flag_neighbors: 30
      after_jump_flag_dn1: 0
      after_jump_flag_time1: 0
      after_jump_flag_dn2: 0
      after_jump_flag_time2: 0
      expand_large_events: True
      min_sat_area: 1
      min_jump_area: 5
      expand_factor: 2
      use_ellipses: False
      sat_required_snowball: True
      min_sat_radius_extend: 2.5
      sat_expand: 2
      edge_size: 25
      mask_snowball_core_next_int: True
      snowball_time_masked_next_int: 4000
      find_showers: False
      max_shower_amplitude: 4.0
      extend_snr_threshold: 0.0
      extend_min_area: 0
      extend_inner_radius: 0
      extend_outer_radius: 0.0
      extend_ellipse_expand_ratio: 0.0
      time_masked_after_shower: 0
      min_diffs_single_pass: 10
      max_extended_radius: 200
      minimum_groups: 3
      minimum_sigclip_groups: 100
      only_use_ints: True
    clean_flicker_noise:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      fit_method: median
      fit_by_channel: False
      background_method: median
      background_box_size: None
      mask_science_regions: False
      apply_flat_field: False
      n_sigma: 2.0
      fit_histogram: False
      single_mask: True
      user_mask: None
      save_mask: False
      save_background: False
      save_noise: False
    ramp_fit:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      algorithm: OLS_C
      int_name: ''
      save_opt: False
      opt_name: ''
      suppress_one_group: True
      firstgroup: None
      lastgroup: None
      maximum_cores: '1'
    gain_scale:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''

2025-05-13 13:49:45,575 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01386003001_0310a_00001_nrcalong_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'sirskernel', 'superbias']

2025-05-13 13:49:45,578 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits'.

2025-05-13 13:49:45,579 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits'.

2025-05-13 13:49:45,579 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits'.

2025-05-13 13:49:45,580 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits'.

2025-05-13 13:49:45,581 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits'.

2025-05-13 13:49:45,581 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.

2025-05-13 13:49:45,582 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.

2025-05-13 13:49:45,582 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.

2025-05-13 13:49:45,583 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits'.

2025-05-13 13:49:45,583 - stpipe.Detector1Pipeline - INFO - Prefetch for SIRSKERNEL reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_sirskernel_0001.asdf'.

2025-05-13 13:49:45,584 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits'.

2025-05-13 13:49:45,585 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...

2025-05-13 13:49:45,808 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:45,816 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed

2025-05-13 13:49:45,817 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped

2025-05-13 13:49:45,818 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done

2025-05-13 13:49:45,945 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:45,961 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_mask_0076.fits

2025-05-13 13:49:46,096 - stpipe.Detector1Pipeline.dq_init - INFO - Extracting mask subarray to match science data

2025-05-13 13:49:46,107 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done

2025-05-13 13:49:46,236 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:46,252 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_saturation_0097.fits

2025-05-13 13:49:46,302 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword RESERVED_4 does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:46,351 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNRELIABLE_RESET does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:46,372 - stpipe.Detector1Pipeline.saturation - INFO - Extracting reference file subarray to match science data

2025-05-13 13:49:46,379 - stpipe.Detector1Pipeline.saturation - INFO - Using read_pattern with nframes 8

2025-05-13 13:49:46,425 - stpipe.Detector1Pipeline.saturation - INFO - Detected 48 saturated pixels

2025-05-13 13:49:46,426 - stpipe.Detector1Pipeline.saturation - INFO - Detected 0 A/D floor pixels

2025-05-13 13:49:46,430 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done

2025-05-13 13:49:46,565 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:46,565 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.

2025-05-13 13:49:46,689 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:46,705 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_superbias_0229.fits

2025-05-13 13:49:46,748 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done

2025-05-13 13:49:46,869 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:46,888 - stpipe.Detector1Pipeline.refpix - INFO - NIR subarray data

2025-05-13 13:49:46,892 - stpipe.Detector1Pipeline.refpix - INFO - Single readout amplifier used

2025-05-13 13:49:46,892 - stpipe.Detector1Pipeline.refpix - INFO - No valid reference pixels.  This step will have no effect.

2025-05-13 13:49:46,911 - stpipe.Detector1Pipeline.refpix - INFO - Processing the zero frame

2025-05-13 13:49:46,936 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done

2025-05-13 13:49:47,059 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:47,075 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_linearity_0052.fits

2025-05-13 13:49:47,130 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_DO_NOT_USE does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,131 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_LIN_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,132 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_BAD_LIN_FIT does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,132 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_NO_WELL_SAMP does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,133 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MODEL_FIT_FAIL does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,133 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_WELL_NOT_DEFINED does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,134 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UAZ_MASTER_MASK does not correspond to an existing DQ mnemonic, so will be ignored

2025-05-13 13:49:47,199 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done

2025-05-13 13:49:47,328 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:47,329 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.

2025-05-13 13:49:47,450 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:47,466 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_dark_0415.fits

2025-05-13 13:49:47,515 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=2, ngroups=15, nframes=8, groupgap=12

2025-05-13 13:49:47,516 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=100, nframes=1, groupgap=0

2025-05-13 13:49:47,516 - stpipe.Detector1Pipeline.dark_current - WARNING - Not enough data in dark reference file to match to science data.

2025-05-13 13:49:47,517 - stpipe.Detector1Pipeline.dark_current - WARNING - Input will be returned without subtracting dark current.

2025-05-13 13:49:47,520 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done

2025-05-13 13:49:47,647 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:47,648 - stpipe.Detector1Pipeline.charge_migration - INFO - Step skipped.

2025-05-13 13:49:47,774 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:47,783 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 4 sigma

2025-05-13 13:49:47,783 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = half

2025-05-13 13:49:47,803 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:47,812 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:47,834 - stpipe.Detector1Pipeline.jump - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:47,847 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method

2025-05-13 13:49:47,848 - stpipe.Detector1Pipeline.jump - INFO - Creating 2 processes for jump detection 

2025-05-13 13:49:48,292 - stpipe.Detector1Pipeline.jump - INFO - Flagging Snowballs

2025-05-13 13:49:48,301 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 87

2025-05-13 13:49:48,301 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 0.453598 sec

2025-05-13 13:49:48,307 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 0.523877

2025-05-13 13:49:48,309 - stpipe.Detector1Pipeline.jump - INFO - Step jump done

2025-05-13 13:49:48,428 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step clean_flicker_noise running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:48,429 - stpipe.Detector1Pipeline.clean_flicker_noise - INFO - Step skipped.

2025-05-13 13:49:48,545 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(2, 15, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:48,580 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_readnoise_0284.fits

2025-05-13 13:49:48,580 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_gain_0097.fits

2025-05-13 13:49:48,602 - stpipe.Detector1Pipeline.ramp_fit - INFO - Extracting gain subarray to match science data

2025-05-13 13:49:48,608 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = OLS_C

2025-05-13 13:49:48,609 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal

2025-05-13 13:49:48,641 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of multiprocessing slices: 1

2025-05-13 13:49:48,840 - stpipe.Detector1Pipeline.ramp_fit - INFO - Ramp Fitting C Time: 0.19729900360107422

2025-05-13 13:49:48,879 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done

2025-05-13 13:49:48,997 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:49,021 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:49,022 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:49,024 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:49,145 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(2, 320, 320) from jw01386003001_0310a_00001_nrcalong_uncal.fits>,).

2025-05-13 13:49:49,171 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file

2025-05-13 13:49:49,172 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped

2025-05-13 13:49:49,174 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done

2025-05-13 13:49:49,227 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong_rateints.fits

2025-05-13 13:49:49,228 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1

2025-05-13 13:49:49,229 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:49,280 - stpipe.Detector1Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong_rate.fits

2025-05-13 13:49:49,280 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done

2025-05-13 13:49:49,281 - stpipe - INFO - Results used jwst version: 1.18.0

# Print out the time benchmark
time1 = time.perf_counter()
print(f"Runtime so far: {time1 - time0:0.0f} seconds")
print(f"Runtime for Detector1: {time1 - time_det1:0.0f} seconds")

Runtime so far: 89 seconds
Runtime for Detector1: 72 seconds

Exploring the data#

Identify *_rateints.fits files and verify which pipeline steps were run and which calibration reference files were applied.

The header contains information about which calibration steps were completed and skipped and which reference files were used to process the data.

if dodet1:
    # find rate files
    rate_files = sorted(glob.glob(os.path.join(det1_dir, '*_rateints.fits')))

    # Read in file as datamodel
    rate_f = datamodels.open(rate_files[0])

    # Check which steps were run
    rate_f.meta.cal_step.instance

{'charge_migration': 'SKIPPED',
 'clean_flicker_noise': 'SKIPPED',
 'dark_sub': 'COMPLETE',
 'dq_init': 'COMPLETE',
 'gain_scale': 'SKIPPED',
 'group_scale': 'SKIPPED',
 'ipc': 'SKIPPED',
 'jump': 'COMPLETE',
 'linearity': 'COMPLETE',
 'persistence': 'SKIPPED',
 'ramp_fit': 'COMPLETE',
 'refpix': 'COMPLETE',
 'saturation': 'COMPLETE',
 'superbias': 'COMPLETE'}

For this particular rate file, show which reference files were used to calibrate the dataset. Note that these files will be different for each NIRCam detector.

if dodet1:
    rate_f.meta.ref_file.instance

{'crds': {'context_used': 'jwst_1364.pmap', 'sw_version': '12.1.5'},
 'dark': {'name': 'crds://jwst_nircam_dark_0415.fits'},
 'gain': {'name': 'crds://jwst_nircam_gain_0097.fits'},
 'linearity': {'name': 'crds://jwst_nircam_linearity_0052.fits'},
 'mask': {'name': 'crds://jwst_nircam_mask_0076.fits'},
 'readnoise': {'name': 'crds://jwst_nircam_readnoise_0284.fits'},
 'saturation': {'name': 'crds://jwst_nircam_saturation_0097.fits'},
 'superbias': {'name': 'crds://jwst_nircam_superbias_0229.fits'}}

6. Image2 Pipeline#

In the Image2 stage of the science calibration pipeline, calibrated unrectified data products are created (*_cal.fits or *_calints.fits files, depending on whether the input files are *_rate.fits or *_rateints.fits). For the coronagraphy pipeline, we use the _rateints.fits files as input.

In this pipeline processing stage, the world coordinate system (WCS) is assigned, the data are flat fielded, and a photometric calibration is applied to convert from units of countrate (ADU/s) to surface brightness (MJy/sr).

time_image2 = time.perf_counter()

# Set up a dictionary to define how the Image2 pipeline should be configured.

# Boilerplate dictionary setup
image2dict = {}
image2dict['assign_wcs'], image2dict['flat_field'] = {}, {}
image2dict['photom'], image2dict['resample'] = {}, {}

# Overrides for whether or not certain steps should be skipped (example)
#image2dict['resample']['skip'] = False

# Overrides for various reference files
# Files should be in the base local directory or provide full path
#image2dict['assign_wcs']['override_distortion'] = 'myfile.asdf'  # Spatial distortion (ASDF file)
#image2dict['assign_wcs']['override_filteroffset'] = 'myfile.asdf'  # Imager filter offsets (ASDF file)
#image2dict['assign_wcs']['override_specwcs'] = 'myfile.asdf'  # Spectral distortion (ASDF file)
#image2dict['assign_wcs']['override_wavelengthrange'] = 'myfile.asdf'  # Wavelength channel mapping (ASDF file)
#image2dict['flat_field']['override_flat'] = 'myfile.fits'  # Pixel flatfield
#image2dict['photom']['override_photom'] = 'myfile.fits'  # Photometric calibration array

Find and sort all of the input files, ensuring use of absolute paths.

sstring = os.path.join(det1_dir, 'jw*rateints.fits')  # Use files from the detector1 output folder
rate_files = sorted(glob.glob(sstring))
rate_files = [os.path.abspath(fname) for fname in rate_files]

print(f"Found  {len(rate_files)} science files")

Found  11 science files

# List rate files
rate_files

['/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong_rateints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong_rateints.fits']

Run the Image2 pipeline on all of the rateints files.

# Run Image2 stage of pipeline, specifying:
# output directory to save *_calints.fits files
# save_results flag set to True so the calints files are saved

if doimage2:
    for rate in rate_files:
        cal_result = Image2Pipeline.call(rate, output_dir=image2_dir, steps=image2dict, save_results=True)
else:
    print("Skipping Image2 processing.")

2025-05-13 13:49:49,406 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf    1.1 K bytes  (1 / 1 files) (0 / 1.1 K bytes)

2025-05-13 13:49:49,443 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:49:49,452 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf    1.7 K bytes  (1 / 1 files) (0 / 1.7 K bytes)

2025-05-13 13:49:49,491 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:49:49,503 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:49:49,505 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:49:49,506 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:49:49,507 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:49:49,508 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:49:49,509 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:49:49,631 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong_rateints.fits',).

2025-05-13 13:49:49,638 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:49:49,680 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00001_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:49:49,684 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits   16.8 M bytes  (1 / 5 files) (0 / 67.2 M bytes)

2025-05-13 13:49:51,551 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf   14.6 K bytes  (2 / 5 files) (16.8 M / 67.2 M bytes)

2025-05-13 13:49:51,601 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf   11.4 K bytes  (3 / 5 files) (16.8 M / 67.2 M bytes)

2025-05-13 13:49:51,654 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits   50.4 M bytes  (4 / 5 files) (16.8 M / 67.2 M bytes)

2025-05-13 13:49:56,529 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits   23.0 K bytes  (5 / 5 files) (67.2 M / 67.2 M bytes)

2025-05-13 13:49:56,580 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:49:56,581 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:49:56,581 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:49:56,582 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:49:56,582 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:49:56,583 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:49:56,583 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:49:56,583 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:49:56,584 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:49:56,584 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:49:56,585 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:49:56,585 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:49:56,585 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:49:56,586 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:49:56,586 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:49:56,587 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:49:56,587 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:49:56,589 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:49:56,590 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:49:56,590 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:49:56,590 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:49:56,591 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:49:56,592 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong

2025-05-13 13:49:56,592 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong_rateints.fits ...

2025-05-13 13:49:56,752 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:56,978 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562480777 -42.102374618 209.569564741 -42.104280765 209.572074004 -42.099098525 209.564991976 -42.097177654

2025-05-13 13:49:56,979 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562480777 -42.102374618 209.569564741 -42.104280765 209.572074004 -42.099098525 209.564991976 -42.097177654

2025-05-13 13:49:56,980 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:49:57,011 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:49:57,138 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:57,225 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:49:57,226 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:49:57,226 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:49:57,227 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:49:57,251 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:49:57,268 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:49:57,393 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:57,421 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:49:57,421 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:49:57,446 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:49:57,446 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:49:57,447 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:49:57,447 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:49:57,447 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:49:57,479 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:49:57,479 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:49:57,481 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:49:57,488 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:49:57,489 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00001_nrcalong

2025-05-13 13:49:57,490 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:49:57,490 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:57,590 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_calints.fits

2025-05-13 13:49:57,591 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:49:57,592 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:57,636 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:49:57,644 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:49:57,656 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:49:57,657 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:49:57,658 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:49:57,659 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:49:57,660 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:49:57,661 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:49:57,791 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong_rateints.fits',).

2025-05-13 13:49:57,799 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:49:57,841 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00002_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:49:57,845 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:49:57,846 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:49:57,846 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:49:57,847 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:49:57,847 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:49:57,847 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:49:57,848 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:49:57,849 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:49:57,849 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:49:57,850 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:49:57,850 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:49:57,850 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:49:57,851 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:49:57,851 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:49:57,851 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:49:57,852 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:49:57,852 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:49:57,853 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:49:57,853 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:49:57,854 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:49:57,854 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:49:57,855 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:49:57,855 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong

2025-05-13 13:49:57,856 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong_rateints.fits ...

2025-05-13 13:49:58,026 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:58,240 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562473878 -42.102372777 209.569557841 -42.104278927 209.572067106 -42.099096688 209.564985080 -42.097175814

2025-05-13 13:49:58,241 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562473878 -42.102372777 209.569557841 -42.104278927 209.572067106 -42.099096688 209.564985080 -42.097175814

2025-05-13 13:49:58,242 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:49:58,273 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:49:58,397 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:58,490 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:49:58,491 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:49:58,491 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:49:58,492 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:49:58,515 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:49:58,532 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:49:58,672 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:58,695 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:49:58,695 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:49:58,719 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:49:58,720 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:49:58,721 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:49:58,721 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:49:58,722 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:49:58,751 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:49:58,751 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:49:58,753 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:49:58,760 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:49:58,761 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00002_nrcalong

2025-05-13 13:49:58,762 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:49:58,763 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:49:58,859 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_calints.fits

2025-05-13 13:49:58,859 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:49:58,860 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:49:58,906 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:49:58,913 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:49:58,925 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:49:58,926 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:49:58,927 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:49:58,928 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:49:58,929 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:49:58,930 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:49:59,051 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong_rateints.fits',).

2025-05-13 13:49:59,059 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:49:59,101 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00003_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:49:59,105 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:49:59,106 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:49:59,106 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:49:59,107 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:49:59,107 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:49:59,108 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:49:59,109 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:49:59,109 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:49:59,110 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:49:59,110 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:49:59,111 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:49:59,111 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:49:59,111 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:49:59,112 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:49:59,112 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:49:59,112 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:49:59,113 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:49:59,113 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:49:59,114 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:49:59,114 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:49:59,114 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:49:59,115 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:49:59,115 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong

2025-05-13 13:49:59,116 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong_rateints.fits ...

2025-05-13 13:49:59,286 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:59,502 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562477438 -42.102369358 209.569561399 -42.104275510 209.572070667 -42.099093272 209.564988642 -42.097172396

2025-05-13 13:49:59,503 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562477438 -42.102369358 209.569561399 -42.104275510 209.572070667 -42.099093272 209.564988642 -42.097172396

2025-05-13 13:49:59,504 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:49:59,534 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:49:59,662 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:59,754 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:49:59,754 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:49:59,755 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:49:59,756 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:49:59,779 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:49:59,796 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:49:59,919 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_image2pipeline.fits>,).

2025-05-13 13:49:59,941 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:49:59,942 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:49:59,966 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:49:59,966 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:49:59,967 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:49:59,967 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:49:59,968 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:49:59,996 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:49:59,997 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:49:59,998 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:00,005 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:00,006 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00003_nrcalong

2025-05-13 13:50:00,007 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:00,007 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:00,107 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_calints.fits

2025-05-13 13:50:00,107 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:00,108 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:00,153 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:00,161 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:00,172 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:00,173 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:00,174 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:00,176 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:00,176 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:00,178 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:00,307 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong_rateints.fits',).

2025-05-13 13:50:00,315 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:00,356 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00004_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:00,360 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:00,360 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:00,361 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:00,361 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:00,362 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:00,362 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:00,362 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:00,363 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:00,364 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:00,365 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:00,365 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:00,366 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:00,366 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:00,367 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:00,367 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:00,368 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:00,368 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:00,369 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:00,369 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:00,370 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:00,370 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:00,371 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:00,371 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong

2025-05-13 13:50:00,371 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong_rateints.fits ...

2025-05-13 13:50:00,540 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:00,754 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562483381 -42.102369506 209.569567342 -42.104275657 209.572076610 -42.099093418 209.564994584 -42.097172543

2025-05-13 13:50:00,755 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562483381 -42.102369506 209.569567342 -42.104275657 209.572076610 -42.099093418 209.564994584 -42.097172543

2025-05-13 13:50:00,755 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:00,785 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:00,915 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:01,008 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:01,008 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:01,009 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:01,009 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:01,033 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:01,050 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:01,187 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:01,210 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:01,210 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:01,234 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:01,235 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:01,236 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:01,236 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:01,237 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:01,265 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:01,266 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:01,267 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:01,275 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:01,276 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00004_nrcalong

2025-05-13 13:50:01,277 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:01,277 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:01,377 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_calints.fits

2025-05-13 13:50:01,378 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:01,378 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:01,424 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:01,432 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:01,444 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:01,445 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:01,446 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:01,446 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:01,447 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:01,448 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:01,584 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong_rateints.fits',).

2025-05-13 13:50:01,591 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:01,634 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00005_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:01,638 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:01,638 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:01,639 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:01,639 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:01,640 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:01,640 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:01,640 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:01,641 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:01,642 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:01,642 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:01,642 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:01,643 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:01,643 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:01,644 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:01,644 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:01,644 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:01,645 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:01,646 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:01,646 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:01,646 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:01,647 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:01,647 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:01,648 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong

2025-05-13 13:50:01,648 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong_rateints.fits ...

2025-05-13 13:50:01,820 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:02,037 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562488034 -42.102372206 209.569571996 -42.104278356 209.572081262 -42.099096117 209.564999236 -42.097175242

2025-05-13 13:50:02,038 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562488034 -42.102372206 209.569571996 -42.104278356 209.572081262 -42.099096117 209.564999236 -42.097175242

2025-05-13 13:50:02,039 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:02,069 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:02,206 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:02,292 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:02,293 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:02,293 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:02,294 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:02,320 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:02,337 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:02,481 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:02,503 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:02,503 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:02,527 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:02,528 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:02,528 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:02,529 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:02,529 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:02,558 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:02,558 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:02,560 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:02,567 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:02,568 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00005_nrcalong

2025-05-13 13:50:02,569 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:02,570 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:02,668 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_calints.fits

2025-05-13 13:50:02,669 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:02,669 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:02,714 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:02,722 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:02,734 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:02,735 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:02,736 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:02,737 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:02,738 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:02,740 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:02,869 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong_rateints.fits',).

2025-05-13 13:50:02,876 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:02,919 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00006_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:02,924 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:02,924 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:02,925 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:02,925 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:02,925 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:02,926 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:02,927 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:02,927 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:02,928 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:02,928 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:02,929 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:02,929 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:02,929 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:02,930 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:02,931 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:02,931 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:02,931 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:02,932 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:02,933 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:02,933 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:02,933 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:02,934 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:02,935 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong

2025-05-13 13:50:02,935 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong_rateints.fits ...

2025-05-13 13:50:03,109 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:03,325 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562487871 -42.102376553 209.569571834 -42.104282702 209.572081100 -42.099100462 209.564999073 -42.097179589

2025-05-13 13:50:03,326 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562487871 -42.102376553 209.569571834 -42.104282702 209.572081100 -42.099100462 209.564999073 -42.097179589

2025-05-13 13:50:03,327 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:03,357 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:03,489 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:03,578 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:03,579 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:03,579 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:03,580 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:03,603 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:03,620 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:03,753 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:03,776 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:03,776 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:03,800 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:03,801 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:03,801 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:03,802 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:03,802 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:03,831 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:03,831 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:03,833 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:03,840 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:03,841 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00006_nrcalong

2025-05-13 13:50:03,842 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:03,842 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:03,941 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_calints.fits

2025-05-13 13:50:03,942 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:03,942 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:03,989 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:03,997 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:04,009 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:04,010 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:04,011 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:04,012 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:04,012 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:04,014 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:04,158 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong_rateints.fits',).

2025-05-13 13:50:04,165 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:04,208 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00007_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:04,212 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:04,213 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:04,213 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:04,214 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:04,214 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:04,215 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:04,216 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:04,216 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:04,217 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:04,217 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:04,218 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:04,218 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:04,219 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:04,219 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:04,219 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:04,220 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:04,220 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:04,221 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:04,222 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:04,222 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:04,222 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:04,223 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:04,224 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong

2025-05-13 13:50:04,224 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong_rateints.fits ...

2025-05-13 13:50:04,407 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:04,624 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562484244 -42.102379973 209.569568209 -42.104286120 209.572077472 -42.099103880 209.564995443 -42.097183008

2025-05-13 13:50:04,624 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562484244 -42.102379973 209.569568209 -42.104286120 209.572077472 -42.099103880 209.564995443 -42.097183008

2025-05-13 13:50:04,625 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:04,655 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:04,794 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:04,881 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:04,881 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:04,882 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:04,882 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:04,906 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:04,923 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:05,067 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:05,090 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:05,090 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:05,115 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:05,115 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:05,116 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:05,116 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:05,117 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:05,145 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:05,145 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:05,147 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:05,154 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:05,155 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00007_nrcalong

2025-05-13 13:50:05,156 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:05,156 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:05,254 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_calints.fits

2025-05-13 13:50:05,255 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:05,255 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:05,301 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:05,309 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:05,320 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:05,321 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:05,322 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:05,323 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:05,324 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:05,325 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:05,463 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong_rateints.fits',).

2025-05-13 13:50:05,471 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:05,512 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00008_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:05,516 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:05,517 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:05,517 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:05,518 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:05,518 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:05,519 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:05,520 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:05,520 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:05,521 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:05,521 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:05,521 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:05,522 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:05,522 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:05,522 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:05,523 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:05,523 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:05,524 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:05,525 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:05,526 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:05,526 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:05,526 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:05,527 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:05,528 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong

2025-05-13 13:50:05,528 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong_rateints.fits ...

2025-05-13 13:50:05,701 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:05,917 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562478366 -42.102379867 209.569562329 -42.104286017 209.572071595 -42.099103778 209.564989569 -42.097182904

2025-05-13 13:50:05,918 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562478366 -42.102379867 209.569562329 -42.104286017 209.572071595 -42.099103778 209.564989569 -42.097182904

2025-05-13 13:50:05,919 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:05,949 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:06,085 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:06,179 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:06,180 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:06,180 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:06,181 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:06,205 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:06,222 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:06,366 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:06,388 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:06,389 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:06,414 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:06,414 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:06,415 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:06,415 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:06,416 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:06,444 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:06,444 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:06,446 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:06,454 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:06,455 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00008_nrcalong

2025-05-13 13:50:06,455 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:06,456 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:06,554 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_calints.fits

2025-05-13 13:50:06,554 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:06,555 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:06,600 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:06,608 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:06,619 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:06,620 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:06,621 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:06,622 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:06,623 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:06,624 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:06,767 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong_rateints.fits',).

2025-05-13 13:50:06,775 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:06,817 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00009_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:06,821 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:06,822 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:06,822 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:06,823 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:06,823 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:06,824 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:06,824 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:06,824 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:06,826 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:06,826 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:06,826 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:06,827 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:06,828 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:06,828 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:06,828 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:06,829 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:06,829 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:06,830 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:06,830 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:06,830 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:06,831 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:06,831 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:06,832 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong

2025-05-13 13:50:06,832 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong_rateints.fits ...

2025-05-13 13:50:07,012 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:07,229 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  209.562473627 -42.102377172 209.569557590 -42.104283323 209.572066857 -42.099101084 209.564984831 -42.097180209

2025-05-13 13:50:07,230 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  209.562473627 -42.102377172 209.569557590 -42.104283323 209.572066857 -42.099101084 209.564984831 -42.097180209

2025-05-13 13:50:07,230 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:07,261 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:07,403 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:07,497 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:07,498 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:07,498 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:07,498 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:07,522 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:07,539 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:07,689 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:07,711 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:07,711 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:07,736 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:07,737 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:07,737 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:07,738 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:07,738 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:07,767 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:07,767 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:07,769 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:07,777 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:07,777 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386001001_0310e_00009_nrcalong

2025-05-13 13:50:07,778 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:07,778 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:07,878 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_calints.fits

2025-05-13 13:50:07,878 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:07,879 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:07,924 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:07,933 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:07,944 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:07,945 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:07,946 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:07,947 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:07,948 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:07,949 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:08,095 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong_rateints.fits',).

2025-05-13 13:50:08,103 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:08,145 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386002001_0310a_00001_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:08,149 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:08,150 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:08,150 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:08,150 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:08,151 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:08,151 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:08,153 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:08,153 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:08,154 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:08,154 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:08,155 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:08,155 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:08,155 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:08,156 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:08,156 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:08,157 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:08,157 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:08,159 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:08,159 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:08,159 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:08,160 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:08,160 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:08,161 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong

2025-05-13 13:50:08,162 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong_rateints.fits ...

2025-05-13 13:50:08,348 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:08,569 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  201.143991516 -51.506050055 201.152421278 -51.507981033 201.155451494 -51.502807553 201.147024382 -51.500861919

2025-05-13 13:50:08,570 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  201.143991516 -51.506050055 201.152421278 -51.507981033 201.155451494 -51.502807553 201.147024382 -51.500861919

2025-05-13 13:50:08,571 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:08,601 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:08,758 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:08,851 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:08,852 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:08,852 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:08,853 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:08,877 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:08,893 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:09,034 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:09,058 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:09,058 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:09,083 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:09,084 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:09,084 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:09,084 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:09,085 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:09,114 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:09,114 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:09,116 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:09,123 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:09,124 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386002001_0310a_00001_nrcalong

2025-05-13 13:50:09,125 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:09,125 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:09,223 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_calints.fits

2025-05-13 13:50:09,224 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:09,224 - stpipe - INFO - Results used jwst version: 1.18.0

2025-05-13 13:50:09,269 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:09,277 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-image2pipeline_0003.asdf

2025-05-13 13:50:09,288 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.

2025-05-13 13:50:09,289 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.

2025-05-13 13:50:09,291 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.

2025-05-13 13:50:09,291 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.

2025-05-13 13:50:09,292 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.

2025-05-13 13:50:09,293 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:09,454 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong_rateints.fits',).

2025-05-13 13:50:09,462 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage2
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: None
  search_output_file: True
  input_dir: ''
  save_bsub: False
  steps:
    bkg_subtract:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: True
      suffix: None
      search_output_file: True
      input_dir: ''
      save_combined_background: False
      sigma: 3.0
      maxiters: None
      wfss_mmag_extract: None
      wfss_maxiter: 5
      wfss_rms_stop: 0.0
      wfss_outlier_percent: 1.0
    assign_wcs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      sip_approx: True
      sip_max_pix_error: 0.01
      sip_degree: None
      sip_max_inv_pix_error: 0.01
      sip_inv_degree: None
      sip_npoints: 12
      slit_y_low: -0.55
      slit_y_high: 0.55
    flat_field:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      save_interpolated_flat: False
      user_supplied_flat: None
      inverse: False
    photom:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      inverse: False
      source_type: None
      mrs_time_correction: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:09,505 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01386003001_0310a_00001_nrcalong_rateints.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']

2025-05-13 13:50:09,509 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits'.

2025-05-13 13:50:09,510 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.

2025-05-13 13:50:09,510 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.

2025-05-13 13:50:09,510 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.

2025-05-13 13:50:09,511 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.

2025-05-13 13:50:09,511 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_distortion_0173.asdf'.

2025-05-13 13:50:09,512 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.

2025-05-13 13:50:09,513 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_filteroffset_0007.asdf'.

2025-05-13 13:50:09,513 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits'.

2025-05-13 13:50:09,513 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.

2025-05-13 13:50:09,514 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.

2025-05-13 13:50:09,514 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.

2025-05-13 13:50:09,515 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.

2025-05-13 13:50:09,515 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.

2025-05-13 13:50:09,515 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.

2025-05-13 13:50:09,516 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.

2025-05-13 13:50:09,516 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits'.

2025-05-13 13:50:09,517 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.

2025-05-13 13:50:09,517 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.

2025-05-13 13:50:09,518 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.

2025-05-13 13:50:09,518 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.

2025-05-13 13:50:09,519 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...

2025-05-13 13:50:09,520 - stpipe.Image2Pipeline - INFO - Processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong

2025-05-13 13:50:09,520 - stpipe.Image2Pipeline - INFO - Working on input /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong_rateints.fits ...

2025-05-13 13:50:09,721 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:09,938 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS  201.143667379 -51.505369829 201.151423924 -51.508189394 201.155862208 -51.503425915 201.148112174 -51.500592198

2025-05-13 13:50:09,939 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS  201.143667379 -51.505369829 201.151423924 -51.508189394 201.155862208 -51.503425915 201.148112174 -51.500592198

2025-05-13 13:50:09,940 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs

2025-05-13 13:50:09,970 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done

2025-05-13 13:50:10,126 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:10,218 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_flat_0465.fits

2025-05-13 13:50:10,219 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT

2025-05-13 13:50:10,219 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT

2025-05-13 13:50:10,220 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT

2025-05-13 13:50:10,245 - stpipe.Image2Pipeline.flat_field - INFO - Extracting matching subarray from flat

2025-05-13 13:50:10,262 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done

2025-05-13 13:50:10,420 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<CubeModel(2, 320, 320) from ./nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_image2pipeline.fits>,).

2025-05-13 13:50:10,442 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_photom_0157.fits

2025-05-13 13:50:10,443 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: /home/runner/crds/references/jwst/nircam/jwst_nircam_area_0042.fits

2025-05-13 13:50:10,467 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRCAM

2025-05-13 13:50:10,468 - stpipe.Image2Pipeline.photom - INFO -  detector: NRCALONG

2025-05-13 13:50:10,469 - stpipe.Image2Pipeline.photom - INFO -  exp_type: NRC_CORON

2025-05-13 13:50:10,469 - stpipe.Image2Pipeline.photom - INFO -  filter: F444W

2025-05-13 13:50:10,470 - stpipe.Image2Pipeline.photom - INFO -  pupil: MASKRND

2025-05-13 13:50:10,499 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.

2025-05-13 13:50:10,499 - stpipe.Image2Pipeline.photom - INFO - Values for PIXAR_SR and PIXAR_A2 obtained from AREA reference file.

2025-05-13 13:50:10,501 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 2.516

2025-05-13 13:50:10,508 - stpipe.Image2Pipeline.photom - INFO - Step photom done

2025-05-13 13:50:10,509 - stpipe.Image2Pipeline - INFO - Finished processing product /home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage1/jw01386003001_0310a_00001_nrcalong

2025-05-13 13:50:10,510 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2

2025-05-13 13:50:10,510 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1364.pmap

2025-05-13 13:50:10,611 - stpipe.Image2Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_calints.fits

2025-05-13 13:50:10,611 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done

2025-05-13 13:50:10,612 - stpipe - INFO - Results used jwst version: 1.18.0

# Print out the time benchmark
time1 = time.perf_counter()
print(f"Runtime so far: {time1 - time0:0.0f} seconds")
print(f"Runtime for Image2: {time1 - time_image2:0.0f} seconds")

Runtime so far: 110 seconds
Runtime for Image2: 21 seconds

Verify which pipeline steps were run#

if doimage2:
    # Identify *_cal.fits file products
    cal_files = sorted(glob.glob(os.path.join(image2_dir, '*_calints.fits')))

    # Select first file to gather information
    cal_f = datamodels.open(cal_files[0])

    # Check which steps were run:
    cal_f.meta.cal_step.instance

{'assign_wcs': 'COMPLETE',
 'charge_migration': 'SKIPPED',
 'clean_flicker_noise': 'SKIPPED',
 'dark_sub': 'COMPLETE',
 'dq_init': 'COMPLETE',
 'flat_field': 'COMPLETE',
 'gain_scale': 'SKIPPED',
 'group_scale': 'SKIPPED',
 'ipc': 'SKIPPED',
 'jump': 'COMPLETE',
 'linearity': 'COMPLETE',
 'persistence': 'SKIPPED',
 'photom': 'COMPLETE',
 'ramp_fit': 'COMPLETE',
 'refpix': 'COMPLETE',
 'saturation': 'COMPLETE',
 'superbias': 'COMPLETE'}

Check which reference files were used to calibrate the first file. Some of these will be detector-dependent.

if doimage2:
    cal_f.meta.ref_file.instance

{'area': {'name': 'crds://jwst_nircam_area_0042.fits'},
 'camera': {'name': 'N/A'},
 'collimator': {'name': 'N/A'},
 'crds': {'context_used': 'jwst_1364.pmap', 'sw_version': '12.1.5'},
 'dark': {'name': 'crds://jwst_nircam_dark_0415.fits'},
 'dflat': {'name': 'N/A'},
 'disperser': {'name': 'N/A'},
 'distortion': {'name': 'crds://jwst_nircam_distortion_0173.asdf'},
 'fflat': {'name': 'N/A'},
 'filteroffset': {'name': 'crds://jwst_nircam_filteroffset_0007.asdf'},
 'flat': {'name': 'crds://jwst_nircam_flat_0465.fits'},
 'fore': {'name': 'N/A'},
 'fpa': {'name': 'N/A'},
 'gain': {'name': 'crds://jwst_nircam_gain_0097.fits'},
 'ifufore': {'name': 'N/A'},
 'ifupost': {'name': 'N/A'},
 'ifuslicer': {'name': 'N/A'},
 'linearity': {'name': 'crds://jwst_nircam_linearity_0052.fits'},
 'mask': {'name': 'crds://jwst_nircam_mask_0076.fits'},
 'msa': {'name': 'N/A'},
 'ote': {'name': 'N/A'},
 'photom': {'name': 'crds://jwst_nircam_photom_0157.fits'},
 'readnoise': {'name': 'crds://jwst_nircam_readnoise_0284.fits'},
 'regions': {'name': 'N/A'},
 'saturation': {'name': 'crds://jwst_nircam_saturation_0097.fits'},
 'sflat': {'name': 'N/A'},
 'specwcs': {'name': 'N/A'},
 'superbias': {'name': 'crds://jwst_nircam_superbias_0229.fits'},
 'wavelengthrange': {'name': 'N/A'}}

7. Coron3 Pipeline#

In the Coron3 stage of the calibration pipeline, the *_calints.fits files from the reference PSF images are aligned and subtracted from the science PSF images, and the PSF-subtracted science images are combined into a single undistorted product.

First, we need to create Associations, to inform the pipeline which files are the reference and science PSFs.

By default, the Coron3 stage of the pipeline performs the following steps on NIRCam data:

outlier_detection - flags outlier pixels in all input images.
stack_refs - stacks all of the reference PSF images together into a single product.
align_refs - aligns all of the reference PSF images to the science target images.
klip - fits and subtracts a PSF from each science target image.
resample - combines all of the PSF-subtracted science images into a single undistorted product.

time_coron3 = time.perf_counter()

# Set up a dictionary to define how the Coron3 pipeline should be configured

# Boilerplate dictionary setup
coron3dict = {}
coron3dict['outlier_detection'], coron3dict['stack_refs'], coron3dict['align_refs'] = {}, {}, {}
coron3dict['klip'], coron3dict['resample'] = {}, {}

# Overrides for whether or not certain steps should be skipped (example)
#coron3dict['outlier_detection']['skip'] = True

# Reduce the SNR required for a pixel to be flagged as an outlier
#coron3dict['outlier_detection']['snr'] = '4.5 3.5'

# Define which pixels types are bad based on the images' data quality arrays 
# (only DO_NOT_USE by default). New bad pixels can be flagged in the images' data 
# quality arrays to avoid issues with the psf alignment or subtraction steps.
#coron3dict['align_refs']['bad_bits'] = 'DO_NOT_USE, OTHER_BAD_PIXEL'

Find and sort all of the input files, ensuring use of absolute paths.

# Science Files need the calints.fits files
sstring = os.path.join(image2_dir, '*_calints.fits')

# Identify calints files
cal_files = sorted(glob.glob(os.path.join(image2_dir, '*_calints.fits')))

# Expand the relative paths into absolute paths
cal_files = [os.path.abspath(fname) for fname in cal_files]

print(f'Found {len(cal_files)} science files to process')

Found 11 science files to process

Create Association File#

An association file lists the files to calibrate together in Stage3 of the pipeline. For the Coron3 pipeline, the reference and science psfs must be specified in the association file. Note that association files are available for download from MAST, with filenames of *_asn.json. Here we show how to create an association file to point to the data products created in the steps above. This is useful in cases where you want to work with a set of data that is different than that in the association files from MAST.

Using the associations.asn_from_list command and Asn_lv3NRCCoron helps identify the PSF reference from the science PSF using the header information in the files.

# List of data to use
print('\nList of calints files to use:')
cal_files

List of calints files to use:

['/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_calints.fits',
 '/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_calints.fits']

# Create Level 3 Association for the Coron3 pipeline

# Look through the input files for exptype SCIENCE to set default output names
product_name = 'L3product'
for file in cal_files:
    hdr = fits.getheader(file)
    if (~hdr['IS_PSF']):
        product_name = hdr['TARGNAME'].replace(" ", "") + "-" + hdr['FILTER']

asn_filename = os.path.join(coron3_dir, product_name + '.json')
asn = asn_from_list.asn_from_list(cal_files, rule=Asn_Lv3NRCCoron, 
                                  product_name=product_name)

# observations 2 and 3 are the science targets, observation 1 is the reference PSF
for member in asn['products'][0]['members']:
    if fits.getheader(member['expname'])['IS_PSF']:
        member['exptype'] = 'psf'
    else:
        member['exptype'] = 'science'

# Level 3 coronagraphic associations require at least one PSF
# Validates the association for this case.
asn.validity['has_psf']['validated'] = True  # set to True since psfs were added to the asn above
asn['asn_type'] = 'coron3'
with open(asn_filename, 'w') as outfile:
    outfile.write(asn.dump()[1])
asn

2025-05-13 13:50:10,784 - stpipe - WARNING - /tmp/ipykernel_2200/2011717752.py:7: DeprecationWarning: Bitwise inversion '~' on bool is deprecated and will be removed in Python 3.16. This returns the bitwise inversion of the underlying int object and is usually not what you expect from negating a bool. Use the 'not' operator for boolean negation or ~int(x) if you really want the bitwise inversion of the underlying int.
  if (~hdr['IS_PSF']):

2025-05-13 13:50:10,812 - stpipe - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/jwst/associations/association.py:215: UserWarning: Input association file contains path information; note that this can complicate usage and/or sharing of such files.
  warnings.warn(err_str, UserWarning)

{
    "asn_type": "coron3",
    "asn_rule": "Asn_Lv3NRCCoron",
    "version_id": null,
    "code_version": "1.18.0",
    "degraded_status": "No known degraded exposures in association.",
    "program": "noprogram",
    "constraints": "No constraints",
    "asn_id": "a3001",
    "target": "none",
    "asn_pool": "none",
    "products": [
        {
            "name": "HD116434-F444W",
            "members": [
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00001_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00002_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00003_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00004_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00005_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00006_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00007_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00008_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386001001_0310e_00009_nrcalong_calints.fits",
                    "exptype": "psf"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386002001_0310a_00001_nrcalong_calints.fits",
                    "exptype": "science"
                },
                {
                    "expname": "/home/runner/work/jwst-pipeline-notebooks/jwst-pipeline-notebooks/notebooks/NIRCAM/Coronagraphy/nrc_coron_demo_data/stage2/jw01386003001_0310a_00001_nrcalong_calints.fits",
                    "exptype": "science"
                }
            ]
        }
    ]
}

Run Coron3 stage of the pipeline#

The Coron3 stage of the pipeline will produce the following outputs:

a _crf.fits file produced by the outlier_detection step for each input image, where the DQ array marks the pixels flagged as outliers.
a _psfstack image containing a stack of all of the reference PSF images.
a _psfalign image for each science PSF, where the reference PSFs have been aligned to the science PSF.
a _psfsub image for each science PSF, where the aligned reference PSFs have been subtracted from the science PSF.
a final combined, undistorted PSF-subtracted image with suffix _i2d.fits.

# Run Coron3 stage of pipeline, specifying:
# output directory to save output files
# save_results flag set to True so the files are saved

if docoron3:
    result = Coron3Pipeline.call(asn_filename,
                                 output_dir=coron3_dir,
                                 steps=coron3dict,
                                 save_results=True)
else:
    print("Skipping Coron3 processing.")

2025-05-13 13:50:10,966 - stpipe - INFO - PARS-RESAMPLESTEP parameters found: /home/runner/crds/references/jwst/nircam/jwst_nircam_pars-resamplestep_0001.asdf

2025-05-13 13:50:10,979 - stpipe.Coron3Pipeline - INFO - Coron3Pipeline instance created.

2025-05-13 13:50:10,980 - stpipe.Coron3Pipeline.stack_refs - INFO - StackRefsStep instance created.

2025-05-13 13:50:10,982 - stpipe.Coron3Pipeline.align_refs - INFO - AlignRefsStep instance created.

2025-05-13 13:50:10,982 - stpipe.Coron3Pipeline.klip - INFO - KlipStep instance created.

2025-05-13 13:50:10,984 - stpipe.Coron3Pipeline.outlier_detection - INFO - OutlierDetectionStep instance created.

2025-05-13 13:50:10,985 - stpipe.Coron3Pipeline.resample - INFO - ResampleStep instance created.

2025-05-13 13:50:11,150 - stpipe.Coron3Pipeline - INFO - Step Coron3Pipeline running with args ('./nrc_coron_demo_data/stage3/HD116434-F444W.json',).

2025-05-13 13:50:11,157 - stpipe.Coron3Pipeline - INFO - Step Coron3Pipeline parameters are:
  pre_hooks: []
  post_hooks: []
  output_file: None
  output_dir: ./nrc_coron_demo_data/stage3
  output_ext: .fits
  output_use_model: False
  output_use_index: True
  save_results: True
  skip: False
  suffix: i2d
  search_output_file: True
  input_dir: ''
  steps:
    stack_refs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
    align_refs:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      median_box_length: 3
      bad_bits: DO_NOT_USE
    klip:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      truncate: 50
    outlier_detection:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: False
      input_dir: ''
      weight_type: ivm
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      maskpt: 0.7
      snr: 5.0 4.0
      scale: 1.2 0.7
      backg: 0.0
      kernel_size: 7 7
      threshold_percent: 99.8
      rolling_window_width: 25
      ifu_second_check: False
      save_intermediate_results: False
      resample_data: True
      good_bits: ~DO_NOT_USE
      in_memory: True
    resample:
      pre_hooks: []
      post_hooks: []
      output_file: None
      output_dir: None
      output_ext: .fits
      output_use_model: False
      output_use_index: True
      save_results: False
      skip: False
      suffix: None
      search_output_file: True
      input_dir: ''
      pixfrac: 1.0
      kernel: square
      fillval: NAN
      weight_type: exptime
      output_shape: None
      crpix: None
      crval: None
      rotation: None
      pixel_scale_ratio: 1.0
      pixel_scale: None
      output_wcs: ''
      single: False
      blendheaders: True
      in_memory: True

2025-05-13 13:50:11,158 - stpipe.Coron3Pipeline - INFO - Starting calwebb_coron3 ...

2025-05-13 13:50:11,167 - stpipe.Coron3Pipeline - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/jwst/associations/association.py:215: UserWarning: Input association file contains path information; note that this can complicate usage and/or sharing of such files.
  warnings.warn(err_str, UserWarning)

2025-05-13 13:50:12,305 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00001_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,308 - CRDS - INFO -  Fetching  /home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits  420.5 K bytes  (1 / 1 files) (0 / 420.5 K bytes)

2025-05-13 13:50:12,383 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,476 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00002_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,479 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,572 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00003_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,575 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,673 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00004_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,676 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,767 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00005_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,770 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,863 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00006_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,866 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:12,958 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00007_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:12,961 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:13,053 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00008_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:13,056 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:13,149 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386001001_0310e_00009_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:13,152 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:13,422 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386002001_0310a_00001_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:13,426 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:13,519 - stpipe.Coron3Pipeline - INFO - Prefetching reference files for dataset: 'jw01386003001_0310a_00001_nrcalong_calints.fits' reftypes = ['psfmask']

2025-05-13 13:50:13,522 - stpipe.Coron3Pipeline - INFO - Prefetch for PSFMASK reference file is '/home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits'.

2025-05-13 13:50:14,576 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00001_nrcalong_calints.fits>,).

2025-05-13 13:50:14,577 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:14,577 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:14,584 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:14,683 - stpipe.Coron3Pipeline.outlier_detection - INFO - 2 pixels marked as outliers

2025-05-13 13:50:14,790 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00001_nrcalong_a3001_crfints.fits

2025-05-13 13:50:14,791 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:14,970 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00002_nrcalong_calints.fits>,).

2025-05-13 13:50:14,970 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:14,971 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:14,978 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:15,073 - stpipe.Coron3Pipeline.outlier_detection - INFO - 0 pixels marked as outliers

2025-05-13 13:50:15,180 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00002_nrcalong_a3001_crfints.fits

2025-05-13 13:50:15,181 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:15,354 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00003_nrcalong_calints.fits>,).

2025-05-13 13:50:15,354 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:15,355 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:15,362 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:15,460 - stpipe.Coron3Pipeline.outlier_detection - INFO - 0 pixels marked as outliers

2025-05-13 13:50:15,566 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00003_nrcalong_a3001_crfints.fits

2025-05-13 13:50:15,566 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:15,744 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00004_nrcalong_calints.fits>,).

2025-05-13 13:50:15,745 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:15,745 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:15,752 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:15,847 - stpipe.Coron3Pipeline.outlier_detection - INFO - 2 pixels marked as outliers

2025-05-13 13:50:15,954 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00004_nrcalong_a3001_crfints.fits

2025-05-13 13:50:15,954 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:16,119 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00005_nrcalong_calints.fits>,).

2025-05-13 13:50:16,120 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:16,121 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:16,128 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:16,225 - stpipe.Coron3Pipeline.outlier_detection - INFO - 0 pixels marked as outliers

2025-05-13 13:50:16,330 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00005_nrcalong_a3001_crfints.fits

2025-05-13 13:50:16,331 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:16,510 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00006_nrcalong_calints.fits>,).

2025-05-13 13:50:16,511 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:16,512 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:16,518 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:16,614 - stpipe.Coron3Pipeline.outlier_detection - INFO - 2 pixels marked as outliers

2025-05-13 13:50:16,720 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00006_nrcalong_a3001_crfints.fits

2025-05-13 13:50:16,721 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:16,899 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00007_nrcalong_calints.fits>,).

2025-05-13 13:50:16,900 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:16,901 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:16,907 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:17,003 - stpipe.Coron3Pipeline.outlier_detection - INFO - 4 pixels marked as outliers

2025-05-13 13:50:17,109 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00007_nrcalong_a3001_crfints.fits

2025-05-13 13:50:17,110 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:17,273 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00008_nrcalong_calints.fits>,).

2025-05-13 13:50:17,273 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:17,274 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:17,281 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:17,377 - stpipe.Coron3Pipeline.outlier_detection - INFO - 2 pixels marked as outliers

2025-05-13 13:50:17,483 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00008_nrcalong_a3001_crfints.fits

2025-05-13 13:50:17,484 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:17,655 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386001001_0310e_00009_nrcalong_calints.fits>,).

2025-05-13 13:50:17,656 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:17,656 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:17,663 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:17,760 - stpipe.Coron3Pipeline.outlier_detection - INFO - 5 pixels marked as outliers

2025-05-13 13:50:17,870 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386001001_0310e_00009_nrcalong_a3001_crfints.fits

2025-05-13 13:50:17,870 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:18,050 - stpipe.Coron3Pipeline.stack_refs - INFO - Step stack_refs running with args (<jwst.datamodels.container.ModelContainer object at 0x7f7e98339450>,).

2025-05-13 13:50:18,108 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 1 to output stack

2025-05-13 13:50:18,110 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 2 to output stack

2025-05-13 13:50:18,112 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 3 to output stack

2025-05-13 13:50:18,115 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 4 to output stack

2025-05-13 13:50:18,118 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 5 to output stack

2025-05-13 13:50:18,120 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 6 to output stack

2025-05-13 13:50:18,122 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 7 to output stack

2025-05-13 13:50:18,125 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 8 to output stack

2025-05-13 13:50:18,128 - stpipe.Coron3Pipeline.stack_refs - INFO -  Adding psf member 9 to output stack

2025-05-13 13:50:18,154 - stpipe.Coron3Pipeline.stack_refs - INFO - Step stack_refs done

2025-05-13 13:50:18,222 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/HD116434-F444W_psfstack.fits

2025-05-13 13:50:18,507 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386002001_0310a_00001_nrcalong_calints.fits>,).

2025-05-13 13:50:18,508 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:18,508 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:18,515 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:18,610 - stpipe.Coron3Pipeline.outlier_detection - INFO - 52 pixels marked as outliers

2025-05-13 13:50:18,715 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386002001_0310a_00001_nrcalong_a3001_crfints.fits

2025-05-13 13:50:18,716 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:18,905 - stpipe.Coron3Pipeline.align_refs - INFO - Step align_refs running with args (<CubeModel(2, 320, 320) from jw01386002001_0310a_00001_nrcalong_a3001_crfints.fits>, <CubeModel(18, 320, 320) from HD116434-F444W_psfstack.fits>).

2025-05-13 13:50:18,924 - stpipe.Coron3Pipeline.align_refs - INFO - Using PSFMASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits

2025-05-13 13:50:18,946 - stpipe.Coron3Pipeline.align_refs - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/numpy/_core/fromnumeric.py:3860: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,

2025-05-13 13:50:18,947 - stpipe.Coron3Pipeline.align_refs - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/numpy/_core/_methods.py:145: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)

2025-05-13 13:50:25,199 - stpipe.Coron3Pipeline.align_refs - INFO - Step align_refs done

2025-05-13 13:50:25,273 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386002001_0310a_00001_nrcalong_a3001_psfalign.fits

2025-05-13 13:50:25,457 - stpipe.Coron3Pipeline.klip - INFO - Step klip running with args (<CubeModel(2, 320, 320) from jw01386002001_0310a_00001_nrcalong_a3001_crfints.fits>, <CubeModel(18, 320, 320) from jw01386002001_0310a_00001_nrcalong_a3001_psfalign.fits>).

2025-05-13 13:50:25,465 - stpipe.Coron3Pipeline.klip - INFO - KL transform truncation = 50

2025-05-13 13:50:25,590 - stpipe.Coron3Pipeline.klip - INFO - Step klip done

2025-05-13 13:50:25,716 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386002001_0310a_00001_nrcalong_a3001_psfsub.fits

2025-05-13 13:50:26,087 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<CubeModel(2, 320, 320) from jw01386003001_0310a_00001_nrcalong_calints.fits>,).

2025-05-13 13:50:26,088 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection mode: coron

2025-05-13 13:50:26,089 - stpipe.Coron3Pipeline.outlier_detection - INFO - Outlier Detection asn_id: a3001

2025-05-13 13:50:26,095 - stpipe.Coron3Pipeline.outlier_detection - INFO - Computing median

2025-05-13 13:50:26,191 - stpipe.Coron3Pipeline.outlier_detection - INFO - 7 pixels marked as outliers

2025-05-13 13:50:26,294 - stpipe.Coron3Pipeline.outlier_detection - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386003001_0310a_00001_nrcalong_a3001_crfints.fits

2025-05-13 13:50:26,295 - stpipe.Coron3Pipeline.outlier_detection - INFO - Step outlier_detection done

2025-05-13 13:50:26,480 - stpipe.Coron3Pipeline.align_refs - INFO - Step align_refs running with args (<CubeModel(2, 320, 320) from jw01386003001_0310a_00001_nrcalong_a3001_crfints.fits>, <CubeModel(18, 320, 320) from HD116434-F444W_psfstack.fits>).

2025-05-13 13:50:26,496 - stpipe.Coron3Pipeline.align_refs - INFO - Using PSFMASK reference file /home/runner/crds/references/jwst/nircam/jwst_nircam_psfmask_0211.fits

2025-05-13 13:50:26,518 - stpipe.Coron3Pipeline.align_refs - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/numpy/_core/fromnumeric.py:3860: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,

2025-05-13 13:50:26,519 - stpipe.Coron3Pipeline.align_refs - WARNING - /usr/share/miniconda/lib/python3.13/site-packages/numpy/_core/_methods.py:145: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)

2025-05-13 13:50:32,812 - stpipe.Coron3Pipeline.align_refs - INFO - Step align_refs done

2025-05-13 13:50:32,886 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386003001_0310a_00001_nrcalong_a3001_psfalign.fits

2025-05-13 13:50:33,061 - stpipe.Coron3Pipeline.klip - INFO - Step klip running with args (<CubeModel(2, 320, 320) from jw01386003001_0310a_00001_nrcalong_a3001_crfints.fits>, <CubeModel(18, 320, 320) from jw01386003001_0310a_00001_nrcalong_a3001_psfalign.fits>).

2025-05-13 13:50:33,069 - stpipe.Coron3Pipeline.klip - INFO - KL transform truncation = 50

2025-05-13 13:50:33,181 - stpipe.Coron3Pipeline.klip - INFO - Step klip done

2025-05-13 13:50:33,308 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/jw01386003001_0310a_00001_nrcalong_a3001_psfsub.fits

2025-05-13 13:50:33,589 - stpipe.Coron3Pipeline.resample - INFO - Step resample running with args (<jwst.datamodels.library.ModelLibrary object at 0x7f7ea47a5fd0>,).

2025-05-13 13:50:33,619 - stpipe.Coron3Pipeline.resample - INFO - Pixel scale ratio (pscale_out/pscale_in): 1.0

2025-05-13 13:50:33,619 - stpipe.Coron3Pipeline.resample - INFO - Computed output pixel scale: 0.06247249918506676 arcsec.

2025-05-13 13:50:33,634 - stpipe.Coron3Pipeline.resample - INFO - Output pixel scale: 0.06247249918506676 arcsec.

2025-05-13 13:50:33,634 - stpipe.Coron3Pipeline.resample - INFO - Driz parameter kernel: square

2025-05-13 13:50:33,635 - stpipe.Coron3Pipeline.resample - INFO - Driz parameter pixfrac: 1.0

2025-05-13 13:50:33,635 - stpipe.Coron3Pipeline.resample - INFO - Driz parameter fillval: NAN

2025-05-13 13:50:33,636 - stpipe.Coron3Pipeline.resample - INFO - Driz parameter weight_type: exptime

2025-05-13 13:50:33,637 - stpipe.Coron3Pipeline.resample - INFO - Resampling science and variance data

2025-05-13 13:50:33,692 - stpipe.Coron3Pipeline.resample - INFO - Resampling science and variance data

2025-05-13 13:50:33,713 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:33,736 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:33,762 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:33,871 - stpipe.Coron3Pipeline.resample - INFO - Resampling science and variance data

2025-05-13 13:50:33,893 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:33,915 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:33,937 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,012 - stpipe.Coron3Pipeline.resample - INFO - Resampling science and variance data

2025-05-13 13:50:34,037 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,062 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,087 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,166 - stpipe.Coron3Pipeline.resample - INFO - Resampling science and variance data

2025-05-13 13:50:34,191 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,216 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,241 - stpipe.Coron3Pipeline.resample - INFO - Drizzling (320, 320) --> (371, 369)

2025-05-13 13:50:34,293 - stpipe.Coron3Pipeline.resample - INFO - Update S_REGION to POLYGON ICRS  201.143109110 -51.506283855 201.152810262 -51.508517828 201.156379099 -51.502512049 201.146679051 -51.500278371

2025-05-13 13:50:34,299 - stpipe.Coron3Pipeline.resample - INFO - Step resample done

2025-05-13 13:50:34,705 - stpipe.Coron3Pipeline - INFO - Saved model in ./nrc_coron_demo_data/stage3/HD116434-F444W_i2d.fits

2025-05-13 13:50:34,706 - stpipe.Coron3Pipeline - INFO - ...ending calwebb_coron3

2025-05-13 13:50:34,717 - stpipe.Coron3Pipeline - INFO - Step Coron3Pipeline done

2025-05-13 13:50:34,718 - stpipe - INFO - Results used jwst version: 1.18.0

# Print out the time benchmark
time1 = time.perf_counter()
print(f"Runtime so far: {time1 - time0:0.0f} seconds")
print(f"Runtime for Coron3: {time1 - time_coron3:0.0f} seconds")

Runtime so far: 135 seconds
Runtime for Coron3: 24 seconds

Verify which pipeline steps were run#

# Identify *_i2d file and open as datamodel
if docoron3:
    i2d_file = os.path.join(coron3_dir, f'{product_name}_i2d.fits')
    i2d_model = datamodels.open(i2d_file)
    step_check_model = i2d_model

    # Check which steps were run.
    step_check_model.meta.cal_step.instance

{'assign_wcs': 'COMPLETE',
 'charge_migration': 'SKIPPED',
 'clean_flicker_noise': 'SKIPPED',
 'dark_sub': 'SKIPPED',
 'dq_init': 'COMPLETE',
 'flat_field': 'COMPLETE',
 'gain_scale': 'SKIPPED',
 'group_scale': 'SKIPPED',
 'ipc': 'SKIPPED',
 'jump': 'COMPLETE',
 'klip': 'COMPLETE',
 'linearity': 'COMPLETE',
 'outlier_detection': 'COMPLETE',
 'persistence': 'SKIPPED',
 'photom': 'COMPLETE',
 'ramp_fit': 'COMPLETE',
 'refpix': 'COMPLETE',
 'resample': 'COMPLETE',
 'saturation': 'COMPLETE',
 'superbias': 'COMPLETE'}

Check which reference files were used to calibrate the dataset

if docoron3:
    step_check_model.meta.ref_file.instance

{'area': {'name': 'crds://jwst_nircam_area_0042.fits'},
 'camera': {'name': 'N/A'},
 'collimator': {'name': 'N/A'},
 'crds': {'context_used': 'jwst_1364.pmap', 'sw_version': '12.1.5'},
 'dark': {'name': 'crds://jwst_nircam_dark_0415.fits'},
 'dflat': {'name': 'N/A'},
 'disperser': {'name': 'N/A'},
 'distortion': {'name': 'crds://jwst_nircam_distortion_0173.asdf'},
 'fflat': {'name': 'N/A'},
 'filteroffset': {'name': 'crds://jwst_nircam_filteroffset_0007.asdf'},
 'flat': {'name': 'crds://jwst_nircam_flat_0465.fits'},
 'fore': {'name': 'N/A'},
 'fpa': {'name': 'N/A'},
 'gain': {'name': 'crds://jwst_nircam_gain_0097.fits'},
 'ifufore': {'name': 'N/A'},
 'ifupost': {'name': 'N/A'},
 'ifuslicer': {'name': 'N/A'},
 'linearity': {'name': 'crds://jwst_nircam_linearity_0052.fits'},
 'mask': {'name': 'crds://jwst_nircam_mask_0076.fits'},
 'msa': {'name': 'N/A'},
 'ote': {'name': 'N/A'},
 'photom': {'name': 'crds://jwst_nircam_photom_0157.fits'},
 'readnoise': {'name': 'crds://jwst_nircam_readnoise_0284.fits'},
 'regions': {'name': 'N/A'},
 'saturation': {'name': 'crds://jwst_nircam_saturation_0097.fits'},
 'sflat': {'name': 'N/A'},
 'specwcs': {'name': 'N/A'},
 'superbias': {'name': 'crds://jwst_nircam_superbias_0229.fits'},
 'wavelengthrange': {'name': 'N/A'}}

8. Visualize the final PSF subtracted images#

Below we show each individual psf-subtracted science roll and integration, as well as the final combined PSF-subtracted image from the Coron3 pipeline run:

# Inspect the psf-subtracted images generated in the coron3 pipeline run
if docoron3:
    files = sorted(glob.glob(os.path.join(coron3_dir, '*_psfsub.fits')))
    grid = plt.GridSpec(2, 4, hspace=0.3, wspace=0.3)
    fig = plt.figure(figsize=(14, 7))

    # Plot the psf-subtracted science images for each roll and integration
    for roll in range(len(files)):
        data = fits.getdata(files[roll])
        for integ in range(data.shape[0]):
            data_int = data[integ]
            ax = fig.add_subplot(grid[roll, integ])
            ax.imshow(data_int, vmin=-2, vmax=2, origin='lower', cmap='coolwarm')
            ax.set_title('Roll {} Int {}'.format(roll + 1, integ + 1))

    # Plot the final combined psf-subtracted science image
    i2d_file = os.path.join(coron3_dir, f'{product_name}_i2d.fits')
    ax = fig.add_subplot(grid[0:2, 2:4])
    data = fits.getdata(i2d_file)
    ax.imshow(data, vmin=-2, vmax=2, origin='lower', cmap='coolwarm')
    ax.set_title('Combined')

<matplotlib.image.AxesImage at 0x7f7e85612900>

Text(0.5, 1.0, 'Roll 1 Int 1')

<matplotlib.image.AxesImage at 0x7f7e85764f50>

Text(0.5, 1.0, 'Roll 1 Int 2')

<matplotlib.image.AxesImage at 0x7f7e85601a90>

Text(0.5, 1.0, 'Roll 2 Int 1')

<matplotlib.image.AxesImage at 0x7f7e9933e350>

Text(0.5, 1.0, 'Roll 2 Int 2')

<matplotlib.image.AxesImage at 0x7f7e981756d0>

Text(0.5, 1.0, 'Combined')

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