Advanced: NIRISS Imaging Tutorial Notebook#
Table of Contents#
Introduction
Examining uncalibrated data products
Stage 1 Processing
Stage 2 Processing
Stage 3 Processing
Visualize Detected Sources
Date published: January 24, 2024
1. Introduction#
In this notebook, we will process a NIRISS imaging dataset through the JWST calibration pipeline. The example dataset is from Program ID 1475 (PI: Boyer, CoI: Volk) which is a sky flat calibration program. NIRCam is used as the primary instrument with NIRISS as a coordinated parallel instrument. The NIRISS imaging dataset uses a 17-step dither pattern.
For illustrative purposes, we focus on data taken through the NIRISS F150W filter and start with uncalibrated data products. The files are named
jw01475006001_02201_000nn_nis_uncal.fits, where nn refers to the dither step number which ranges from 01 - 17. See the “File Naming Schemes” documentation to learn more about the file naming convention.
In this notebook, we assume all uncalibrated fits files are saved in a directory named 1475_f150w.
Install pipeline and dependencies#
To make sure that the pipeline version is compatabile with the steps discussed below and the required dependencies and packages are installed, you can create a fresh conda environment and install the provided requirements.txt file:
conda create -n niriss_imaging_pipeline python=3.11
conda activate niriss_imaging_pipeline
pip install -r requirements.txt
Imports#
import os
import glob
import zipfile
import numpy as np
import urllib.request
# For visualizing images
from jdaviz import Imviz
# Astropy routines for visualizing detected sources:
from astropy.table import Table
from astropy.coordinates import SkyCoord
# Configure CRDS
os.environ["CRDS_PATH"] = 'crds_cache'
os.environ["CRDS_SERVER_URL"] = "https://jwst-crds.stsci.edu"
# for JWST calibration pipeline
import jwst
from jwst import datamodels
from jwst.pipeline import Detector1Pipeline, Image2Pipeline, Image3Pipeline
from jwst.associations import asn_from_list
from jwst.associations.lib.rules_level3_base import DMS_Level3_Base
# To confirm which version of the pipeline you're running:
print(f"jwst pipeline version: {jwst.__version__}")
jwst pipeline version: 1.13.4
Download uncalibrated data products#
# APT program ID number:
pid = '01475'
# Set up directory to download uncalibrated data files:
data_dir = '1475_f150w/'
# Create directory if it does not exist
if not os.path.isdir(data_dir):
os.mkdir(data_dir)
# Download uncalibrated data from Box into current directory:
boxlink = 'https://data.science.stsci.edu/redirect/JWST/jwst-data_analysis_tools/niriss_imaging/1475_f150w.zip'
boxfile = os.path.join(data_dir, '1475_f150w.zip')
urllib.request.urlretrieve(boxlink, boxfile)
zf = zipfile.ZipFile(boxfile, 'r')
zf.extractall()
2. Examining uncalibrated data products#
uncal_files = sorted(glob.glob(os.path.join(data_dir, '*_uncal.fits')))
Look at the first file to determine exposure parameters and practice using JWST datamodels#
# print file name
print(uncal_files[0])
# Open file as JWST datamodel
examine = datamodels.open(uncal_files[0])
# Print out exposure info
print("Instrument: " + examine.meta.instrument.name)
print("Filter: " + examine.meta.instrument.filter)
print("Pupil: " + examine.meta.instrument.pupil)
print("Number of integrations: {}".format(examine.meta.exposure.nints))
print("Number of groups: {}".format(examine.meta.exposure.ngroups))
print("Readout pattern: " + examine.meta.exposure.readpatt)
print("Dither position number: {}".format(examine.meta.dither.position_number))
print("\n")
1475_f150w/jw01475006001_02201_00001_nis_uncal.fits
Instrument: NIRISS
Filter: CLEAR
Pupil: F150W
Number of integrations: 1
Number of groups: 16
Readout pattern: NIS
Dither position number: 1
From the above, we confirm that the data file is for the NIRISS instrument using the F150W filter in the Pupil Wheel crossed with the CLEAR filter in the Filter Wheel. This observation uses the NIS readout pattern, 16 groups per integration, and 1 integration per exposure. This data file is the 1st dither position in this exposure sequence. For more information about how JWST exposures are defined by up-the-ramp sampling, see the Understanding Exposure Times JDox article.
This metadata will be the same for all exposures in this observation other than the dither position number.
Display uncalibrated image#
We can visualize an uncalibrated dataset that will show detector artifacts that will be removed when calibrating the data through the DETECTOR1 stage of the pipeline. Uncalibrated data files thus are 4D: nintegrations x ngroups x nrows x ncols. Here, we are visualizing the full detector (i.e., all columns and rows) and the 1st group.
We are using the Imviz tool within the jdaviz package to visualize the NIRISS image.
# Create an Imviz instance and set up default viewer
imviz_uncal = Imviz()
viewer_uncal = imviz_uncal.default_viewer
# Read in the science array for our visualization dataset:
uncal_science = examine.data
# Load the dataset into Imviz
imviz_uncal.load_data(uncal_science[0, 0, :, :])
# Visualize the dataset:
imviz_uncal.show()
Adjust settings for the viewer:
viewer_uncal.stretch = 'sqrt'
viewer_uncal.set_colormap('Viridis')
viewer_uncal.cuts = '99.5%'
3. Stage 1 Processing #
Run the datasets through the Detector1 stage of the pipeline to apply detector level calibrations and create a countrate data product where slopes are fitted to the integration ramps. These *_rate.fits products are 2D (nrows x ncols), averaged over all integrations. 3D countrate data products (*_rateints.fits) are also created (nintegrations x nrows x ncols) which have the fitted ramp slopes for each integration.
The pipeline documentation discusses how to run the pipeline in the Python Interface, including how to configure pipeline steps and override reference files. By returning the results of the pipeline to a variable, the pipeline returns a datamodel. Note that the pipeline.call() method is preferred over the pipeline.run() method.
By default, all steps in the Detector1 stage of the pipeline are run for NIRISS except: the ipc correction step and the gain_scale step. Note that while the persistence step is set to run by default, this step does not automatically correct the science data for persistence. The persistence step creates a *_trapsfilled.fits file which is a model that records the number of traps filled at each pixel at the end of an exposure. This file would be used as an input to the persistence step, via the input_trapsfilled argument, to correct a science exposure for persistence. Since persistence is not well calibrated for NIRISS, we do not perform a persistence correction and thus turn off this step to speed up calibration and to not create files that will not be used in the subsequent analysis. This step can be turned off when running the pipeline in Python by doing:
rate_result = Detector1Pipeline.call(uncal,
steps={'persistence': {'skip': True}})
The charge_migration step is particularly important for NIRISS images to mitigate apparent flux loss in resampled images due to the spilling of charge from a central pixel into its neighboring pixels (see Goudfrooij et al. 2023 for details). Charge migration occurs when the accumulated charge in a central pixel exceeds a certain signal limit, which is ~25,000 ADU. This step is turned on by default for NIRISS imaging, Wide Field Slitless Spectroscopy (WFSS), and Aperture Masking Interferometry (AMI) modes when using CRDS contexts of jwst_1159.pmap or later. Different signal limits for each filter are provided by the pars-chargemigrationstep parameter files. Users can specify a different signal limit by running this step with the signal_threshold flag and entering another signal limit in units of ADU.
As of CRDS context jwst_1155.pmap and later, the jump step of the DETECTOR1 stage of the pipeline will remove residuals associated with snowballs for NIRISS imaging, WFSS, and AMI modes. The default parameters for this correction, where expand_large_events set to True turns on the snowball halo removal algorithm, are specified in the pars-jumpstep parameter reference files. Users may wish to alter parameters to optimize removal of snowball residuals. Available parameters are discussed in the Detection and Flagging of Showers and Snowballs in JWST Technical Report (Regan 2023).
# Define directory to save output from detector1
det1_dir = 'detector1/'
# Create directory if it does not exist
if not os.path.isdir(det1_dir):
os.mkdir(det1_dir)
# Run Detector1 stage of pipeline, specifying:
# output directory to save *_rate.fits files
# save_results flag set to True so the rate files are saved
# skipping the persistence step
for uncal in uncal_files:
rate_result = Detector1Pipeline.call(uncal,
output_dir=det1_dir,
save_results=True,
steps={'persistence': {'skip': True}})
2024-03-13 20:07:58,035 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:07:58,044 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:07:58,056 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:07:58,068 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:07:58,088 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:07:58,089 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:07:58,090 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:07:58,091 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:07:58,092 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:07:58,093 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:07:58,094 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:07:58,095 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:07:58,096 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:07:58,097 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:07:58,098 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:07:58,099 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:07:58,100 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:07:58,101 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:07:58,102 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:07:58,103 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:07:58,105 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:07:58,105 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:07:58,107 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:07:58,265 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00001_nis_uncal.fits',).
2024-03-13 20:07:58,275 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:07:58,595 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00001_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:07:58,599 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:07:58,599 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:07:58,600 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:07:58,600 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:07:58,601 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:07:58,601 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:07:58,602 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:07:58,603 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:07:58,603 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:07:58,604 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:07:58,605 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:07:59,390 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:07:59,391 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:07:59,819 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:07:59,820 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:07:59,824 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:08:00,000 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:00,001 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:08:00,025 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:08:00,547 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:08:00,728 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:00,729 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:08:00,752 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:08:00,796 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:00,797 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:00,803 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:03,040 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4223 saturated pixels
2024-03-13 20:08:03,071 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:08:03,083 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:08:03,254 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:03,255 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:08:03,256 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:08:03,260 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:08:03,426 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:03,427 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:08:03,451 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:08:03,659 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:08:03,828 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:03,830 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:08:03,933 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:08:03,933 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:08:03,934 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:08:03,934 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:08:03,935 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:08:03,935 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:08:03,936 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:08:03,937 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:08:08,330 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:08:08,496 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:08,497 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:08:08,521 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:08:08,594 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:08,596 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:08,601 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:08:09,243 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:08:09,404 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:09,405 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:08:09,406 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:08:09,410 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:08:09,573 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:09,574 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:08:09,599 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:08:09,948 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:08:09,949 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:08:10,623 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:08:10,799 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:10,800 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:08:10,905 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:08:11,400 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:08:11,566 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:11,568 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:08:11,580 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:08:11,580 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:08:11,593 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:08:11,641 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:08:11,873 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:08:49,077 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:08:49,584 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 2
2024-03-13 20:08:49,585 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 37.7111 sec
2024-03-13 20:08:49,673 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 38.092981
2024-03-13 20:08:49,681 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:08:49,847 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:08:49,848 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:08:49,884 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:08:49,885 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:08:49,952 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:08:49,952 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:09:53,799 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:09:53,799 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:10:08,891 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:10:09,047 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:10:09,049 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:09,095 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:10:09,095 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:10:09,102 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:10:09,261 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00001_nis_uncal.fits>,).
2024-03-13 20:10:09,262 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:09,314 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:10:09,314 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:10:09,321 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:10:09,483 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00001_nis_rateints.fits
2024-03-13 20:10:09,483 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:10:09,484 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:10:09,644 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00001_nis_rate.fits
2024-03-13 20:10:09,644 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:10:09,963 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:10:09,972 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:10:09,982 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:10:09,994 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:10:10,010 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:10:10,011 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:10:10,012 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:10:10,013 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:10:10,014 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:10:10,015 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:10:10,016 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:10:10,017 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:10:10,018 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:10:10,019 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:10:10,020 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:10:10,021 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:10:10,022 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:10:10,023 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:10:10,024 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:10:10,025 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:10:10,026 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:10:10,027 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:10:10,028 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:10:10,186 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00002_nis_uncal.fits',).
2024-03-13 20:10:10,196 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:10:10,516 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00002_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:10:10,519 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:10:10,520 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:10:10,520 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:10:10,521 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:10:10,521 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:10:10,522 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:10:10,522 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:10:10,523 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:10:10,523 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:10:10,524 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:10:10,526 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:10:11,058 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:11,059 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:11,156 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:10:11,157 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:10:11,162 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:10:11,327 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:11,328 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:11,352 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:10:11,625 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:10:11,784 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:11,785 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:10:11,809 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:10:11,852 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:11,852 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:11,856 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:13,576 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4249 saturated pixels
2024-03-13 20:10:13,601 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:10:13,613 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:10:13,775 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:13,776 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:13,777 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:10:13,781 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:10:13,933 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:13,934 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:13,958 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:10:14,152 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:10:14,319 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:14,321 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:10:14,436 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:10:14,437 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:10:14,437 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:10:14,438 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:10:14,438 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:10:14,438 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:10:14,439 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:10:14,440 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:10:18,507 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:10:18,677 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:18,678 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:10:18,702 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:10:18,760 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:18,761 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:18,765 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:10:19,347 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:10:19,513 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:19,514 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:10:19,515 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:10:19,519 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:10:19,687 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:19,688 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:10:19,715 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:10:19,923 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:10:19,923 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:10:20,212 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:10:20,379 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:20,380 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:10:20,480 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:10:20,953 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:10:21,116 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:21,118 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:10:21,130 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:10:21,130 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:10:21,143 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:10:21,191 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:10:21,412 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:10:58,144 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:10:58,601 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 7
2024-03-13 20:10:58,602 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 37.1896 sec
2024-03-13 20:10:58,689 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 37.558815
2024-03-13 20:10:58,697 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:10:58,849 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:10:58,850 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:10:58,884 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:10:58,885 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:10:58,952 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:10:58,953 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:12:06,290 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:12:06,291 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:12:21,432 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:12:21,598 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:12:21,600 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:21,645 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:12:21,645 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:12:21,652 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:12:21,805 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00002_nis_uncal.fits>,).
2024-03-13 20:12:21,807 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:21,858 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:12:21,858 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:12:21,866 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:12:22,021 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00002_nis_rateints.fits
2024-03-13 20:12:22,021 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:12:22,022 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:12:22,180 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00002_nis_rate.fits
2024-03-13 20:12:22,181 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:12:22,477 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:12:22,487 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:12:22,497 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:12:22,508 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:12:22,525 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:12:22,527 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:12:22,527 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:12:22,529 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:12:22,530 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:12:22,531 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:12:22,532 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:12:22,534 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:12:22,534 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:12:22,536 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:12:22,537 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:12:22,538 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:12:22,539 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:12:22,540 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:12:22,541 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:12:22,542 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:12:22,544 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:12:22,545 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:12:22,546 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:12:22,702 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00003_nis_uncal.fits',).
2024-03-13 20:12:22,712 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:12:23,011 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00003_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:12:23,014 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:12:23,014 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:12:23,015 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:12:23,015 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:12:23,016 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:12:23,017 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:12:23,017 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:12:23,017 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:12:23,018 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:12:23,019 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:12:23,020 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:12:23,523 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:23,525 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:23,608 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:12:23,609 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:12:23,613 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:12:23,764 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:23,765 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:23,788 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:12:24,044 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:12:24,210 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:24,211 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:12:24,234 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:12:24,277 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:24,278 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:24,282 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:26,057 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4591 saturated pixels
2024-03-13 20:12:26,086 - stpipe.Detector1Pipeline.saturation - INFO - Detected 2 A/D floor pixels
2024-03-13 20:12:26,098 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:12:26,262 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:26,263 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:26,263 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:12:26,267 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:12:26,415 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:26,416 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:26,440 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:12:26,641 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:12:26,792 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:26,793 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:12:26,884 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:12:26,885 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:12:26,885 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:12:26,886 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:12:26,886 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:12:26,887 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:12:26,887 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:12:26,887 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:12:31,056 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:12:31,219 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:31,220 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:12:31,243 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:12:31,308 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:31,308 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:31,312 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:12:31,883 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:12:32,039 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:32,041 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:12:32,041 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:12:32,045 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:12:32,204 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:32,205 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:12:32,229 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:12:32,430 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:12:32,430 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:12:32,701 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:12:32,854 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:32,856 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:12:32,955 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:12:33,435 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:12:33,601 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:12:33,603 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:12:33,614 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:12:33,615 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:12:33,627 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:12:33,670 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:12:33,870 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:13:10,877 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:13:11,399 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 10
2024-03-13 20:13:11,399 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 37.5285 sec
2024-03-13 20:13:11,487 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 37.872143
2024-03-13 20:13:11,495 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:13:11,653 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:13:11,654 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:13:11,688 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:13:11,689 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:13:11,752 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:13:11,752 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:14:14,548 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:14:14,549 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:14:30,100 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:14:30,262 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:14:30,263 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:30,308 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:14:30,309 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:14:30,316 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:14:30,464 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00003_nis_uncal.fits>,).
2024-03-13 20:14:30,466 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:30,515 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:14:30,515 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:14:30,522 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:14:30,679 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00003_nis_rateints.fits
2024-03-13 20:14:30,680 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:14:30,681 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:14:30,838 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00003_nis_rate.fits
2024-03-13 20:14:30,839 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:14:31,135 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:14:31,144 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:14:31,154 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:14:31,165 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:14:31,182 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:14:31,183 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:14:31,184 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:14:31,185 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:14:31,186 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:14:31,187 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:14:31,188 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:14:31,189 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:14:31,190 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:14:31,191 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:14:31,192 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:14:31,193 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:14:31,194 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:14:31,194 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:14:31,195 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:14:31,197 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:14:31,199 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:14:31,200 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:14:31,202 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:14:31,358 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00004_nis_uncal.fits',).
2024-03-13 20:14:31,367 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:14:31,661 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00004_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:14:31,664 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:14:31,665 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:14:31,666 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:14:31,666 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:14:31,667 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:14:31,667 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:14:31,668 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:14:31,668 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:14:31,669 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:14:31,669 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:14:31,670 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:14:32,172 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:32,173 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:32,257 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:14:32,258 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:14:32,262 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:14:32,418 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:32,419 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:32,442 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:14:32,731 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:14:32,884 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:32,885 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:14:32,909 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:14:32,951 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:32,952 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:32,956 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:34,758 - stpipe.Detector1Pipeline.saturation - INFO - Detected 5018 saturated pixels
2024-03-13 20:14:34,788 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:14:34,800 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:14:34,956 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:34,957 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:34,958 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:14:34,962 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:14:35,106 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:35,107 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:35,131 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:14:35,365 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:14:35,514 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:35,516 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:14:35,607 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:14:35,608 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:14:35,608 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:14:35,608 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:14:35,609 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:14:35,610 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:14:35,610 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:14:35,610 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:14:39,829 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:14:39,984 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:39,985 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:14:40,009 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:14:40,065 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:40,066 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:40,070 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:14:40,633 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:14:40,786 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:40,788 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:14:40,789 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:14:40,793 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:14:40,934 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:40,936 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:14:40,959 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:14:41,165 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:14:41,166 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:14:41,414 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:14:41,581 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:41,583 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:14:41,732 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:14:42,213 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:14:42,372 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:14:42,374 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:14:42,386 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:14:42,387 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:14:42,400 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:14:42,442 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:14:42,639 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:15:18,468 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:15:18,958 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 5
2024-03-13 20:15:18,959 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.3191 sec
2024-03-13 20:15:19,046 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.659411
2024-03-13 20:15:19,054 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:15:19,216 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:15:19,217 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:15:19,252 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:15:19,253 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:15:19,320 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:15:19,320 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:16:23,435 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:16:23,435 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:16:38,943 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:16:39,098 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:16:39,100 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:39,145 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:16:39,146 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:16:39,153 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:16:39,319 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00004_nis_uncal.fits>,).
2024-03-13 20:16:39,320 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:39,369 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:16:39,369 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:16:39,376 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:16:39,531 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00004_nis_rateints.fits
2024-03-13 20:16:39,532 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:16:39,532 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:16:39,690 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00004_nis_rate.fits
2024-03-13 20:16:39,691 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:16:39,986 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:16:39,995 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:16:40,004 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:16:40,016 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:16:40,033 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:16:40,034 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:16:40,035 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:16:40,037 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:16:40,038 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:16:40,039 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:16:40,040 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:16:40,041 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:16:40,042 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:16:40,043 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:16:40,044 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:16:40,045 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:16:40,046 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:16:40,047 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:16:40,048 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:16:40,049 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:16:40,050 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:16:40,051 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:16:40,052 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:16:40,215 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00005_nis_uncal.fits',).
2024-03-13 20:16:40,224 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:16:40,521 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00005_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:16:40,524 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:16:40,525 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:16:40,525 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:16:40,525 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:16:40,526 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:16:40,527 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:16:40,527 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:16:40,527 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:16:40,528 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:16:40,528 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:16:40,530 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:16:41,031 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:41,032 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:41,130 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:16:41,130 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:16:41,135 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:16:41,301 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:41,303 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:41,326 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:16:41,541 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:16:41,706 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:41,707 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:16:41,731 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:16:41,773 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:41,774 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:41,778 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:43,538 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4873 saturated pixels
2024-03-13 20:16:43,557 - stpipe.Detector1Pipeline.saturation - INFO - Detected 3 A/D floor pixels
2024-03-13 20:16:43,569 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:16:43,723 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:43,724 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:43,725 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:16:43,728 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:16:43,886 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:43,888 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:43,911 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:16:44,067 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:16:44,227 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:44,229 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:16:44,328 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:16:44,329 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:16:44,329 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:16:44,330 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:16:44,330 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:16:44,330 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:16:44,331 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:16:44,331 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:16:48,533 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:16:48,694 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:48,695 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:16:48,719 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:16:48,777 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:48,778 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:48,785 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:16:49,332 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:16:49,495 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:49,496 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:16:49,497 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:16:49,501 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:16:49,654 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:49,655 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:16:49,679 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:16:49,889 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:16:49,890 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:16:50,190 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:16:50,357 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:50,358 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:16:50,415 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:16:50,891 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:16:51,053 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:16:51,055 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:16:51,067 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:16:51,068 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:16:51,081 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:16:51,123 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:16:51,339 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:17:26,883 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:17:27,408 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 9
2024-03-13 20:17:27,408 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.0682 sec
2024-03-13 20:17:27,497 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.429343
2024-03-13 20:17:27,505 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:17:27,659 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:17:27,661 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:17:27,695 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:17:27,696 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:17:27,759 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:17:27,760 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:18:31,217 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:18:31,218 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:18:46,054 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:18:46,218 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:18:46,219 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:46,265 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:18:46,266 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:18:46,273 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:18:46,425 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00005_nis_uncal.fits>,).
2024-03-13 20:18:46,427 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:46,476 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:18:46,476 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:18:46,483 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:18:46,638 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00005_nis_rateints.fits
2024-03-13 20:18:46,638 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:18:46,639 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:18:46,798 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00005_nis_rate.fits
2024-03-13 20:18:46,798 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:18:47,094 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:18:47,103 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:18:47,112 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:18:47,124 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:18:47,141 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:18:47,142 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:18:47,142 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:18:47,143 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:18:47,145 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:18:47,145 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:18:47,146 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:18:47,147 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:18:47,148 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:18:47,149 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:18:47,150 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:18:47,151 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:18:47,152 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:18:47,153 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:18:47,154 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:18:47,155 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:18:47,157 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:18:47,159 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:18:47,161 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:18:47,326 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00006_nis_uncal.fits',).
2024-03-13 20:18:47,335 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:18:47,633 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00006_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:18:47,636 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:18:47,636 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:18:47,637 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:18:47,637 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:18:47,638 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:18:47,638 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:18:47,639 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:18:47,640 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:18:47,640 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:18:47,641 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:18:47,642 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:18:48,128 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:48,129 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:48,226 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:18:48,226 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:18:48,230 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:18:48,387 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:48,388 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:48,412 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:18:48,671 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:18:48,833 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:48,834 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:18:48,861 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:18:48,905 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:48,905 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:48,909 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:50,654 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4452 saturated pixels
2024-03-13 20:18:50,679 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:18:50,690 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:18:50,844 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:50,846 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:50,846 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:18:50,850 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:18:50,998 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:51,000 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:51,023 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:18:51,196 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:18:51,350 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:51,351 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:18:51,436 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:18:51,436 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:18:51,437 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:18:51,437 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:18:51,438 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:18:51,438 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:18:51,439 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:18:51,439 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:18:55,696 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:18:55,851 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:55,852 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:18:55,875 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:18:55,930 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:55,931 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:55,935 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:18:56,546 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:18:56,707 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:56,708 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:18:56,709 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:18:56,712 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:18:56,861 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:56,862 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:18:56,886 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:18:57,091 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:18:57,092 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:18:57,337 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:18:57,498 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:57,499 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:18:57,647 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:18:58,137 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:18:58,302 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:18:58,304 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:18:58,316 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:18:58,316 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:18:58,329 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:18:58,371 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:18:58,549 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:19:34,219 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:19:34,848 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 5
2024-03-13 20:19:34,848 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.2991 sec
2024-03-13 20:19:34,936 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.620202
2024-03-13 20:19:34,944 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:19:35,097 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:19:35,098 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:19:35,133 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:19:35,133 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:19:35,197 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:19:35,197 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:20:36,871 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:20:36,872 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:20:51,801 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:20:51,950 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:20:51,951 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:51,996 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:20:51,996 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:20:52,003 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:20:52,147 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00006_nis_uncal.fits>,).
2024-03-13 20:20:52,148 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:52,198 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:20:52,198 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:20:52,205 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:20:52,360 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00006_nis_rateints.fits
2024-03-13 20:20:52,360 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:20:52,361 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:20:52,518 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00006_nis_rate.fits
2024-03-13 20:20:52,518 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:20:52,813 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:20:52,822 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:20:52,831 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:20:52,842 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:20:52,859 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:20:52,860 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:20:52,862 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:20:52,862 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:20:52,864 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:20:52,865 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:20:52,866 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:20:52,867 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:20:52,868 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:20:52,869 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:20:52,870 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:20:52,871 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:20:52,872 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:20:52,873 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:20:52,874 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:20:52,874 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:20:52,876 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:20:52,878 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:20:52,879 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:20:53,022 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00007_nis_uncal.fits',).
2024-03-13 20:20:53,032 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:20:53,324 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00007_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:20:53,327 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:20:53,328 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:20:53,328 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:20:53,329 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:20:53,329 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:20:53,330 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:20:53,330 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:20:53,331 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:20:53,331 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:20:53,333 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:20:53,333 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:20:53,793 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:53,795 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:53,888 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:20:53,889 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:20:53,893 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:20:54,037 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:54,039 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:54,062 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:20:54,274 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:20:54,424 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:54,425 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:20:54,448 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:20:54,490 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:20:54,491 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:20:54,494 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:20:56,306 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4322 saturated pixels
2024-03-13 20:20:56,331 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:20:56,343 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:20:56,493 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:56,494 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:56,495 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:20:56,499 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:20:56,634 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:56,635 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:20:56,659 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:20:56,814 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:20:56,966 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:20:56,967 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:20:57,041 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:20:57,042 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:20:57,043 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:20:57,043 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:20:57,043 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:20:57,044 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:20:57,044 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:20:57,044 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:21:01,203 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:21:01,352 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:01,353 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:21:01,376 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:21:01,432 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:21:01,433 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:21:01,437 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:21:02,004 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:21:02,151 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:02,152 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:21:02,153 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:21:02,157 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:21:02,289 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:02,290 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:21:02,314 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:21:02,485 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:21:02,486 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:21:02,800 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:21:02,948 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:02,950 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:21:03,004 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:21:03,495 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:21:03,642 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:03,644 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:21:03,655 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:21:03,656 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:21:03,668 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:21:03,710 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:21:03,902 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:21:39,311 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:21:39,771 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 6
2024-03-13 20:21:39,771 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 35.8684 sec
2024-03-13 20:21:39,858 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.202728
2024-03-13 20:21:39,866 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:21:40,015 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:21:40,016 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:21:40,051 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:21:40,051 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:21:40,118 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:21:40,118 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:22:42,402 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:22:42,403 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:22:57,991 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:22:58,139 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:22:58,140 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:22:58,185 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:22:58,186 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:22:58,192 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:22:58,339 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00007_nis_uncal.fits>,).
2024-03-13 20:22:58,340 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:22:58,390 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:22:58,390 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:22:58,397 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:22:58,552 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00007_nis_rateints.fits
2024-03-13 20:22:58,553 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:22:58,554 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:22:58,712 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00007_nis_rate.fits
2024-03-13 20:22:58,713 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:22:59,008 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:22:59,017 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:22:59,027 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:22:59,038 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:22:59,055 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:22:59,056 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:22:59,056 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:22:59,057 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:22:59,058 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:22:59,059 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:22:59,060 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:22:59,061 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:22:59,062 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:22:59,063 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:22:59,064 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:22:59,065 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:22:59,066 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:22:59,066 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:22:59,067 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:22:59,068 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:22:59,070 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:22:59,071 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:22:59,072 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:22:59,237 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00008_nis_uncal.fits',).
2024-03-13 20:22:59,246 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:22:59,545 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00008_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:22:59,549 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:22:59,549 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:22:59,550 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:22:59,550 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:22:59,551 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:22:59,551 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:22:59,552 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:22:59,552 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:22:59,553 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:22:59,554 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:22:59,555 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:23:00,027 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:00,028 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:23:00,104 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:23:00,105 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:23:00,109 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:23:00,260 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:00,262 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:23:00,285 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:23:00,478 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:23:00,636 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:00,638 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:23:00,661 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:23:00,703 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:00,704 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:00,707 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:02,398 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4334 saturated pixels
2024-03-13 20:23:02,417 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:23:02,429 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:23:02,597 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:02,598 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:23:02,599 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:23:02,603 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:23:02,762 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:02,763 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:23:02,786 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:23:02,959 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:23:03,116 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:03,117 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:23:03,203 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:23:03,204 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:23:03,204 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:23:03,205 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:23:03,205 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:23:03,205 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:23:03,206 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:23:03,206 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:23:07,362 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:23:07,523 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:07,524 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:23:07,548 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:23:07,606 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:07,606 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:07,610 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:23:08,144 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:23:08,306 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:08,308 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:23:08,308 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:23:08,312 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:23:08,463 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:08,465 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:23:08,489 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:23:08,699 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:23:08,700 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:23:09,067 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:23:09,239 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:09,240 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:23:09,295 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:23:09,767 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:23:09,943 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:09,946 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:23:09,958 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:23:09,958 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:23:09,971 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:23:10,015 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:23:10,215 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:23:46,441 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:23:47,017 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 10
2024-03-13 20:23:47,018 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.8024 sec
2024-03-13 20:23:47,107 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 37.149333
2024-03-13 20:23:47,115 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:23:47,280 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:23:47,281 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:23:47,316 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:23:47,317 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:23:47,384 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:23:47,384 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:24:49,304 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:24:49,305 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:25:04,684 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:25:04,837 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:25:04,838 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:04,884 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:25:04,884 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:25:04,891 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:25:05,045 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00008_nis_uncal.fits>,).
2024-03-13 20:25:05,047 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:05,097 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:25:05,097 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:25:05,104 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:25:05,261 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00008_nis_rateints.fits
2024-03-13 20:25:05,261 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:25:05,262 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:25:05,421 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00008_nis_rate.fits
2024-03-13 20:25:05,421 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:25:05,720 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:25:05,729 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:25:05,738 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:25:05,749 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:25:05,766 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:25:05,767 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:25:05,768 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:25:05,769 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:25:05,770 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:25:05,771 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:25:05,772 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:25:05,773 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:25:05,773 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:25:05,774 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:25:05,775 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:25:05,776 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:25:05,777 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:25:05,778 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:25:05,779 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:25:05,780 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:25:05,781 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:25:05,782 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:25:05,783 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:25:05,938 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00009_nis_uncal.fits',).
2024-03-13 20:25:05,948 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:25:06,248 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00009_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:25:06,253 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:25:06,253 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:25:06,254 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:25:06,255 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:25:06,255 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:25:06,256 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:25:06,256 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:25:06,256 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:25:06,257 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:25:06,257 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:25:06,259 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:25:06,735 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:06,736 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:06,813 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:25:06,814 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:25:06,818 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:25:06,975 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:06,977 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:07,000 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:25:07,264 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:25:07,425 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:07,426 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:25:07,449 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:25:07,491 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:07,492 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:07,496 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:09,311 - stpipe.Detector1Pipeline.saturation - INFO - Detected 5184 saturated pixels
2024-03-13 20:25:09,341 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:25:09,353 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:25:09,504 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:09,505 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:09,506 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:25:09,509 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:25:09,649 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:09,650 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:09,674 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:25:09,862 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:25:10,028 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:10,029 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:25:10,103 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:25:10,103 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:25:10,104 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:25:10,104 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:25:10,105 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:25:10,105 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:25:10,106 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:25:10,106 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:25:14,309 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:25:14,465 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:14,466 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:25:14,489 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:25:14,546 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:14,547 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:14,550 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:25:15,146 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:25:15,300 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:15,302 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:25:15,302 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:25:15,306 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:25:15,455 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:15,456 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:25:15,480 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:25:15,657 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:25:15,658 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:25:15,905 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:25:16,057 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:16,058 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:25:16,167 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:25:16,627 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:25:16,779 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:16,781 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:25:16,792 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:25:16,792 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:25:16,805 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:25:16,847 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:25:17,044 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:25:52,751 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:25:53,253 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 7
2024-03-13 20:25:53,253 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.2087 sec
2024-03-13 20:25:53,341 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.549121
2024-03-13 20:25:53,350 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:25:53,497 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:25:53,498 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:25:53,532 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:25:53,532 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:25:53,596 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:25:53,596 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:26:57,137 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:26:57,138 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:27:12,302 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:27:12,450 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:27:12,451 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:12,496 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:27:12,497 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:27:12,503 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:27:12,649 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00009_nis_uncal.fits>,).
2024-03-13 20:27:12,650 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:12,700 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:27:12,700 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:27:12,707 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:27:12,861 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00009_nis_rateints.fits
2024-03-13 20:27:12,862 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:27:12,863 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:27:13,023 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00009_nis_rate.fits
2024-03-13 20:27:13,023 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:27:13,317 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:27:13,326 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:27:13,336 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:27:13,347 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:27:13,364 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:27:13,365 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:27:13,365 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:27:13,366 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:27:13,367 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:27:13,368 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:27:13,369 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:27:13,370 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:27:13,371 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:27:13,372 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:27:13,373 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:27:13,374 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:27:13,375 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:27:13,376 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:27:13,377 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:27:13,378 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:27:13,379 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:27:13,381 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:27:13,381 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:27:13,529 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00010_nis_uncal.fits',).
2024-03-13 20:27:13,541 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:27:13,836 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00010_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:27:13,840 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:27:13,840 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:27:13,841 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:27:13,841 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:27:13,842 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:27:13,842 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:27:13,843 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:27:13,843 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:27:13,844 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:27:13,844 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:27:13,845 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:27:14,320 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:14,321 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:14,398 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:27:14,398 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:27:14,402 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:27:14,550 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:14,552 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:14,575 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:27:14,769 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:27:14,926 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:14,928 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:27:14,951 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:27:14,993 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:14,994 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:14,997 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:16,726 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4877 saturated pixels
2024-03-13 20:27:16,745 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:27:16,757 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:27:16,909 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:16,910 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:16,911 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:27:16,915 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:27:17,054 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:17,055 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:17,078 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:27:17,234 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:27:17,382 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:17,383 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:27:17,570 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:27:17,571 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:27:17,571 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:27:17,572 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:27:17,572 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:27:17,573 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:27:17,573 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:27:17,574 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:27:21,798 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:27:21,948 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:21,949 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:27:21,972 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:27:22,033 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:22,033 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:22,037 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:27:22,571 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:27:22,719 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:22,720 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:27:22,721 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:27:22,724 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:27:22,859 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:22,860 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:27:22,883 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:27:23,083 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:27:23,083 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:27:23,357 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:27:23,509 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:23,510 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:27:23,567 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:27:24,021 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:27:24,171 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:27:24,173 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:27:24,185 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:27:24,185 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:27:24,198 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:27:24,240 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:27:24,531 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:27:59,588 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:28:00,058 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 2
2024-03-13 20:28:00,059 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 35.5267 sec
2024-03-13 20:28:00,145 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 35.960480
2024-03-13 20:28:00,154 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:28:00,305 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:28:00,306 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:28:00,340 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:28:00,341 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:28:00,408 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:28:00,408 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:29:02,968 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:29:02,969 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:29:17,459 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:29:17,608 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:29:17,610 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:17,655 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:29:17,655 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:29:17,662 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:29:17,805 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00010_nis_uncal.fits>,).
2024-03-13 20:29:17,807 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:17,857 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:29:17,857 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:29:17,864 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:29:18,019 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00010_nis_rateints.fits
2024-03-13 20:29:18,020 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:29:18,021 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:29:18,178 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00010_nis_rate.fits
2024-03-13 20:29:18,178 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:29:18,477 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:29:18,486 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:29:18,496 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:29:18,507 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:29:18,524 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:29:18,525 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:29:18,526 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:29:18,527 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:29:18,528 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:29:18,528 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:29:18,529 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:29:18,530 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:29:18,531 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:29:18,532 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:29:18,533 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:29:18,534 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:29:18,535 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:29:18,535 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:29:18,536 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:29:18,537 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:29:18,539 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:29:18,540 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:29:18,541 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:29:18,690 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00011_nis_uncal.fits',).
2024-03-13 20:29:18,699 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:29:18,994 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00011_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:29:18,997 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:29:18,998 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:29:18,998 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:29:18,999 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:29:18,999 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:29:19,000 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:29:19,000 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:29:19,001 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:29:19,001 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:29:19,002 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:29:19,003 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:29:19,468 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:19,469 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:19,570 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:29:19,571 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:29:19,575 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:29:19,723 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:19,724 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:19,748 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:29:19,936 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:29:20,087 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:20,088 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:29:20,111 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:29:20,153 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:20,153 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:20,157 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:21,842 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4341 saturated pixels
2024-03-13 20:29:21,861 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:29:21,873 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:29:22,021 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:22,022 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:22,023 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:29:22,027 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:29:22,162 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:22,163 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:22,188 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:29:22,399 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:29:22,549 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:22,551 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:29:22,664 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:29:22,665 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:29:22,666 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:29:22,666 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:29:22,666 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:29:22,667 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:29:22,667 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:29:22,668 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:29:26,867 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:29:27,018 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:27,020 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:29:27,043 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:29:27,099 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:27,100 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:27,103 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:29:27,664 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:29:27,816 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:27,817 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:29:27,817 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:29:27,822 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:29:27,960 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:27,961 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:29:27,984 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:29:28,156 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:29:28,156 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:29:28,471 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:29:28,620 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:28,622 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:29:28,679 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:29:29,131 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:29:29,281 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:29:29,283 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:29:29,295 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:29:29,295 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:29:29,308 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:29:29,350 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:29:29,610 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:30:05,919 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:30:06,340 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 5
2024-03-13 20:30:06,340 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.7301 sec
2024-03-13 20:30:06,428 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 37.133381
2024-03-13 20:30:06,436 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:30:06,587 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:30:06,589 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:30:06,623 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:30:06,624 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:30:06,686 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:30:06,687 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:31:08,208 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:31:08,209 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:31:23,153 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:31:23,306 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:31:23,307 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:23,353 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:31:23,353 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:31:23,360 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:31:23,503 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00011_nis_uncal.fits>,).
2024-03-13 20:31:23,505 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:23,555 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:31:23,555 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:31:23,563 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:31:23,717 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00011_nis_rateints.fits
2024-03-13 20:31:23,717 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:31:23,718 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:31:23,875 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00011_nis_rate.fits
2024-03-13 20:31:23,876 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:31:24,172 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:31:24,182 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:31:24,192 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:31:24,203 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:31:24,219 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:31:24,220 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:31:24,221 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:31:24,222 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:31:24,223 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:31:24,224 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:31:24,225 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:31:24,226 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:31:24,226 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:31:24,227 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:31:24,228 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:31:24,229 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:31:24,230 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:31:24,231 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:31:24,232 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:31:24,233 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:31:24,234 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:31:24,235 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:31:24,236 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:31:24,385 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00012_nis_uncal.fits',).
2024-03-13 20:31:24,394 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:31:24,691 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00012_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:31:24,694 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:31:24,695 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:31:24,695 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:31:24,696 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:31:24,696 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:31:24,697 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:31:24,697 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:31:24,698 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:31:24,698 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:31:24,699 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:31:24,700 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:31:25,169 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:25,170 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:25,268 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:31:25,268 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:31:25,272 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:31:25,419 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:25,420 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:25,443 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:31:25,648 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:31:25,797 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:25,799 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:31:25,823 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:31:25,865 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:25,865 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:25,869 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:27,655 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4024 saturated pixels
2024-03-13 20:31:27,673 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:31:27,685 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:31:27,834 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:27,835 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:27,835 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:31:27,839 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:31:27,975 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:27,977 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:28,001 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:31:28,155 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:31:28,303 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:28,305 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:31:28,440 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:31:28,441 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:31:28,441 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:31:28,442 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:31:28,442 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:31:28,443 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:31:28,443 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:31:28,444 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:31:32,714 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:31:32,861 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:32,862 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:31:32,885 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:31:32,942 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:32,942 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:32,946 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:31:33,544 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:31:33,693 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:33,694 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:31:33,695 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:31:33,699 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:31:33,834 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:33,835 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:31:33,859 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:31:34,058 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:31:34,058 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:31:34,373 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:31:34,518 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:34,519 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:31:34,572 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:31:34,990 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:31:35,140 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:31:35,142 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:31:35,153 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:31:35,153 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:31:35,166 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:31:35,209 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:31:35,467 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:32:10,943 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:32:11,600 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 6
2024-03-13 20:32:11,601 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.133 sec
2024-03-13 20:32:11,692 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.539277
2024-03-13 20:32:11,700 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:32:11,847 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:32:11,848 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:32:11,882 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:32:11,883 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:32:11,946 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:32:11,946 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:33:14,374 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:33:14,375 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:33:29,694 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:33:29,844 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:33:29,845 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:29,891 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:33:29,891 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:33:29,898 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:33:30,039 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00012_nis_uncal.fits>,).
2024-03-13 20:33:30,040 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:30,089 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:33:30,089 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:33:30,096 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:33:30,249 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00012_nis_rateints.fits
2024-03-13 20:33:30,250 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:33:30,251 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:33:30,407 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00012_nis_rate.fits
2024-03-13 20:33:30,408 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:33:30,706 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:33:30,714 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:33:30,725 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:33:30,736 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:33:30,753 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:33:30,753 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:33:30,754 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:33:30,755 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:33:30,756 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:33:30,757 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:33:30,758 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:33:30,759 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:33:30,760 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:33:30,761 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:33:30,762 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:33:30,764 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:33:30,765 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:33:30,766 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:33:30,768 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:33:30,769 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:33:30,770 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:33:30,772 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:33:30,773 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:33:30,921 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00013_nis_uncal.fits',).
2024-03-13 20:33:30,931 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:33:31,225 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00013_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:33:31,229 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:33:31,230 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:33:31,230 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:33:31,231 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:33:31,231 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:33:31,232 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:33:31,233 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:33:31,233 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:33:31,233 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:33:31,234 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:33:31,235 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:33:31,701 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:31,703 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:31,803 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:33:31,804 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:33:31,808 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:33:31,955 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:31,956 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:31,979 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:33:32,170 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:33:32,322 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:32,323 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:33:32,347 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:33:32,388 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:32,388 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:32,392 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:34,083 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4397 saturated pixels
2024-03-13 20:33:34,102 - stpipe.Detector1Pipeline.saturation - INFO - Detected 2 A/D floor pixels
2024-03-13 20:33:34,113 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:33:34,263 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:34,264 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:34,265 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:33:34,269 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:33:34,405 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:34,406 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:34,429 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:33:34,588 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:33:34,738 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:34,739 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:33:34,881 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:33:34,882 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:33:34,882 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:33:34,883 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:33:34,883 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:33:34,883 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:33:34,884 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:33:34,884 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:33:38,927 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:33:39,076 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:39,077 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:33:39,101 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:33:39,157 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:39,157 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:39,161 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:33:39,767 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:33:39,919 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:39,920 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:33:39,920 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:33:39,924 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:33:40,065 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:40,067 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:33:40,090 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:33:40,297 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:33:40,297 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:33:40,621 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:33:40,769 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:40,770 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:33:40,829 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:33:41,305 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:33:41,455 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:33:41,457 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:33:41,469 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:33:41,469 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:33:41,482 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:33:41,524 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:33:41,779 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:34:17,344 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:34:17,843 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 10
2024-03-13 20:34:17,843 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.0633 sec
2024-03-13 20:34:17,930 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.461886
2024-03-13 20:34:17,939 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:34:18,085 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:34:18,086 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:34:18,121 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:34:18,121 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:34:18,184 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:34:18,184 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:35:20,505 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:35:20,505 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:35:35,510 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:35:35,661 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:35:35,662 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:35,707 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:35:35,707 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:35:35,714 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:35:35,856 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00013_nis_uncal.fits>,).
2024-03-13 20:35:35,857 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:35,907 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:35:35,907 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:35:35,914 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:35:36,069 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00013_nis_rateints.fits
2024-03-13 20:35:36,069 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:35:36,070 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:35:36,228 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00013_nis_rate.fits
2024-03-13 20:35:36,228 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:35:36,522 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:35:36,531 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:35:36,540 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:35:36,551 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:35:36,568 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:35:36,569 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:35:36,570 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:35:36,571 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:35:36,572 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:35:36,573 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:35:36,573 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:35:36,574 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:35:36,575 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:35:36,576 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:35:36,578 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:35:36,579 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:35:36,580 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:35:36,581 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:35:36,582 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:35:36,583 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:35:36,585 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:35:36,586 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:35:36,587 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:35:36,737 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00014_nis_uncal.fits',).
2024-03-13 20:35:36,746 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:35:37,041 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00014_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:35:37,044 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:35:37,045 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:35:37,045 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:35:37,046 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:35:37,046 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:35:37,047 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:35:37,047 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:35:37,047 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:35:37,048 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:35:37,048 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:35:37,050 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:35:37,520 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:37,521 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:37,575 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:35:37,576 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:35:37,580 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:35:37,733 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:37,734 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:37,758 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:35:38,010 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:35:38,158 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:38,159 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:35:38,183 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:35:38,225 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:38,225 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:38,229 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:39,911 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4581 saturated pixels
2024-03-13 20:35:39,930 - stpipe.Detector1Pipeline.saturation - INFO - Detected 2 A/D floor pixels
2024-03-13 20:35:39,941 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:35:40,090 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:40,091 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:40,091 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:35:40,096 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:35:40,230 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:40,232 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:40,255 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:35:40,455 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:35:40,603 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:40,604 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:35:40,662 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:35:40,662 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:35:40,663 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:35:40,663 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:35:40,664 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:35:40,664 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:35:40,665 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:35:40,665 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:35:44,859 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:35:45,007 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:45,009 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:35:45,032 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:35:45,088 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:45,088 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:45,092 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:35:45,659 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:35:45,810 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:45,811 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:35:45,812 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:35:45,816 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:35:45,953 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:45,955 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:35:45,978 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:35:46,154 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:35:46,154 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:35:46,455 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:35:46,604 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:46,605 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:35:46,661 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:35:47,089 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:35:47,243 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:35:47,245 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:35:47,256 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:35:47,256 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:35:47,269 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:35:47,312 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:35:47,489 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:36:23,103 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:36:23,637 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 8
2024-03-13 20:36:23,637 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.1477 sec
2024-03-13 20:36:23,725 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.468722
2024-03-13 20:36:23,733 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:36:23,884 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:36:23,886 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:36:23,920 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:36:23,920 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:36:23,983 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:36:23,983 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:37:26,877 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:37:26,878 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:37:41,900 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:37:42,049 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:37:42,050 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:42,100 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:37:42,100 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:37:42,107 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:37:42,251 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00014_nis_uncal.fits>,).
2024-03-13 20:37:42,252 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:42,301 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:37:42,301 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:37:42,308 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:37:42,464 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00014_nis_rateints.fits
2024-03-13 20:37:42,464 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:37:42,465 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:37:42,621 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00014_nis_rate.fits
2024-03-13 20:37:42,621 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:37:42,918 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:37:42,927 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:37:42,937 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:37:42,948 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:37:42,964 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:37:42,965 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:37:42,966 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:37:42,967 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:37:42,968 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:37:42,969 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:37:42,970 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:37:42,971 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:37:42,972 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:37:42,973 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:37:42,973 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:37:42,974 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:37:42,975 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:37:42,976 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:37:42,977 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:37:42,978 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:37:42,980 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:37:42,981 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:37:42,982 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:37:43,133 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00015_nis_uncal.fits',).
2024-03-13 20:37:43,142 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:37:43,440 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00015_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:37:43,443 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:37:43,444 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:37:43,444 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:37:43,445 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:37:43,445 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:37:43,446 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:37:43,446 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:37:43,447 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:37:43,447 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:37:43,448 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:37:43,449 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:37:43,916 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:43,917 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:44,012 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:37:44,013 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:37:44,017 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:37:44,171 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:44,172 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:44,195 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:37:44,407 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:37:44,556 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:44,557 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:37:44,580 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:37:44,621 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:44,622 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:44,626 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:46,337 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4781 saturated pixels
2024-03-13 20:37:46,356 - stpipe.Detector1Pipeline.saturation - INFO - Detected 1 A/D floor pixels
2024-03-13 20:37:46,367 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:37:46,516 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:46,517 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:46,518 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:37:46,522 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:37:46,657 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:46,658 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:46,682 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:37:46,835 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:37:46,981 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:46,983 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:37:47,040 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:37:47,040 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:37:47,041 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:37:47,041 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:37:47,041 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:37:47,042 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:37:47,042 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:37:47,042 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:37:51,223 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:37:51,374 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:51,375 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:37:51,398 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:37:51,453 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:51,454 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:51,458 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:37:52,001 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:37:52,152 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:52,153 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:37:52,154 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:37:52,158 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:37:52,297 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:52,298 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:37:52,322 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:37:52,521 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:37:52,522 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:37:52,780 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:37:52,928 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:52,929 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:37:52,985 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:37:53,403 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:37:53,554 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:37:53,556 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:37:53,567 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:37:53,567 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:37:53,580 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:37:53,621 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:37:53,796 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:38:29,915 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:38:30,541 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 6
2024-03-13 20:38:30,542 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.7447 sec
2024-03-13 20:38:30,628 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 37.061526
2024-03-13 20:38:30,636 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:38:30,785 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:38:30,786 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:38:30,820 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:38:30,820 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:38:30,883 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:38:30,884 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:39:34,673 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:39:34,673 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:39:50,173 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:39:50,320 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:39:50,321 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:50,366 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:39:50,367 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:39:50,374 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:39:50,513 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00015_nis_uncal.fits>,).
2024-03-13 20:39:50,515 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:50,564 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:39:50,565 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:39:50,571 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:39:50,726 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00015_nis_rateints.fits
2024-03-13 20:39:50,727 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:39:50,728 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:39:50,886 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00015_nis_rate.fits
2024-03-13 20:39:50,886 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:39:51,179 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:39:51,188 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:39:51,198 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:39:51,210 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:39:51,227 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:39:51,228 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:39:51,229 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:39:51,230 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:39:51,231 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:39:51,232 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:39:51,233 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:39:51,234 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:39:51,236 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:39:51,236 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:39:51,237 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:39:51,238 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:39:51,239 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:39:51,240 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:39:51,241 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:39:51,242 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:39:51,244 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:39:51,245 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:39:51,246 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:39:51,392 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00016_nis_uncal.fits',).
2024-03-13 20:39:51,402 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:39:51,696 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00016_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:39:51,700 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:39:51,700 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:39:51,701 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:39:51,702 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:39:51,702 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:39:51,703 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:39:51,703 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:39:51,703 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:39:51,704 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:39:51,704 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:39:51,706 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:39:52,175 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:52,177 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:52,273 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:39:52,273 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:39:52,278 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:39:52,428 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:52,429 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:52,453 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:39:52,663 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:39:52,813 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:52,814 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:39:52,838 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:39:52,881 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:39:52,881 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:39:52,885 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:39:54,620 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4883 saturated pixels
2024-03-13 20:39:54,639 - stpipe.Detector1Pipeline.saturation - INFO - Detected 2 A/D floor pixels
2024-03-13 20:39:54,650 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:39:54,799 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:54,800 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:54,801 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:39:54,804 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:39:54,947 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:54,948 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:54,971 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:39:55,182 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:39:55,328 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:55,330 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:39:55,404 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:39:55,405 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:39:55,405 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:39:55,406 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:39:55,406 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:39:55,407 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:39:55,407 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:39:55,408 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:39:59,569 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:39:59,718 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:39:59,719 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:39:59,742 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:39:59,799 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:39:59,800 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:39:59,803 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:40:00,400 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:40:00,550 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:40:00,551 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:40:00,551 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:40:00,555 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:40:00,693 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:40:00,694 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:40:00,717 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:40:00,893 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:40:00,893 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:40:01,233 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:40:01,381 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:40:01,382 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:40:01,498 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:40:01,920 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:40:02,078 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:40:02,080 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:40:02,091 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:40:02,091 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:40:02,104 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:40:02,146 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:40:02,323 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:40:38,045 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:40:38,459 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 7
2024-03-13 20:40:38,459 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 36.1363 sec
2024-03-13 20:40:38,548 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.456580
2024-03-13 20:40:38,556 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:40:38,703 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:40:38,705 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:40:38,738 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:40:38,739 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:40:38,806 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:40:38,806 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:41:42,233 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:41:42,234 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:41:57,144 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:41:57,291 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:41:57,292 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:41:57,338 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:41:57,339 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:41:57,346 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:41:57,486 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00016_nis_uncal.fits>,).
2024-03-13 20:41:57,487 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:41:57,537 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:41:57,537 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:41:57,544 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:41:57,700 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00016_nis_rateints.fits
2024-03-13 20:41:57,701 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:41:57,702 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:41:57,859 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00016_nis_rate.fits
2024-03-13 20:41:57,860 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
2024-03-13 20:41:58,154 - CRDS - ERROR - Error determining best reference for 'pars-emicorrstep' = Unknown reference type 'pars-emicorrstep'
2024-03-13 20:41:58,163 - stpipe - INFO - PARS-CHARGEMIGRATIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-chargemigrationstep_0018.asdf
2024-03-13 20:41:58,173 - stpipe - INFO - PARS-JUMPSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-jumpstep_0087.asdf
2024-03-13 20:41:58,184 - stpipe - INFO - PARS-DETECTOR1PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-detector1pipeline_0001.asdf
2024-03-13 20:41:58,201 - stpipe.Detector1Pipeline - INFO - Detector1Pipeline instance created.
2024-03-13 20:41:58,201 - stpipe.Detector1Pipeline.group_scale - INFO - GroupScaleStep instance created.
2024-03-13 20:41:58,202 - stpipe.Detector1Pipeline.dq_init - INFO - DQInitStep instance created.
2024-03-13 20:41:58,203 - stpipe.Detector1Pipeline.emicorr - INFO - EmiCorrStep instance created.
2024-03-13 20:41:58,204 - stpipe.Detector1Pipeline.saturation - INFO - SaturationStep instance created.
2024-03-13 20:41:58,205 - stpipe.Detector1Pipeline.ipc - INFO - IPCStep instance created.
2024-03-13 20:41:58,206 - stpipe.Detector1Pipeline.superbias - INFO - SuperBiasStep instance created.
2024-03-13 20:41:58,207 - stpipe.Detector1Pipeline.refpix - INFO - RefPixStep instance created.
2024-03-13 20:41:58,208 - stpipe.Detector1Pipeline.rscd - INFO - RscdStep instance created.
2024-03-13 20:41:58,209 - stpipe.Detector1Pipeline.firstframe - INFO - FirstFrameStep instance created.
2024-03-13 20:41:58,210 - stpipe.Detector1Pipeline.lastframe - INFO - LastFrameStep instance created.
2024-03-13 20:41:58,211 - stpipe.Detector1Pipeline.linearity - INFO - LinearityStep instance created.
2024-03-13 20:41:58,212 - stpipe.Detector1Pipeline.dark_current - INFO - DarkCurrentStep instance created.
2024-03-13 20:41:58,213 - stpipe.Detector1Pipeline.reset - INFO - ResetStep instance created.
2024-03-13 20:41:58,214 - stpipe.Detector1Pipeline.persistence - INFO - PersistenceStep instance created.
2024-03-13 20:41:58,215 - stpipe.Detector1Pipeline.charge_migration - INFO - ChargeMigrationStep instance created.
2024-03-13 20:41:58,216 - stpipe.Detector1Pipeline.jump - INFO - JumpStep instance created.
2024-03-13 20:41:58,218 - stpipe.Detector1Pipeline.ramp_fit - INFO - RampFitStep instance created.
2024-03-13 20:41:58,219 - stpipe.Detector1Pipeline.gain_scale - INFO - GainScaleStep instance created.
2024-03-13 20:41:58,367 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline running with args ('1475_f150w/jw01475006001_02201_00017_nis_uncal.fits',).
2024-03-13 20:41:58,377 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_calibrated_ramp': False, 'steps': {'group_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dq_init': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'emicorr': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_intermediate_results': False, 'user_supplied_reffile': None, 'nints_to_phase': None, 'nbins': None, 'scale_reference': True}, 'saturation': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'n_pix_grow_sat': 1}, 'ipc': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'superbias': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'refpix': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}, 'rscd': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'type': 'baseline'}, 'firstframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'lastframe': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'linearity': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'dark_current': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'dark_output': None}, 'reset': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}, 'persistence': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}, 'charge_migration': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'signal_threshold': 21864.0}, 'jump': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}, 'ramp_fit': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}, 'gain_scale': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': ''}}}
2024-03-13 20:41:58,669 - stpipe.Detector1Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00017_nis_uncal.fits' reftypes = ['dark', 'gain', 'linearity', 'mask', 'readnoise', 'refpix', 'reset', 'rscd', 'saturation', 'superbias']
2024-03-13 20:41:58,672 - stpipe.Detector1Pipeline - INFO - Prefetch for DARK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits'.
2024-03-13 20:41:58,673 - stpipe.Detector1Pipeline - INFO - Prefetch for GAIN reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits'.
2024-03-13 20:41:58,673 - stpipe.Detector1Pipeline - INFO - Prefetch for LINEARITY reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits'.
2024-03-13 20:41:58,674 - stpipe.Detector1Pipeline - INFO - Prefetch for MASK reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits'.
2024-03-13 20:41:58,674 - stpipe.Detector1Pipeline - INFO - Prefetch for READNOISE reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits'.
2024-03-13 20:41:58,675 - stpipe.Detector1Pipeline - INFO - Prefetch for REFPIX reference file is 'N/A'.
2024-03-13 20:41:58,675 - stpipe.Detector1Pipeline - INFO - Prefetch for RESET reference file is 'N/A'.
2024-03-13 20:41:58,676 - stpipe.Detector1Pipeline - INFO - Prefetch for RSCD reference file is 'N/A'.
2024-03-13 20:41:58,676 - stpipe.Detector1Pipeline - INFO - Prefetch for SATURATION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits'.
2024-03-13 20:41:58,677 - stpipe.Detector1Pipeline - INFO - Prefetch for SUPERBIAS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits'.
2024-03-13 20:41:58,678 - stpipe.Detector1Pipeline - INFO - Starting calwebb_detector1 ...
2024-03-13 20:41:59,145 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:41:59,146 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:41:59,274 - stpipe.Detector1Pipeline.group_scale - INFO - NFRAMES and FRMDIVSR are equal; correction not needed
2024-03-13 20:41:59,275 - stpipe.Detector1Pipeline.group_scale - INFO - Step will be skipped
2024-03-13 20:41:59,279 - stpipe.Detector1Pipeline.group_scale - INFO - Step group_scale done
2024-03-13 20:41:59,428 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:41:59,429 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:41:59,452 - stpipe.Detector1Pipeline.dq_init - INFO - Using MASK reference file crds_cache/references/jwst/niriss/jwst_niriss_mask_0017.fits
2024-03-13 20:41:59,645 - stpipe.Detector1Pipeline.dq_init - INFO - Step dq_init done
2024-03-13 20:41:59,794 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:41:59,795 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'n_pix_grow_sat': 1}
2024-03-13 20:41:59,818 - stpipe.Detector1Pipeline.saturation - INFO - Using SATURATION reference file crds_cache/references/jwst/niriss/jwst_niriss_saturation_0015.fits
2024-03-13 20:41:59,860 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:41:59,861 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:41:59,864 - stpipe.Detector1Pipeline.saturation - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:42:01,535 - stpipe.Detector1Pipeline.saturation - INFO - Detected 4739 saturated pixels
2024-03-13 20:42:01,554 - stpipe.Detector1Pipeline.saturation - INFO - Detected 2 A/D floor pixels
2024-03-13 20:42:01,565 - stpipe.Detector1Pipeline.saturation - INFO - Step saturation done
2024-03-13 20:42:01,715 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:01,716 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:42:01,717 - stpipe.Detector1Pipeline.ipc - INFO - Step skipped.
2024-03-13 20:42:01,721 - stpipe.Detector1Pipeline.ipc - INFO - Step ipc done
2024-03-13 20:42:01,858 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:01,859 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:42:01,882 - stpipe.Detector1Pipeline.superbias - INFO - Using SUPERBIAS reference file crds_cache/references/jwst/niriss/jwst_niriss_superbias_0183.fits
2024-03-13 20:42:02,057 - stpipe.Detector1Pipeline.superbias - INFO - Step superbias done
2024-03-13 20:42:02,205 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:02,207 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'odd_even_columns': True, 'use_side_ref_pixels': True, 'side_smoothing_length': 11, 'side_gain': 1.0, 'odd_even_rows': True, 'ovr_corr_mitigation_ftr': 3.0}
2024-03-13 20:42:02,279 - stpipe.Detector1Pipeline.refpix - INFO - NIR full frame data
2024-03-13 20:42:02,280 - stpipe.Detector1Pipeline.refpix - INFO - The following parameters are valid for this mode:
2024-03-13 20:42:02,280 - stpipe.Detector1Pipeline.refpix - INFO - use_side_ref_pixels = True
2024-03-13 20:42:02,280 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_columns = True
2024-03-13 20:42:02,281 - stpipe.Detector1Pipeline.refpix - INFO - side_smoothing_length = 11
2024-03-13 20:42:02,281 - stpipe.Detector1Pipeline.refpix - INFO - side_gain = 1.0
2024-03-13 20:42:02,281 - stpipe.Detector1Pipeline.refpix - INFO - The following parameter is not applicable and is ignored:
2024-03-13 20:42:02,282 - stpipe.Detector1Pipeline.refpix - INFO - odd_even_rows = False
2024-03-13 20:42:06,456 - stpipe.Detector1Pipeline.refpix - INFO - Step refpix done
2024-03-13 20:42:06,609 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:06,610 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:42:06,634 - stpipe.Detector1Pipeline.linearity - INFO - Using Linearity reference file crds_cache/references/jwst/niriss/jwst_niriss_linearity_0017.fits
2024-03-13 20:42:06,690 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWILLUM does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:42:06,690 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword LOWRESP does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:42:06,694 - stpipe.Detector1Pipeline.linearity - WARNING - Keyword UNCERTAIN does not correspond to an existing DQ mnemonic, so will be ignored
2024-03-13 20:42:07,265 - stpipe.Detector1Pipeline.linearity - INFO - Step linearity done
2024-03-13 20:42:07,414 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:07,415 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'input_trapsfilled': '', 'flag_pers_cutoff': 40.0, 'save_persistence': False, 'save_trapsfilled': True}
2024-03-13 20:42:07,416 - stpipe.Detector1Pipeline.persistence - INFO - Step skipped.
2024-03-13 20:42:07,420 - stpipe.Detector1Pipeline.persistence - INFO - Step persistence done
2024-03-13 20:42:07,555 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:07,556 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'dark_output': None}
2024-03-13 20:42:07,579 - stpipe.Detector1Pipeline.dark_current - INFO - Using DARK reference file crds_cache/references/jwst/niriss/jwst_niriss_dark_0169.fits
2024-03-13 20:42:07,788 - stpipe.Detector1Pipeline.dark_current - INFO - Science data nints=1, ngroups=16, nframes=4, groupgap=0
2024-03-13 20:42:07,788 - stpipe.Detector1Pipeline.dark_current - INFO - Dark data nints=1, ngroups=30, nframes=4, groupgap=0
2024-03-13 20:42:08,060 - stpipe.Detector1Pipeline.dark_current - INFO - Step dark_current done
2024-03-13 20:42:08,211 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:08,213 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'signal_threshold': 21864.0}
2024-03-13 20:42:08,296 - stpipe.Detector1Pipeline.charge_migration - INFO - Using signal_threshold: 21864.00
2024-03-13 20:42:08,695 - stpipe.Detector1Pipeline.charge_migration - INFO - Step charge_migration done
2024-03-13 20:42:08,843 - stpipe.Detector1Pipeline.jump - INFO - Step jump running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:08,845 - stpipe.Detector1Pipeline.jump - INFO - Step jump parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'rejection_threshold': 8.0, 'three_group_rejection_threshold': 6.0, 'four_group_rejection_threshold': 5.0, 'maximum_cores': '1', 'flag_4_neighbors': False, 'max_jump_to_flag_neighbors': 200.0, 'min_jump_to_flag_neighbors': 10.0, 'after_jump_flag_dn1': 1000, 'after_jump_flag_time1': 90, 'after_jump_flag_dn2': 0, 'after_jump_flag_time2': 0, 'expand_large_events': True, 'min_sat_area': 5, 'min_jump_area': 15.0, 'expand_factor': 1.75, 'use_ellipses': False, 'sat_required_snowball': True, 'min_sat_radius_extend': 5.0, 'sat_expand': 0, 'edge_size': 20, 'find_showers': False, 'extend_snr_threshold': 1.2, 'extend_min_area': 90, 'extend_inner_radius': 1.0, 'extend_outer_radius': 2.6, 'extend_ellipse_expand_ratio': 1.1, 'time_masked_after_shower': 15.0, 'max_extended_radius': 100, 'minimum_groups': 3, 'minimum_sigclip_groups': 100, 'only_use_ints': True}
2024-03-13 20:42:08,857 - stpipe.Detector1Pipeline.jump - INFO - CR rejection threshold = 8 sigma
2024-03-13 20:42:08,857 - stpipe.Detector1Pipeline.jump - INFO - Maximum cores to use = 1
2024-03-13 20:42:08,869 - stpipe.Detector1Pipeline.jump - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:42:08,912 - stpipe.Detector1Pipeline.jump - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:42:09,157 - stpipe.Detector1Pipeline.jump - INFO - Executing two-point difference method
2024-03-13 20:42:44,405 - stpipe.Detector1Pipeline.jump - INFO - Flagging large Snowballs
2024-03-13 20:42:45,060 - stpipe.Detector1Pipeline.jump - INFO - Total snowballs = 5
2024-03-13 20:42:45,060 - stpipe.Detector1Pipeline.jump - INFO - Total elapsed time = 35.9023 sec
2024-03-13 20:42:45,152 - stpipe.Detector1Pipeline.jump - INFO - The execution time in seconds: 36.295650
2024-03-13 20:42:45,161 - stpipe.Detector1Pipeline.jump - INFO - Step jump done
2024-03-13 20:42:45,338 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit running with args (<RampModel(1, 16, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:42:45,340 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'detector1/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '1475_f150w', 'int_name': '', 'save_opt': False, 'opt_name': '', 'suppress_one_group': True, 'maximum_cores': '1'}
2024-03-13 20:42:45,374 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using READNOISE reference file: crds_cache/references/jwst/niriss/jwst_niriss_readnoise_0005.fits
2024-03-13 20:42:45,374 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using GAIN reference file: crds_cache/references/jwst/niriss/jwst_niriss_gain_0006.fits
2024-03-13 20:42:45,440 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using algorithm = ols
2024-03-13 20:42:45,441 - stpipe.Detector1Pipeline.ramp_fit - INFO - Using weighting = optimal
2024-03-13 20:43:50,362 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of groups per integration: 16
2024-03-13 20:43:50,363 - stpipe.Detector1Pipeline.ramp_fit - INFO - Number of integrations: 1
2024-03-13 20:44:06,574 - stpipe.Detector1Pipeline.ramp_fit - INFO - Step ramp_fit done
2024-03-13 20:44:06,724 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:44:06,725 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scale', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:44:06,771 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:44:06,771 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:44:06,778 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:44:06,921 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale running with args (<CubeModel(1, 2048, 2048) from jw01475006001_02201_00017_nis_uncal.fits>,).
2024-03-13 20:44:06,922 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'gain_scaleints', 'search_output_file': True, 'input_dir': '1475_f150w'}
2024-03-13 20:44:06,971 - stpipe.Detector1Pipeline.gain_scale - INFO - GAINFACT not found in gain reference file
2024-03-13 20:44:06,972 - stpipe.Detector1Pipeline.gain_scale - INFO - Step will be skipped
2024-03-13 20:44:06,979 - stpipe.Detector1Pipeline.gain_scale - INFO - Step gain_scale done
2024-03-13 20:44:07,136 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00017_nis_rateints.fits
2024-03-13 20:44:07,136 - stpipe.Detector1Pipeline - INFO - ... ending calwebb_detector1
2024-03-13 20:44:07,137 - stpipe.Detector1Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:07,296 - stpipe.Detector1Pipeline - INFO - Saved model in detector1/jw01475006001_02201_00017_nis_rate.fits
2024-03-13 20:44:07,297 - stpipe.Detector1Pipeline - INFO - Step Detector1Pipeline done
Identify *_rate.fits files#
rate_files = sorted(glob.glob(os.path.join(det1_dir, '*_rate.fits')))
Verify which pipeline steps were run and which calibration reference files were applied#
The header contains information about which calibration steps were completed and skipped and which reference files were used to process the data.
# Read in file as datamodel
rate_f = datamodels.open(rate_files[0])
rate_f.meta.cal_step.instance
{'charge_migration': 'COMPLETE',
'dark_sub': 'COMPLETE',
'dq_init': 'COMPLETE',
'gain_scale': 'SKIPPED',
'group_scale': 'SKIPPED',
'ipc': 'SKIPPED',
'jump': 'COMPLETE',
'linearity': 'COMPLETE',
'persistence': 'SKIPPED',
'ramp_fit': 'COMPLETE',
'refpix': 'COMPLETE',
'saturation': 'COMPLETE',
'superbias': 'COMPLETE'}
Check which reference files were used to calibrate the dataset:
rate_f.meta.ref_file.instance
{'crds': {'context_used': 'jwst_1214.pmap', 'sw_version': '11.17.19'},
'dark': {'name': 'crds://jwst_niriss_dark_0169.fits'},
'gain': {'name': 'crds://jwst_niriss_gain_0006.fits'},
'linearity': {'name': 'crds://jwst_niriss_linearity_0017.fits'},
'mask': {'name': 'crds://jwst_niriss_mask_0017.fits'},
'readnoise': {'name': 'crds://jwst_niriss_readnoise_0005.fits'},
'saturation': {'name': 'crds://jwst_niriss_saturation_0015.fits'},
'superbias': {'name': 'crds://jwst_niriss_superbias_0183.fits'}}
Display rate image#
Visualize a countrate image, using the dataset from the first dither position as an example.
# Create an Imviz instance and set up default viewer
imviz_rate = Imviz()
viewer_rate = imviz_rate.default_viewer
# Read in the science array for our visualization dataset:
rate_science = rate_f.data
# Load the dataset into Imviz
imviz_rate.load_data(rate_science)
# Visualize the dataset:
imviz_rate.show()
viewer_rate.stretch = 'sqrt'
viewer_rate.set_colormap('Viridis')
viewer_rate.cuts = '95%'
3. Stage 2 Processing #
In the Image2 stage of the pipeline, calibrated unrectified data products are created (*_cal.fits or *_calints.fits files, depending on whether the input files are *_rate.fits or *_rateints.fits).
In this pipeline processing stage, the world coordinate system (WCS) is assigned, the data are flat fielded, and a photometric calibration is applied to convert from units of countrate (ADU/s) to surface brightness (MJy/sr).
By default, the background subtraction step and the resampling step are turned off for NIRISS at this stage of the pipeline. The background subtraction is turned off since there is no background template for the imaging mode and the local background is removed during the background correction for photometric measurements around individual sources. The resampling step occurs during the Image3 stage by default. While the resampling step can be turned on during the Image2 stage to, e.g., generate a source catalog for each image, the data quality from the Image3 stage will be better since the bad pixels, which adversely affect both the centroids and photometry in individual images, will be mostly removed.
# Define directory to save output from Image2
image2_dir = 'image2/'
# Create directory if it does not exist
if not os.path.isdir(image2_dir):
os.mkdir(image2_dir)
# Run Image2 stage of pipeline, specifying:
# output directory to save *_cal.fits files
# save_results flag set to True so the rate files are saved
for rate in rate_files:
cal_result = Image2Pipeline.call(rate,
output_dir=image2_dir,
save_results=True)
2024-03-13 20:44:08,240 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:08,253 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:08,254 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:08,255 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:08,256 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:08,257 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:08,258 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:08,418 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00001_nis_rate.fits',).
2024-03-13 20:44:08,422 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:08,478 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00001_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:08,482 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:08,483 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:08,483 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:08,483 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:08,484 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:08,484 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:08,485 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:08,485 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:08,486 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:08,487 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:08,487 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:08,488 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:08,488 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:08,489 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:08,489 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:08,489 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:08,490 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:08,491 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:08,491 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:08,492 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:08,492 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:08,493 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:08,493 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00001_nis
2024-03-13 20:44:08,494 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00001_nis_rate.fits ...
2024-03-13 20:44:08,708 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00001_nis_rate.fits>,).
2024-03-13 20:44:08,709 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:08,896 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:08,963 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.741854239 -26.792479051 303.782502890 -26.783393014 303.772199160 -26.747414924 303.731588611 -26.756482660
2024-03-13 20:44:08,964 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.741854239 -26.792479051 303.782502890 -26.783393014 303.772199160 -26.747414924 303.731588611 -26.756482660
2024-03-13 20:44:08,964 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:09,031 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:09,192 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00001_nis_rate.fits>,).
2024-03-13 20:44:09,193 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:09,300 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:09,301 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:09,301 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:09,302 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:09,443 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:09,605 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00001_nis_rate.fits>,).
2024-03-13 20:44:09,606 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:09,629 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:09,630 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:09,665 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:09,665 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:09,666 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:09,666 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:09,667 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:09,727 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:09,730 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:09,759 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:09,917 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00001_nis_rate.fits>,).
2024-03-13 20:44:09,918 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:09,919 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:09,922 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:09,923 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00001_nis
2024-03-13 20:44:09,924 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:09,925 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:10,205 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00001_nis_cal.fits
2024-03-13 20:44:10,205 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:10,260 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:10,273 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:10,274 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:10,276 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:10,277 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:10,278 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:10,280 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:10,444 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00002_nis_rate.fits',).
2024-03-13 20:44:10,448 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:10,498 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00002_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:10,502 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:10,502 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:10,503 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:10,503 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:10,504 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:10,504 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:10,505 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:10,505 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:10,506 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:10,507 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:10,507 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:10,507 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:10,508 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:10,508 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:10,508 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:10,509 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:10,509 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:10,510 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:10,511 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:10,512 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:10,512 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:10,513 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:10,514 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00002_nis
2024-03-13 20:44:10,514 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00002_nis_rate.fits ...
2024-03-13 20:44:10,727 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00002_nis_rate.fits>,).
2024-03-13 20:44:10,729 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:10,906 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:10,972 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.738214137 -26.798033307 303.778865034 -26.788948185 303.768561815 -26.752969863 303.727949025 -26.762036684
2024-03-13 20:44:10,972 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.738214137 -26.798033307 303.778865034 -26.788948185 303.768561815 -26.752969863 303.727949025 -26.762036684
2024-03-13 20:44:10,973 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:11,030 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:11,188 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00002_nis_rate.fits>,).
2024-03-13 20:44:11,189 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:11,293 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:11,294 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:11,294 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:11,294 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:11,424 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:11,584 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00002_nis_rate.fits>,).
2024-03-13 20:44:11,586 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:11,609 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:11,609 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:11,639 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:11,639 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:11,640 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:11,640 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:11,641 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:11,698 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:11,701 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:11,730 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:11,890 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00002_nis_rate.fits>,).
2024-03-13 20:44:11,891 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:11,892 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:11,896 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:11,897 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00002_nis
2024-03-13 20:44:11,899 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:11,899 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:12,168 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00002_nis_cal.fits
2024-03-13 20:44:12,169 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:12,223 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:12,236 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:12,237 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:12,238 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:12,239 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:12,240 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:12,241 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:12,406 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00003_nis_rate.fits',).
2024-03-13 20:44:12,409 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:12,466 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00003_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:12,469 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:12,470 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:12,470 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:12,470 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:12,471 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:12,471 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:12,472 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:12,472 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:12,473 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:12,474 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:12,474 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:12,475 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:12,475 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:12,476 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:12,476 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:12,477 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:12,477 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:12,477 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:12,478 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:12,478 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:12,479 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:12,480 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:12,480 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00003_nis
2024-03-13 20:44:12,481 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00003_nis_rate.fits ...
2024-03-13 20:44:12,697 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00003_nis_rate.fits>,).
2024-03-13 20:44:12,699 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:12,878 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:12,939 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.748076235 -26.795728135 303.788725488 -26.786640096 303.778419241 -26.750662514 303.737808091 -26.759732249
2024-03-13 20:44:12,940 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.748076235 -26.795728135 303.788725488 -26.786640096 303.778419241 -26.750662514 303.737808091 -26.759732249
2024-03-13 20:44:12,940 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:12,999 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:13,161 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00003_nis_rate.fits>,).
2024-03-13 20:44:13,163 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:13,267 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:13,268 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:13,268 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:13,269 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:13,403 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:13,566 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00003_nis_rate.fits>,).
2024-03-13 20:44:13,567 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:13,591 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:13,592 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:13,632 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:13,633 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:13,633 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:13,634 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:13,634 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:13,692 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:13,694 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:13,724 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:13,886 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00003_nis_rate.fits>,).
2024-03-13 20:44:13,888 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:13,889 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:13,893 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:13,893 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00003_nis
2024-03-13 20:44:13,895 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:13,896 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:14,162 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00003_nis_cal.fits
2024-03-13 20:44:14,162 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:14,216 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:14,229 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:14,230 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:14,231 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:14,232 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:14,233 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:14,234 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:14,398 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00004_nis_rate.fits',).
2024-03-13 20:44:14,402 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:14,452 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00004_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:14,456 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:14,456 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:14,457 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:14,457 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:14,458 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:14,458 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:14,459 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:14,459 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:14,460 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:14,460 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:14,461 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:14,461 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:14,462 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:14,462 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:14,463 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:14,463 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:14,464 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:14,464 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:14,465 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:14,465 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:14,467 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:14,468 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:14,469 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00004_nis
2024-03-13 20:44:14,469 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00004_nis_rate.fits ...
2024-03-13 20:44:14,682 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00004_nis_rate.fits>,).
2024-03-13 20:44:14,683 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:14,862 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:14,922 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.745493505 -26.786924996 303.786139823 -26.777837735 303.775835240 -26.741859955 303.735227018 -26.750928915
2024-03-13 20:44:14,923 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.745493505 -26.786924996 303.786139823 -26.777837735 303.775835240 -26.741859955 303.735227018 -26.750928915
2024-03-13 20:44:14,923 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:14,990 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:15,153 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00004_nis_rate.fits>,).
2024-03-13 20:44:15,154 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:15,259 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:15,260 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:15,260 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:15,261 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:15,387 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:15,563 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00004_nis_rate.fits>,).
2024-03-13 20:44:15,564 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:15,587 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:15,588 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:15,623 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:15,624 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:15,624 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:15,624 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:15,625 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:15,681 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:15,684 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:15,714 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:15,877 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00004_nis_rate.fits>,).
2024-03-13 20:44:15,879 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:15,879 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:15,883 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:15,883 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00004_nis
2024-03-13 20:44:15,885 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:15,886 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:16,153 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00004_nis_cal.fits
2024-03-13 20:44:16,154 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:16,208 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:16,220 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:16,221 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:16,223 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:16,224 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:16,225 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:16,226 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:16,388 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00005_nis_rate.fits',).
2024-03-13 20:44:16,392 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:16,443 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00005_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:16,446 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:16,447 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:16,447 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:16,448 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:16,448 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:16,449 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:16,449 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:16,450 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:16,450 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:16,451 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:16,452 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:16,452 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:16,453 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:16,453 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:16,454 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:16,454 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:16,454 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:16,456 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:16,456 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:16,456 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:16,457 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:16,458 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:16,458 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00005_nis
2024-03-13 20:44:16,458 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00005_nis_rate.fits ...
2024-03-13 20:44:16,674 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00005_nis_rate.fits>,).
2024-03-13 20:44:16,676 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:16,855 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:16,915 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.735631928 -26.789230123 303.776279861 -26.780145676 303.765978192 -26.744167183 303.725368360 -26.753233330
2024-03-13 20:44:16,916 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.735631928 -26.789230123 303.776279861 -26.780145676 303.765978192 -26.744167183 303.725368360 -26.753233330
2024-03-13 20:44:16,916 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:16,981 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:17,143 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00005_nis_rate.fits>,).
2024-03-13 20:44:17,144 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:17,249 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:17,249 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:17,250 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:17,250 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:17,385 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:17,562 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00005_nis_rate.fits>,).
2024-03-13 20:44:17,564 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:17,588 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:17,589 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:17,626 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:17,627 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:17,627 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:17,628 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:17,628 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:17,686 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:17,689 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:17,719 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:17,907 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00005_nis_rate.fits>,).
2024-03-13 20:44:17,909 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:17,909 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:17,913 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:17,914 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00005_nis
2024-03-13 20:44:17,915 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:17,916 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:18,184 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00005_nis_cal.fits
2024-03-13 20:44:18,185 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:18,240 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:18,253 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:18,254 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:18,256 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:18,257 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:18,258 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:18,260 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:18,427 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00006_nis_rate.fits',).
2024-03-13 20:44:18,431 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:18,482 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00006_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:18,485 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:18,486 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:18,486 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:18,486 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:18,487 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:18,487 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:18,488 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:18,488 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:18,488 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:18,489 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:18,489 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:18,490 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:18,490 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:18,491 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:18,491 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:18,491 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:18,492 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:18,492 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:18,493 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:18,493 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:18,493 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:18,494 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:18,495 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00006_nis
2024-03-13 20:44:18,495 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00006_nis_rate.fits ...
2024-03-13 20:44:18,715 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00006_nis_rate.fits>,).
2024-03-13 20:44:18,717 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:18,894 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:18,956 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.736922794 -26.793631848 303.777572181 -26.784546967 303.767269630 -26.748568584 303.726658346 -26.757635166
2024-03-13 20:44:18,956 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.736922794 -26.793631848 303.777572181 -26.784546967 303.767269630 -26.748568584 303.726658346 -26.757635166
2024-03-13 20:44:18,957 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:19,020 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:19,185 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00006_nis_rate.fits>,).
2024-03-13 20:44:19,187 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:19,291 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:19,291 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:19,292 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:19,292 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:19,420 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:19,592 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00006_nis_rate.fits>,).
2024-03-13 20:44:19,593 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:19,616 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:19,617 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:19,657 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:19,657 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:19,658 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:19,658 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:19,658 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:19,716 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:19,719 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:19,748 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:19,913 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00006_nis_rate.fits>,).
2024-03-13 20:44:19,914 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:19,915 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:19,918 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:19,919 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00006_nis
2024-03-13 20:44:19,920 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:19,922 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:20,186 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00006_nis_cal.fits
2024-03-13 20:44:20,187 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:20,241 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:20,255 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:20,256 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:20,257 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:20,258 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:20,259 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:20,261 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:20,423 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00007_nis_rate.fits',).
2024-03-13 20:44:20,428 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:20,478 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00007_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:20,481 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:20,482 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:20,482 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:20,482 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:20,483 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:20,483 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:20,484 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:20,484 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:20,486 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:20,486 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:20,487 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:20,487 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:20,488 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:20,488 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:20,488 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:20,489 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:20,489 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:20,490 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:20,490 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:20,491 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:20,491 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:20,492 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:20,492 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00007_nis
2024-03-13 20:44:20,493 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00007_nis_rate.fits ...
2024-03-13 20:44:20,724 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00007_nis_rate.fits>,).
2024-03-13 20:44:20,726 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:20,905 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:20,970 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.743144738 -26.796881330 303.783794840 -26.787794847 303.773490215 -26.751816871 303.732878218 -26.760885052
2024-03-13 20:44:20,970 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.743144738 -26.796881330 303.783794840 -26.787794847 303.773490215 -26.751816871 303.732878218 -26.760885052
2024-03-13 20:44:20,971 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:21,030 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:21,217 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00007_nis_rate.fits>,).
2024-03-13 20:44:21,218 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:21,325 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:21,325 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:21,326 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:21,326 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:21,452 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:21,630 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00007_nis_rate.fits>,).
2024-03-13 20:44:21,631 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:21,656 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:21,657 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:21,695 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:21,696 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:21,696 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:21,697 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:21,697 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:21,756 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:21,759 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:21,790 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:21,982 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00007_nis_rate.fits>,).
2024-03-13 20:44:21,983 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:21,984 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:21,987 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:21,988 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00007_nis
2024-03-13 20:44:21,989 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:21,990 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:22,268 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00007_nis_cal.fits
2024-03-13 20:44:22,269 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:22,324 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:22,337 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:22,338 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:22,340 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:22,341 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:22,342 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:22,343 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:22,512 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00008_nis_rate.fits',).
2024-03-13 20:44:22,516 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:22,569 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00008_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:22,572 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:22,573 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:22,573 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:22,574 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:22,574 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:22,575 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:22,575 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:22,575 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:22,577 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:22,577 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:22,578 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:22,578 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:22,579 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:22,579 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:22,580 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:22,580 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:22,581 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:22,581 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:22,581 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:22,582 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:22,582 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:22,583 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:22,584 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00008_nis
2024-03-13 20:44:22,584 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00008_nis_rate.fits ...
2024-03-13 20:44:22,801 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00008_nis_rate.fits>,).
2024-03-13 20:44:22,803 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:22,981 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:23,040 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.746784872 -26.791326555 303.787432662 -26.782238924 303.777127267 -26.746261238 303.736517577 -26.755330567
2024-03-13 20:44:23,041 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.746784872 -26.791326555 303.787432662 -26.782238924 303.777127267 -26.746261238 303.736517577 -26.755330567
2024-03-13 20:44:23,041 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:23,099 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:23,276 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00008_nis_rate.fits>,).
2024-03-13 20:44:23,278 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:23,384 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:23,384 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:23,385 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:23,385 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:23,513 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:23,685 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00008_nis_rate.fits>,).
2024-03-13 20:44:23,686 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:23,709 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:23,710 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:23,745 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:23,746 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:23,746 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:23,747 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:23,747 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:23,804 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:23,806 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:23,837 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:24,002 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00008_nis_rate.fits>,).
2024-03-13 20:44:24,003 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:24,004 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:24,008 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:24,008 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00008_nis
2024-03-13 20:44:24,010 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:24,010 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:24,276 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00008_nis_cal.fits
2024-03-13 20:44:24,276 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:24,331 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:24,344 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:24,345 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:24,346 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:24,347 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:24,348 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:24,349 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:24,514 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00009_nis_rate.fits',).
2024-03-13 20:44:24,518 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:24,570 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00009_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:24,573 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:24,573 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:24,574 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:24,574 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:24,575 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:24,575 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:24,576 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:24,576 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:24,577 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:24,577 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:24,578 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:24,578 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:24,578 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:24,579 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:24,579 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:24,580 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:24,580 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:24,582 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:24,583 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:24,583 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:24,584 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:24,585 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:24,585 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00009_nis
2024-03-13 20:44:24,585 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00009_nis_rate.fits ...
2024-03-13 20:44:24,805 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00009_nis_rate.fits>,).
2024-03-13 20:44:24,807 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:24,985 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:25,056 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.740562612 -26.788077734 303.781209713 -26.778991797 303.770906496 -26.743013682 303.730297492 -26.752081318
2024-03-13 20:44:25,057 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.740562612 -26.788077734 303.781209713 -26.778991797 303.770906496 -26.743013682 303.730297492 -26.752081318
2024-03-13 20:44:25,057 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:25,115 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:25,280 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00009_nis_rate.fits>,).
2024-03-13 20:44:25,281 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:25,385 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:25,386 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:25,386 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:25,387 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:25,515 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:25,687 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00009_nis_rate.fits>,).
2024-03-13 20:44:25,688 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:25,712 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:25,712 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:25,746 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:25,747 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:25,747 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:25,748 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:25,748 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:25,805 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:25,807 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:25,836 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:26,001 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00009_nis_rate.fits>,).
2024-03-13 20:44:26,003 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:26,004 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:26,007 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:26,008 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00009_nis
2024-03-13 20:44:26,009 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:26,010 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:26,280 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00009_nis_cal.fits
2024-03-13 20:44:26,280 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:26,335 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:26,348 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:26,349 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:26,350 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:26,351 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:26,352 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:26,353 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:26,522 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00010_nis_rate.fits',).
2024-03-13 20:44:26,526 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:26,581 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00010_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:26,584 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:26,585 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:26,585 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:26,586 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:26,586 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:26,586 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:26,587 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:26,588 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:26,588 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:26,589 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:26,590 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:26,590 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:26,591 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:26,591 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:26,592 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:26,592 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:26,592 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:26,594 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:26,594 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:26,594 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:26,595 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:26,596 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:26,596 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00010_nis
2024-03-13 20:44:26,597 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00010_nis_rate.fits ...
2024-03-13 20:44:26,825 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00010_nis_rate.fits>,).
2024-03-13 20:44:26,826 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:27,008 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:27,071 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.738742913 -26.790854726 303.779391177 -26.781769388 303.769088372 -26.745791122 303.728478209 -26.754858159
2024-03-13 20:44:27,071 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.738742913 -26.790854726 303.779391177 -26.781769388 303.769088372 -26.745791122 303.728478209 -26.754858159
2024-03-13 20:44:27,072 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:27,129 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:27,294 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00010_nis_rate.fits>,).
2024-03-13 20:44:27,296 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:27,399 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:27,400 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:27,400 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:27,400 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:27,532 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:27,703 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00010_nis_rate.fits>,).
2024-03-13 20:44:27,705 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:27,728 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:27,729 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:27,760 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:27,761 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:27,761 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:27,762 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:27,762 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:27,820 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:27,822 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:27,852 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:28,015 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00010_nis_rate.fits>,).
2024-03-13 20:44:28,017 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:28,018 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:28,021 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:28,022 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00010_nis
2024-03-13 20:44:28,023 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:28,024 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:28,291 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00010_nis_cal.fits
2024-03-13 20:44:28,291 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:28,347 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:28,362 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:28,363 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:28,364 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:28,365 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:28,366 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:28,368 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:28,540 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00011_nis_rate.fits',).
2024-03-13 20:44:28,545 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:28,596 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00011_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:28,599 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:28,600 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:28,600 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:28,601 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:28,601 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:28,602 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:28,603 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:28,603 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:28,604 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:28,605 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:28,605 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:28,606 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:28,606 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:28,606 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:28,607 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:28,607 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:28,608 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:28,609 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:28,610 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:28,610 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:28,610 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:28,611 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:28,613 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00011_nis
2024-03-13 20:44:28,613 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00011_nis_rate.fits ...
2024-03-13 20:44:28,842 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00011_nis_rate.fits>,).
2024-03-13 20:44:28,844 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:29,021 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:29,086 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.740034198 -26.795256243 303.780683961 -26.786170628 303.770380447 -26.750192432 303.729768789 -26.759259746
2024-03-13 20:44:29,086 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.740034198 -26.795256243 303.780683961 -26.786170628 303.770380447 -26.750192432 303.729768789 -26.759259746
2024-03-13 20:44:29,087 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:29,146 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:29,319 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00011_nis_rate.fits>,).
2024-03-13 20:44:29,320 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:29,425 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:29,426 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:29,426 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:29,427 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:29,556 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:29,732 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00011_nis_rate.fits>,).
2024-03-13 20:44:29,734 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:29,758 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:29,758 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:29,793 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:29,794 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:29,794 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:29,795 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:29,795 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:29,853 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:29,856 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:29,885 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:30,056 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00011_nis_rate.fits>,).
2024-03-13 20:44:30,058 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:30,058 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:30,062 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:30,063 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00011_nis
2024-03-13 20:44:30,065 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:30,065 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:30,335 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00011_nis_cal.fits
2024-03-13 20:44:30,335 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:30,390 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:30,403 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:30,404 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:30,406 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:30,407 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:30,408 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:30,409 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:30,581 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00012_nis_rate.fits',).
2024-03-13 20:44:30,585 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:30,636 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00012_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:30,639 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:30,640 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:30,640 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:30,640 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:30,641 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:30,641 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:30,642 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:30,642 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:30,643 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:30,644 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:30,644 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:30,644 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:30,645 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:30,645 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:30,646 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:30,646 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:30,647 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:30,647 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:30,648 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:30,648 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:30,649 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:30,649 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:30,650 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00012_nis
2024-03-13 20:44:30,650 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00012_nis_rate.fits ...
2024-03-13 20:44:30,889 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00012_nis_rate.fits>,).
2024-03-13 20:44:30,891 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:31,070 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:31,143 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.744965132 -26.794103704 303.785614069 -26.785016615 303.775309024 -26.749038793 303.734698191 -26.758107579
2024-03-13 20:44:31,143 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.744965132 -26.794103704 303.785614069 -26.785016615 303.775309024 -26.749038793 303.734698191 -26.758107579
2024-03-13 20:44:31,144 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:31,208 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:31,394 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00012_nis_rate.fits>,).
2024-03-13 20:44:31,396 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:31,503 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:31,503 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:31,504 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:31,504 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:31,634 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:31,831 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00012_nis_rate.fits>,).
2024-03-13 20:44:31,832 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:31,856 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:31,857 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:31,893 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:31,894 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:31,894 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:31,895 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:31,895 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:31,953 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:31,956 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:31,986 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:32,184 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00012_nis_rate.fits>,).
2024-03-13 20:44:32,186 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:32,186 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:32,190 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:32,191 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00012_nis
2024-03-13 20:44:32,192 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:32,193 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:32,462 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00012_nis_cal.fits
2024-03-13 20:44:32,463 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:32,523 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:32,537 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:32,538 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:32,539 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:32,540 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:32,541 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:32,543 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:32,741 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00013_nis_rate.fits',).
2024-03-13 20:44:32,745 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:32,796 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00013_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:32,799 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:32,800 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:32,801 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:32,801 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:32,801 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:32,802 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:32,803 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:32,803 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:32,803 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:32,804 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:32,804 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:32,805 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:32,805 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:32,806 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:32,806 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:32,806 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:32,807 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:32,808 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:32,808 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:32,809 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:32,809 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:32,810 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:32,810 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00013_nis
2024-03-13 20:44:32,811 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00013_nis_rate.fits ...
2024-03-13 20:44:33,053 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00013_nis_rate.fits>,).
2024-03-13 20:44:33,054 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:33,235 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:33,305 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.743673743 -26.789702172 303.784321194 -26.780615409 303.774016911 -26.744637504 303.733407559 -26.753705966
2024-03-13 20:44:33,306 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.743673743 -26.789702172 303.784321194 -26.780615409 303.774016911 -26.744637504 303.733407559 -26.753705966
2024-03-13 20:44:33,306 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:33,365 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:33,555 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00013_nis_rate.fits>,).
2024-03-13 20:44:33,557 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:33,663 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:33,664 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:33,664 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:33,664 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:33,798 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:33,976 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00013_nis_rate.fits>,).
2024-03-13 20:44:33,978 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:34,002 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:34,002 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:34,034 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:34,034 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:34,034 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:34,035 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:34,035 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:34,093 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:34,096 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:34,125 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:34,323 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00013_nis_rate.fits>,).
2024-03-13 20:44:34,324 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:34,325 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:34,329 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:34,329 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00013_nis
2024-03-13 20:44:34,331 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:34,331 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:34,601 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00013_nis_cal.fits
2024-03-13 20:44:34,602 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:34,657 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:34,671 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:34,672 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:34,674 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:34,675 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:34,676 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:34,677 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:34,862 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00014_nis_rate.fits',).
2024-03-13 20:44:34,867 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:34,918 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00014_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:34,921 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:34,922 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:34,922 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:34,923 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:34,923 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:34,924 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:34,925 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:34,925 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:34,926 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:34,926 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:34,927 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:34,927 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:34,927 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:34,928 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:34,928 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:34,929 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:34,929 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:34,929 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:34,931 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:34,931 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:34,932 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:34,933 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:34,933 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00014_nis
2024-03-13 20:44:34,934 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00014_nis_rate.fits ...
2024-03-13 20:44:35,163 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00014_nis_rate.fits>,).
2024-03-13 20:44:35,164 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:35,345 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:35,410 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.741208296 -26.790278517 303.781856145 -26.781192440 303.771552571 -26.745214361 303.730942822 -26.754282137
2024-03-13 20:44:35,410 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.741208296 -26.790278517 303.781856145 -26.781192440 303.771552571 -26.745214361 303.730942822 -26.754282137
2024-03-13 20:44:35,411 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:35,469 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:35,635 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00014_nis_rate.fits>,).
2024-03-13 20:44:35,637 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:35,741 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:35,741 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:35,742 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:35,743 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:35,883 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:36,061 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00014_nis_rate.fits>,).
2024-03-13 20:44:36,062 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:36,086 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:36,087 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:36,117 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:36,118 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:36,118 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:36,119 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:36,120 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:36,177 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:36,180 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:36,210 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:36,383 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00014_nis_rate.fits>,).
2024-03-13 20:44:36,385 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:36,385 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:36,389 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:36,389 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00014_nis
2024-03-13 20:44:36,391 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:36,391 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:36,657 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00014_nis_cal.fits
2024-03-13 20:44:36,658 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:36,713 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:36,727 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:36,728 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:36,729 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:36,730 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:36,731 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:36,733 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:36,927 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00015_nis_rate.fits',).
2024-03-13 20:44:36,932 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:36,986 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00015_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:36,990 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:36,990 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:36,991 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:36,991 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:36,991 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:36,992 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:36,993 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:36,993 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:36,993 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:36,994 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:36,995 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:36,995 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:36,996 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:36,996 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:36,997 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:36,997 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:36,998 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:36,999 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:36,999 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:36,999 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:37,000 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:37,001 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:37,001 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00015_nis
2024-03-13 20:44:37,002 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00015_nis_rate.fits ...
2024-03-13 20:44:37,248 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00015_nis_rate.fits>,).
2024-03-13 20:44:37,249 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:37,438 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:37,504 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.739388537 -26.793055529 303.780037545 -26.783970036 303.769734367 -26.747991809 303.729123462 -26.757059002
2024-03-13 20:44:37,505 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.739388537 -26.793055529 303.780037545 -26.783970036 303.769734367 -26.747991809 303.729123462 -26.757059002
2024-03-13 20:44:37,506 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:37,566 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:37,768 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00015_nis_rate.fits>,).
2024-03-13 20:44:37,770 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:37,885 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:37,885 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:37,886 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:37,886 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:38,018 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:38,218 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00015_nis_rate.fits>,).
2024-03-13 20:44:38,219 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:38,243 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:38,244 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:38,281 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:38,282 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:38,282 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:38,283 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:38,283 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:38,342 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:38,345 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:38,376 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:38,577 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00015_nis_rate.fits>,).
2024-03-13 20:44:38,578 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:38,578 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:38,583 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:38,583 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00015_nis
2024-03-13 20:44:38,585 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:38,586 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:38,865 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00015_nis_cal.fits
2024-03-13 20:44:38,866 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:38,922 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:38,935 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:38,937 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:38,938 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:38,939 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:38,940 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:38,941 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:39,144 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00016_nis_rate.fits',).
2024-03-13 20:44:39,148 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:39,200 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00016_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:39,203 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:39,204 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:39,204 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:39,205 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:39,205 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:39,206 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:39,206 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:39,207 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:39,207 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:39,208 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:39,208 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:39,209 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:39,209 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:39,209 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:39,210 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:39,210 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:39,211 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:39,212 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:39,212 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:39,213 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:39,213 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:39,214 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:39,215 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00016_nis
2024-03-13 20:44:39,215 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00016_nis_rate.fits ...
2024-03-13 20:44:39,463 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00016_nis_rate.fits>,).
2024-03-13 20:44:39,465 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:39,650 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:39,715 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.742499665 -26.794680027 303.783149008 -26.785593654 303.772844705 -26.749615651 303.732233466 -26.758683722
2024-03-13 20:44:39,716 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.742499665 -26.794680027 303.783149008 -26.785593654 303.772844705 -26.749615651 303.732233466 -26.758683722
2024-03-13 20:44:39,717 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:39,776 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:39,976 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00016_nis_rate.fits>,).
2024-03-13 20:44:39,978 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:40,086 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:40,086 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:40,087 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:40,087 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:40,219 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:40,417 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00016_nis_rate.fits>,).
2024-03-13 20:44:40,418 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:40,443 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:40,444 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:40,481 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:40,481 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:40,482 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:40,482 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:40,482 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:40,541 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:40,545 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:40,575 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:40,767 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00016_nis_rate.fits>,).
2024-03-13 20:44:40,768 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:40,769 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:40,773 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:40,773 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00016_nis
2024-03-13 20:44:40,775 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:40,775 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:41,045 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00016_nis_cal.fits
2024-03-13 20:44:41,046 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
2024-03-13 20:44:41,103 - stpipe - INFO - PARS-IMAGE2PIPELINE parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-image2pipeline_0002.asdf
2024-03-13 20:44:41,116 - stpipe.Image2Pipeline - INFO - Image2Pipeline instance created.
2024-03-13 20:44:41,117 - stpipe.Image2Pipeline.bkg_subtract - INFO - BackgroundStep instance created.
2024-03-13 20:44:41,118 - stpipe.Image2Pipeline.assign_wcs - INFO - AssignWcsStep instance created.
2024-03-13 20:44:41,119 - stpipe.Image2Pipeline.flat_field - INFO - FlatFieldStep instance created.
2024-03-13 20:44:41,120 - stpipe.Image2Pipeline.photom - INFO - PhotomStep instance created.
2024-03-13 20:44:41,122 - stpipe.Image2Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:41,312 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline running with args ('detector1/jw01475006001_02201_00017_nis_rate.fits',).
2024-03-13 20:44:41,316 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image2/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_bsub': False, 'steps': {'bkg_subtract': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_combined_background': False, 'sigma': 3.0, 'maxiters': None, 'wfss_mmag_extract': None}, 'assign_wcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}, 'flat_field': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}, 'photom': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': True, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}}}
2024-03-13 20:44:41,369 - stpipe.Image2Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00017_nis_rate.fits' reftypes = ['area', 'camera', 'collimator', 'dflat', 'disperser', 'distortion', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'ifufore', 'ifupost', 'ifuslicer', 'msa', 'ote', 'photom', 'regions', 'sflat', 'specwcs', 'wavelengthrange']
2024-03-13 20:44:41,372 - stpipe.Image2Pipeline - INFO - Prefetch for AREA reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits'.
2024-03-13 20:44:41,373 - stpipe.Image2Pipeline - INFO - Prefetch for CAMERA reference file is 'N/A'.
2024-03-13 20:44:41,373 - stpipe.Image2Pipeline - INFO - Prefetch for COLLIMATOR reference file is 'N/A'.
2024-03-13 20:44:41,374 - stpipe.Image2Pipeline - INFO - Prefetch for DFLAT reference file is 'N/A'.
2024-03-13 20:44:41,374 - stpipe.Image2Pipeline - INFO - Prefetch for DISPERSER reference file is 'N/A'.
2024-03-13 20:44:41,374 - stpipe.Image2Pipeline - INFO - Prefetch for DISTORTION reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_distortion_0047.asdf'.
2024-03-13 20:44:41,375 - stpipe.Image2Pipeline - INFO - Prefetch for FFLAT reference file is 'N/A'.
2024-03-13 20:44:41,375 - stpipe.Image2Pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_filteroffset_0006.asdf'.
2024-03-13 20:44:41,376 - stpipe.Image2Pipeline - INFO - Prefetch for FLAT reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits'.
2024-03-13 20:44:41,376 - stpipe.Image2Pipeline - INFO - Prefetch for FORE reference file is 'N/A'.
2024-03-13 20:44:41,377 - stpipe.Image2Pipeline - INFO - Prefetch for FPA reference file is 'N/A'.
2024-03-13 20:44:41,377 - stpipe.Image2Pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2024-03-13 20:44:41,377 - stpipe.Image2Pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2024-03-13 20:44:41,378 - stpipe.Image2Pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2024-03-13 20:44:41,378 - stpipe.Image2Pipeline - INFO - Prefetch for MSA reference file is 'N/A'.
2024-03-13 20:44:41,379 - stpipe.Image2Pipeline - INFO - Prefetch for OTE reference file is 'N/A'.
2024-03-13 20:44:41,379 - stpipe.Image2Pipeline - INFO - Prefetch for PHOTOM reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits'.
2024-03-13 20:44:41,379 - stpipe.Image2Pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2024-03-13 20:44:41,380 - stpipe.Image2Pipeline - INFO - Prefetch for SFLAT reference file is 'N/A'.
2024-03-13 20:44:41,380 - stpipe.Image2Pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2024-03-13 20:44:41,381 - stpipe.Image2Pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is 'N/A'.
2024-03-13 20:44:41,382 - stpipe.Image2Pipeline - INFO - Starting calwebb_image2 ...
2024-03-13 20:44:41,382 - stpipe.Image2Pipeline - INFO - Processing product detector1/jw01475006001_02201_00017_nis
2024-03-13 20:44:41,382 - stpipe.Image2Pipeline - INFO - Working on input detector1/jw01475006001_02201_00017_nis_rate.fits ...
2024-03-13 20:44:41,632 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00017_nis_rate.fits>,).
2024-03-13 20:44:41,633 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'sip_approx': True, 'sip_max_pix_error': 0.1, 'sip_degree': None, 'sip_max_inv_pix_error': 0.1, 'sip_inv_degree': None, 'sip_npoints': 12, 'slit_y_low': -0.55, 'slit_y_high': 0.55}
2024-03-13 20:44:41,814 - stpipe.Image2Pipeline.assign_wcs - INFO - Offsets from filteroffset file are 0.0, 0.0
2024-03-13 20:44:41,884 - stpipe.Image2Pipeline.assign_wcs - INFO - Update S_REGION to POLYGON ICRS 303.744319371 -26.791902974 303.784967553 -26.782816011 303.774662848 -26.746838158 303.734052767 -26.755906819
2024-03-13 20:44:41,885 - stpipe.Image2Pipeline.assign_wcs - INFO - assign_wcs updated S_REGION to POLYGON ICRS 303.744319371 -26.791902974 303.784967553 -26.782816011 303.774662848 -26.746838158 303.734052767 -26.755906819
2024-03-13 20:44:41,885 - stpipe.Image2Pipeline.assign_wcs - INFO - COMPLETED assign_wcs
2024-03-13 20:44:41,943 - stpipe.Image2Pipeline.assign_wcs - INFO - Step assign_wcs done
2024-03-13 20:44:42,140 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00017_nis_rate.fits>,).
2024-03-13 20:44:42,141 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'save_interpolated_flat': False, 'user_supplied_flat': None, 'inverse': False}
2024-03-13 20:44:42,249 - stpipe.Image2Pipeline.flat_field - INFO - Using FLAT reference file: crds_cache/references/jwst/niriss/jwst_niriss_flat_0282.fits
2024-03-13 20:44:42,250 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type FFLAT
2024-03-13 20:44:42,250 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type SFLAT
2024-03-13 20:44:42,251 - stpipe.Image2Pipeline.flat_field - INFO - No reference found for type DFLAT
2024-03-13 20:44:42,381 - stpipe.Image2Pipeline.flat_field - INFO - Step flat_field done
2024-03-13 20:44:42,581 - stpipe.Image2Pipeline.photom - INFO - Step photom running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00017_nis_rate.fits>,).
2024-03-13 20:44:42,583 - stpipe.Image2Pipeline.photom - INFO - Step photom parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': 'detector1', 'inverse': False, 'source_type': None, 'mrs_time_correction': True}
2024-03-13 20:44:42,607 - stpipe.Image2Pipeline.photom - INFO - Using photom reference file: crds_cache/references/jwst/niriss/jwst_niriss_photom_0043.fits
2024-03-13 20:44:42,608 - stpipe.Image2Pipeline.photom - INFO - Using area reference file: crds_cache/references/jwst/niriss/jwst_niriss_area_0021.fits
2024-03-13 20:44:42,646 - stpipe.Image2Pipeline.photom - INFO - Using instrument: NIRISS
2024-03-13 20:44:42,646 - stpipe.Image2Pipeline.photom - INFO - detector: NIS
2024-03-13 20:44:42,647 - stpipe.Image2Pipeline.photom - INFO - exp_type: NIS_IMAGE
2024-03-13 20:44:42,647 - stpipe.Image2Pipeline.photom - INFO - filter: CLEAR
2024-03-13 20:44:42,648 - stpipe.Image2Pipeline.photom - INFO - pupil: F150W
2024-03-13 20:44:42,707 - stpipe.Image2Pipeline.photom - INFO - Pixel area map copied to output.
2024-03-13 20:44:42,710 - stpipe.Image2Pipeline.photom - INFO - PHOTMJSR value: 0.256732
2024-03-13 20:44:42,740 - stpipe.Image2Pipeline.photom - INFO - Step photom done
2024-03-13 20:44:42,941 - stpipe.Image2Pipeline.resample - INFO - Step resample running with args (<ImageModel(2048, 2048) from jw01475006001_02201_00017_nis_rate.fits>,).
2024-03-13 20:44:42,943 - stpipe.Image2Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': True, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': 'detector1', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:44:42,943 - stpipe.Image2Pipeline.resample - INFO - Step skipped.
2024-03-13 20:44:42,947 - stpipe.Image2Pipeline.resample - INFO - Step resample done
2024-03-13 20:44:42,948 - stpipe.Image2Pipeline - INFO - Finished processing product detector1/jw01475006001_02201_00017_nis
2024-03-13 20:44:42,950 - stpipe.Image2Pipeline - INFO - ... ending calwebb_image2
2024-03-13 20:44:42,950 - stpipe.Image2Pipeline - INFO - Results used CRDS context: jwst_1214.pmap
2024-03-13 20:44:43,221 - stpipe.Image2Pipeline - INFO - Saved model in image2/jw01475006001_02201_00017_nis_cal.fits
2024-03-13 20:44:43,221 - stpipe.Image2Pipeline - INFO - Step Image2Pipeline done
Identify *_cal.fits files#
cal_files = sorted(glob.glob(os.path.join(image2_dir, '*_cal.fits')))
Verify which pipeline steps were run#
cal_f = datamodels.open(cal_files[0])
cal_f.meta.cal_step.instance
{'assign_wcs': 'COMPLETE',
'charge_migration': 'COMPLETE',
'dark_sub': 'COMPLETE',
'dq_init': 'COMPLETE',
'flat_field': 'COMPLETE',
'gain_scale': 'SKIPPED',
'group_scale': 'SKIPPED',
'ipc': 'SKIPPED',
'jump': 'COMPLETE',
'linearity': 'COMPLETE',
'persistence': 'SKIPPED',
'photom': 'COMPLETE',
'ramp_fit': 'COMPLETE',
'refpix': 'COMPLETE',
'resample': 'SKIPPED',
'saturation': 'COMPLETE',
'superbias': 'COMPLETE'}
Check which reference files were used to calibrate the dataset:
cal_f.meta.ref_file.instance
{'area': {'name': 'crds://jwst_niriss_area_0021.fits'},
'camera': {'name': 'N/A'},
'collimator': {'name': 'N/A'},
'crds': {'context_used': 'jwst_1214.pmap', 'sw_version': '11.17.19'},
'dark': {'name': 'crds://jwst_niriss_dark_0169.fits'},
'dflat': {'name': 'N/A'},
'disperser': {'name': 'N/A'},
'distortion': {'name': 'crds://jwst_niriss_distortion_0047.asdf'},
'fflat': {'name': 'N/A'},
'filteroffset': {'name': 'crds://jwst_niriss_filteroffset_0006.asdf'},
'flat': {'name': 'crds://jwst_niriss_flat_0282.fits'},
'fore': {'name': 'N/A'},
'fpa': {'name': 'N/A'},
'gain': {'name': 'crds://jwst_niriss_gain_0006.fits'},
'ifufore': {'name': 'N/A'},
'ifupost': {'name': 'N/A'},
'ifuslicer': {'name': 'N/A'},
'linearity': {'name': 'crds://jwst_niriss_linearity_0017.fits'},
'mask': {'name': 'crds://jwst_niriss_mask_0017.fits'},
'msa': {'name': 'N/A'},
'ote': {'name': 'N/A'},
'photom': {'name': 'crds://jwst_niriss_photom_0043.fits'},
'readnoise': {'name': 'crds://jwst_niriss_readnoise_0005.fits'},
'regions': {'name': 'N/A'},
'saturation': {'name': 'crds://jwst_niriss_saturation_0015.fits'},
'sflat': {'name': 'N/A'},
'specwcs': {'name': 'N/A'},
'superbias': {'name': 'crds://jwst_niriss_superbias_0183.fits'},
'wavelengthrange': {'name': 'N/A'}}
Display cal image#
Visualize a calibrated image, using the dataset from the first dither position as an example.
# Create an Imviz instance and set up default viewer
imviz_cal = Imviz()
viewer_cal = imviz_cal.default_viewer
# Read in the science array for our visualization dataset:
cal_science = cal_f.data
# Load the dataset into Imviz
imviz_cal.load_data(cal_science)
# Visualize the dataset:
imviz_cal.show()
viewer_cal.stretch = 'sqrt'
viewer_cal.set_colormap('Viridis')
viewer_cal.cuts = '95%'
3. Stage 3 Processing #
In the Image3 stage of the pipeline, the individual *_cal.fits files for each of the dither positions are combined to one single distortion corrected image. First, an Association needs to be created to inform the pipeline that these individual exposures are linked together.
By default, the Image3 stage of the pipeline performs the following steps on NIRISS data:
tweakreg - creates source catalogs of pointlike sources for each input image. The source catalog for each input image is compared to each other to derive coordinate transforms to align the images relative to each other.
As of CRDS context
jwst_1156.pmapand later, thepars-tweakregparameter reference file for NIRISS performs an absolute astrometric correction to GAIA data release 3 by default (i.e., theabs_refcatparameter is set toGAIADR3). Though this default correction generally improves results compared with not doing this alignment, it can sometimes result in poor performance in crowded or sparse fields, so users are encouraged to check astrometric accuracy and revisit this step if necessary.As of pipeline version 1.12.5, the default source finding algorithm is
DAOStarFinderwhich can result in up to 0.5 pix uncertainties in the centroids for undersampled PSFs, like the NIRISS PSFs at short wavelengths (Goudfrooij 2022). There are plans to update the default algorithm toIRAFStarFinderin future pipeline versions.
skymatch - measures the background level from the sky to use as input into the subsequent
outlier detectionandresamplesteps.outlier detection - flags any remaining cosmic rays, bad pixels, or other artifacts not already flagged during the
DETECTOR1stage of the pipeline, using all input images to create a median image so that outliers in individual images can be identified.resample - resamples each input image based on its WCS and distortion information and creates a single undistorted image.
source catalog - creates a catalog of detected sources along with measured photometries and morphologies (i.e., point-like vs extended). Useful for quicklooks, but optimization is likely needed for specific science cases, which is an on-going investigation for the NIRISS team. Users may wish to experiment with changing the
snr_thresholdanddeblendoptions. Modifications to the following parameters will not significantly improve data quality and it is advised to keep them at their default values:aperture_ee1,aperture_ee2,aperture_ee3,ci1_star_threshold,ci2_star_threshold.
Create Association File#
An association file lists the exposures to calibrated together in Stage 3 of the pipeline. Note that an association file is available for download from MAST, with a filename of *_asn.json. Here we show how to create an association file to point to the data products created when processing data through the pipeline. Note that the output products will have a rootname that is specified by the product_name in the association file. For this tutorial, the rootname of the output products will be image3_association.
# Create a Level 3 Association
associations = asn_from_list.asn_from_list(cal_files,
rule=DMS_Level3_Base,
product_name='image3_association')
associations.data['asn_type'] = 'image3'
associations.data['program'] = pid
# Format association as .json file
asn_filename, serialized = associations.dump(format="json")
# Write out association file
with open(asn_filename, "w") as fd:
fd.write(serialized)
2024-03-13 20:44:44,185 - stpipe - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/jwst/associations/association.py:215: UserWarning: 'expname' contains path, but should only be a filename. All input files should be in a single directory, so no path is needed.
2024-03-13 20:44:44,186 - stpipe - WARNING - warnings.warn(err_str, UserWarning)
2024-03-13 20:44:44,186 - stpipe - WARNING -
Run Image3 stage of the pipeline#
Given the grouped exposures in the association file, the Image3 stage of the pipeline will produce:
a
*_cr.fitsfile produced by theoutlier_detectionstep, where theDQarray marks the pixels flagged as outliers.a final combined, rectified image with name
*_i2d.fits,a source catalog with name
*_cat.ecsv,a segmentation map file (
*_segm.fits) which has integer values at the pixel locations where a source is detected where the pixel values match the source ID number in the catalog.
# Define directory to save output from Image2
image3_dir = 'image3/'
# Create directory if it does not exist
if not os.path.isdir(image3_dir):
os.mkdir(image3_dir)
# Run Stage 3
i2d_result = Image3Pipeline.call(asn_filename,
output_dir=image3_dir,
save_results=True)
2024-03-13 20:44:44,349 - stpipe - INFO - PARS-TWEAKREGSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-tweakregstep_0042.asdf
2024-03-13 20:44:44,361 - stpipe - INFO - PARS-OUTLIERDETECTIONSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-outlierdetectionstep_0010.asdf
2024-03-13 20:44:44,377 - stpipe - INFO - PARS-SOURCECATALOGSTEP parameters found: crds_cache/references/jwst/niriss/jwst_niriss_pars-sourcecatalogstep_0011.asdf
2024-03-13 20:44:44,392 - stpipe.Image3Pipeline - INFO - Image3Pipeline instance created.
2024-03-13 20:44:44,392 - stpipe.Image3Pipeline.assign_mtwcs - INFO - AssignMTWcsStep instance created.
2024-03-13 20:44:44,394 - stpipe.Image3Pipeline.tweakreg - INFO - TweakRegStep instance created.
2024-03-13 20:44:44,395 - stpipe.Image3Pipeline.skymatch - INFO - SkyMatchStep instance created.
2024-03-13 20:44:44,397 - stpipe.Image3Pipeline.outlier_detection - INFO - OutlierDetectionStep instance created.
2024-03-13 20:44:44,398 - stpipe.Image3Pipeline.resample - INFO - ResampleStep instance created.
2024-03-13 20:44:44,399 - stpipe.Image3Pipeline.source_catalog - INFO - SourceCatalogStep instance created.
2024-03-13 20:44:44,589 - stpipe.Image3Pipeline - INFO - Step Image3Pipeline running with args ('jw01475-a3001_image3_00019_asn.json',).
2024-03-13 20:44:44,595 - stpipe.Image3Pipeline - INFO - Step Image3Pipeline parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': 'image3/', 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'steps': {'assign_mtwcs': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': True, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'assign_mtwcs', 'search_output_file': True, 'input_dir': ''}, 'tweakreg': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': True, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_catalogs': False, 'use_custom_catalogs': False, 'catalog_format': 'ecsv', 'catfile': '', 'kernel_fwhm': 2.0, 'snr_threshold': 10, 'sharplo': 0.2, 'sharphi': 1.0, 'roundlo': -1.0, 'roundhi': 1.0, 'brightest': 100, 'peakmax': None, 'bkg_boxsize': 400, 'enforce_user_order': False, 'expand_refcat': False, 'minobj': 15, 'searchrad': 1.0, 'use2dhist': True, 'separation': 1.0, 'tolerance': 1.0, 'xoffset': 0.0, 'yoffset': 0.0, 'fitgeometry': 'shift', 'nclip': 3, 'sigma': 3.0, 'abs_refcat': 'GAIADR3', 'save_abs_catalog': False, 'abs_minobj': 15, 'abs_searchrad': 6.0, 'abs_use2dhist': True, 'abs_separation': 0.1, 'abs_tolerance': 0.7, 'abs_fitgeometry': 'rshift', 'abs_nclip': 3, 'abs_sigma': 3.0}, 'skymatch': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'skymethod': 'match', 'match_down': True, 'subtract': False, 'stepsize': None, 'skystat': 'mode', 'dqbits': '~DO_NOT_USE+NON_SCIENCE', 'lower': None, 'upper': None, 'nclip': 5, 'lsigma': 4.0, 'usigma': 4.0, 'binwidth': 0.1}, 'outlier_detection': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': False, 'input_dir': '', 'weight_type': 'ivm', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'nlow': 0, 'nhigh': 0, 'maskpt': 0.7, 'grow': 1, 'snr': '5.0 4.0', 'scale': '2.1 0.7', 'backg': 0.0, 'kernel_size': '7 7', 'threshold_percent': 99.8, 'ifu_second_check': False, 'save_intermediate_results': False, 'resample_data': True, 'good_bits': '~DO_NOT_USE', 'scale_detection': False, 'allowed_memory': None, 'in_memory': False}, 'resample': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}, 'source_catalog': {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': 'cat', 'search_output_file': True, 'input_dir': '', 'bkg_boxsize': 100, 'kernel_fwhm': 3.0, 'snr_threshold': 3.0, 'npixels': 5, 'deblend': False, 'aperture_ee1': 50, 'aperture_ee2': 70, 'aperture_ee3': 80, 'ci1_star_threshold': 1.4, 'ci2_star_threshold': 1.4}}}
2024-03-13 20:44:44,612 - stpipe.Image3Pipeline - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/jwst/associations/association.py:215: UserWarning: 'expname' contains path, but should only be a filename. All input files should be in a single directory, so no path is needed.
2024-03-13 20:44:44,613 - stpipe.Image3Pipeline - WARNING - warnings.warn(err_str, UserWarning)
2024-03-13 20:44:44,613 - stpipe.Image3Pipeline - WARNING -
2024-03-13 20:44:44,742 - stpipe.Image3Pipeline - INFO - Prefetching reference files for dataset: 'jw01475006001_02201_00001_nis_cal.fits' reftypes = ['abvegaoffset', 'apcorr', 'drizpars']
2024-03-13 20:44:44,745 - stpipe.Image3Pipeline - INFO - Prefetch for ABVEGAOFFSET reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_abvegaoffset_0003.asdf'.
2024-03-13 20:44:44,746 - stpipe.Image3Pipeline - INFO - Prefetch for APCORR reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_apcorr_0008.fits'.
2024-03-13 20:44:44,746 - stpipe.Image3Pipeline - INFO - Prefetch for DRIZPARS reference file is 'crds_cache/references/jwst/niriss/jwst_niriss_drizpars_0002.fits'.
2024-03-13 20:44:44,747 - stpipe.Image3Pipeline - INFO - Starting calwebb_image3 ...
2024-03-13 20:44:44,763 - stpipe.Image3Pipeline - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/jwst/associations/association.py:215: UserWarning: 'expname' contains path, but should only be a filename. All input files should be in a single directory, so no path is needed.
2024-03-13 20:44:44,763 - stpipe.Image3Pipeline - WARNING - warnings.warn(err_str, UserWarning)
2024-03-13 20:44:44,763 - stpipe.Image3Pipeline - WARNING -
2024-03-13 20:44:47,293 - stpipe.Image3Pipeline.tweakreg - INFO - Step tweakreg running with args (<ModelContainer>,).
2024-03-13 20:44:47,294 - stpipe.Image3Pipeline.tweakreg - INFO - Step tweakreg parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': True, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'save_catalogs': False, 'use_custom_catalogs': False, 'catalog_format': 'ecsv', 'catfile': '', 'kernel_fwhm': 2.0, 'snr_threshold': 10, 'sharplo': 0.2, 'sharphi': 1.0, 'roundlo': -1.0, 'roundhi': 1.0, 'brightest': 100, 'peakmax': None, 'bkg_boxsize': 400, 'enforce_user_order': False, 'expand_refcat': False, 'minobj': 15, 'searchrad': 1.0, 'use2dhist': True, 'separation': 1.0, 'tolerance': 1.0, 'xoffset': 0.0, 'yoffset': 0.0, 'fitgeometry': 'shift', 'nclip': 3, 'sigma': 3.0, 'abs_refcat': 'GAIADR3', 'save_abs_catalog': False, 'abs_minobj': 15, 'abs_searchrad': 6.0, 'abs_use2dhist': True, 'abs_separation': 0.1, 'abs_tolerance': 0.7, 'abs_fitgeometry': 'rshift', 'abs_nclip': 3, 'abs_sigma': 3.0}
2024-03-13 20:44:47,314 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:47,315 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:47,315 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:48,703 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00001_nis_cal.fits.
2024-03-13 20:44:48,720 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:48,721 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:48,721 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:50,124 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00002_nis_cal.fits.
2024-03-13 20:44:50,141 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:50,142 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:50,142 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:51,551 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00003_nis_cal.fits.
2024-03-13 20:44:51,572 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:51,573 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:51,573 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:52,967 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00004_nis_cal.fits.
2024-03-13 20:44:52,983 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:52,984 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:52,984 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:54,370 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00005_nis_cal.fits.
2024-03-13 20:44:54,391 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:54,392 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:54,392 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:55,790 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00006_nis_cal.fits.
2024-03-13 20:44:55,810 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:55,810 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:55,811 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:57,199 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00007_nis_cal.fits.
2024-03-13 20:44:57,215 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:57,216 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:57,217 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:44:58,599 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00008_nis_cal.fits.
2024-03-13 20:44:58,620 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:44:58,621 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:44:58,621 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:00,007 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00009_nis_cal.fits.
2024-03-13 20:45:00,023 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:00,024 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:00,025 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:01,407 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00010_nis_cal.fits.
2024-03-13 20:45:01,428 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:01,428 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:01,429 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:02,895 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00011_nis_cal.fits.
2024-03-13 20:45:02,912 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:02,913 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:02,913 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:04,295 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00012_nis_cal.fits.
2024-03-13 20:45:04,316 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:04,316 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:04,317 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:05,711 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00013_nis_cal.fits.
2024-03-13 20:45:05,727 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:05,728 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:05,728 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:07,117 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00014_nis_cal.fits.
2024-03-13 20:45:07,138 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:07,138 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:07,139 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:08,528 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00015_nis_cal.fits.
2024-03-13 20:45:08,544 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:08,545 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:08,545 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:09,962 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00016_nis_cal.fits.
2024-03-13 20:45:09,983 - stpipe.Image3Pipeline.tweakreg - WARNING - /opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/photutils/background/background_2d.py:287: AstropyUserWarning: Input data contains invalid values (NaNs or infs), which were automatically masked.
2024-03-13 20:45:09,984 - stpipe.Image3Pipeline.tweakreg - WARNING - warnings.warn('Input data contains invalid values (NaNs or '
2024-03-13 20:45:09,984 - stpipe.Image3Pipeline.tweakreg - WARNING -
2024-03-13 20:45:11,381 - stpipe.Image3Pipeline.tweakreg - INFO - Detected 100 sources in jw01475006001_02201_00017_nis_cal.fits.
2024-03-13 20:45:11,392 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:11,392 - stpipe.Image3Pipeline.tweakreg - INFO - Number of image groups to be aligned: 17.
2024-03-13 20:45:11,393 - stpipe.Image3Pipeline.tweakreg - INFO - Image groups:
2024-03-13 20:45:11,417 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00001_nis_cal':
2024-03-13 20:45:11,418 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00001_nis_cal
2024-03-13 20:45:11,443 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00002_nis_cal':
2024-03-13 20:45:11,444 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00002_nis_cal
2024-03-13 20:45:11,465 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00003_nis_cal':
2024-03-13 20:45:11,465 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00003_nis_cal
2024-03-13 20:45:11,486 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00004_nis_cal':
2024-03-13 20:45:11,487 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00004_nis_cal
2024-03-13 20:45:11,507 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00005_nis_cal':
2024-03-13 20:45:11,507 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00005_nis_cal
2024-03-13 20:45:11,528 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00006_nis_cal':
2024-03-13 20:45:11,529 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00006_nis_cal
2024-03-13 20:45:11,550 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00007_nis_cal':
2024-03-13 20:45:11,550 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00007_nis_cal
2024-03-13 20:45:11,578 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00008_nis_cal':
2024-03-13 20:45:11,578 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00008_nis_cal
2024-03-13 20:45:11,600 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00009_nis_cal':
2024-03-13 20:45:11,600 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00009_nis_cal
2024-03-13 20:45:11,620 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00010_nis_cal':
2024-03-13 20:45:11,621 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00010_nis_cal
2024-03-13 20:45:11,642 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00011_nis_cal':
2024-03-13 20:45:11,642 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00011_nis_cal
2024-03-13 20:45:11,663 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00012_nis_cal':
2024-03-13 20:45:11,663 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00012_nis_cal
2024-03-13 20:45:11,684 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00013_nis_cal':
2024-03-13 20:45:11,685 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00013_nis_cal
2024-03-13 20:45:11,706 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00014_nis_cal':
2024-03-13 20:45:11,706 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00014_nis_cal
2024-03-13 20:45:11,727 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00015_nis_cal':
2024-03-13 20:45:11,728 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00015_nis_cal
2024-03-13 20:45:11,749 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00016_nis_cal':
2024-03-13 20:45:11,749 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00016_nis_cal
2024-03-13 20:45:11,770 - stpipe.Image3Pipeline.tweakreg - INFO - * Images in GROUP 'jw01475006001_02201_00017_nis_cal':
2024-03-13 20:45:11,770 - stpipe.Image3Pipeline.tweakreg - INFO - jw01475006001_02201_00017_nis_cal
2024-03-13 20:45:11,771 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:11,771 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:11,771 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() started on 2024-03-13 20:45:11.771493
2024-03-13 20:45:11,772 - stpipe.Image3Pipeline.tweakreg - INFO - Version 0.8.6
2024-03-13 20:45:11,772 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:35,348 - stpipe.Image3Pipeline.tweakreg - INFO - Selected image 'GROUP ID: jw01475006001_02201_00014_nis_cal' as reference image
2024-03-13 20:45:35,354 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00009_nis_cal' to the reference catalog.
2024-03-13 20:45:35,425 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00009_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:35,426 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:35,427 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.0474 (arcsec) with significance of 40 and 41 matches.
2024-03-13 20:45:35,428 - stpipe.Image3Pipeline.tweakreg - INFO - Found 41 matches for 'GROUP ID: jw01475006001_02201_00009_nis_cal'...
2024-03-13 20:45:35,429 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:35,431 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00009_nis_cal:
2024-03-13 20:45:35,432 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: 0.000374257 YSH: -0.0166366
2024-03-13 20:45:35,432 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:35,433 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.0739278 FIT MAE: 0.032734
2024-03-13 20:45:35,433 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 39 objects.
2024-03-13 20:45:35,468 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00009_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:37,844 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00013_nis_cal' to the reference catalog.
2024-03-13 20:45:37,944 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00013_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:37,944 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:37,946 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 36 and 36 matches.
2024-03-13 20:45:37,947 - stpipe.Image3Pipeline.tweakreg - INFO - Found 40 matches for 'GROUP ID: jw01475006001_02201_00013_nis_cal'...
2024-03-13 20:45:37,948 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:37,950 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00013_nis_cal:
2024-03-13 20:45:37,951 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.0155955 YSH: -0.0172509
2024-03-13 20:45:37,951 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:37,952 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.114281 FIT MAE: 0.0510194
2024-03-13 20:45:37,952 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 38 objects.
2024-03-13 20:45:37,987 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00013_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:40,147 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00010_nis_cal' to the reference catalog.
2024-03-13 20:45:40,229 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00010_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:40,230 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:40,232 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.04723, 0.049 (arcsec) with significance of 35 and 37 matches.
2024-03-13 20:45:40,233 - stpipe.Image3Pipeline.tweakreg - INFO - Found 40 matches for 'GROUP ID: jw01475006001_02201_00010_nis_cal'...
2024-03-13 20:45:40,234 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:40,236 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00010_nis_cal:
2024-03-13 20:45:40,236 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00442815 YSH: 0.0115565
2024-03-13 20:45:40,237 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:40,237 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.128018 FIT MAE: 0.0410505
2024-03-13 20:45:40,237 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 38 objects.
2024-03-13 20:45:40,272 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00010_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:42,250 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00001_nis_cal' to the reference catalog.
2024-03-13 20:45:42,322 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00001_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:42,322 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:42,324 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.04564, 0.049 (arcsec) with significance of 38 and 39 matches.
2024-03-13 20:45:42,325 - stpipe.Image3Pipeline.tweakreg - INFO - Found 41 matches for 'GROUP ID: jw01475006001_02201_00001_nis_cal'...
2024-03-13 20:45:42,325 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:42,328 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00001_nis_cal:
2024-03-13 20:45:42,329 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: 0.00321298 YSH: -0.00704938
2024-03-13 20:45:42,329 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:42,330 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.0507714 FIT MAE: 0.0200248
2024-03-13 20:45:42,330 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 39 objects.
2024-03-13 20:45:42,364 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00001_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:44,142 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00015_nis_cal' to the reference catalog.
2024-03-13 20:45:44,253 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00015_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:44,253 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:44,255 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 38 and 38 matches.
2024-03-13 20:45:44,256 - stpipe.Image3Pipeline.tweakreg - INFO - Found 37 matches for 'GROUP ID: jw01475006001_02201_00015_nis_cal'...
2024-03-13 20:45:44,257 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:44,259 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00015_nis_cal:
2024-03-13 20:45:44,259 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00216641 YSH: 0.00312331
2024-03-13 20:45:44,260 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:44,260 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00564905 FIT MAE: 0.00490708
2024-03-13 20:45:44,260 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 36 objects.
2024-03-13 20:45:44,552 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00015_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:46,189 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00017_nis_cal' to the reference catalog.
2024-03-13 20:45:46,306 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00017_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:46,306 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:46,308 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 37 and 37 matches.
2024-03-13 20:45:46,309 - stpipe.Image3Pipeline.tweakreg - INFO - Found 39 matches for 'GROUP ID: jw01475006001_02201_00017_nis_cal'...
2024-03-13 20:45:46,310 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:46,312 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00017_nis_cal:
2024-03-13 20:45:46,312 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.0352524 YSH: -0.0137221
2024-03-13 20:45:46,313 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:46,313 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.150331 FIT MAE: 0.065197
2024-03-13 20:45:46,313 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 37 objects.
2024-03-13 20:45:46,357 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00017_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:47,815 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00004_nis_cal' to the reference catalog.
2024-03-13 20:45:47,888 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00004_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:47,888 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:47,890 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 37 and 37 matches.
2024-03-13 20:45:47,891 - stpipe.Image3Pipeline.tweakreg - INFO - Found 37 matches for 'GROUP ID: jw01475006001_02201_00004_nis_cal'...
2024-03-13 20:45:47,892 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:47,894 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00004_nis_cal:
2024-03-13 20:45:47,895 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00271341 YSH: -0.0166385
2024-03-13 20:45:47,895 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:47,896 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.0592292 FIT MAE: 0.0205304
2024-03-13 20:45:47,896 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 35 objects.
2024-03-13 20:45:47,930 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00004_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:49,214 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00016_nis_cal' to the reference catalog.
2024-03-13 20:45:49,331 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00016_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:49,332 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:49,333 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 34 and 34 matches.
2024-03-13 20:45:49,334 - stpipe.Image3Pipeline.tweakreg - INFO - Found 35 matches for 'GROUP ID: jw01475006001_02201_00016_nis_cal'...
2024-03-13 20:45:49,335 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:49,337 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00016_nis_cal:
2024-03-13 20:45:49,337 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00855957 YSH: 0.00134625
2024-03-13 20:45:49,338 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:49,338 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00618434 FIT MAE: 0.00532585
2024-03-13 20:45:49,338 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 33 objects.
2024-03-13 20:45:49,388 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00016_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:50,541 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00011_nis_cal' to the reference catalog.
2024-03-13 20:45:50,631 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00011_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:50,632 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:50,633 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.0449, 0.049 (arcsec) with significance of 31 and 32 matches.
2024-03-13 20:45:50,635 - stpipe.Image3Pipeline.tweakreg - INFO - Found 33 matches for 'GROUP ID: jw01475006001_02201_00011_nis_cal'...
2024-03-13 20:45:50,635 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:50,637 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00011_nis_cal:
2024-03-13 20:45:50,638 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00469299 YSH: 0.00435949
2024-03-13 20:45:50,638 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:50,639 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00650849 FIT MAE: 0.00555831
2024-03-13 20:45:50,639 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 31 objects.
2024-03-13 20:45:50,674 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00011_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:51,729 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00006_nis_cal' to the reference catalog.
2024-03-13 20:45:51,802 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00006_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:51,803 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:51,804 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.04666, 0.049 (arcsec) with significance of 27 and 28 matches.
2024-03-13 20:45:51,805 - stpipe.Image3Pipeline.tweakreg - INFO - Found 31 matches for 'GROUP ID: jw01475006001_02201_00006_nis_cal'...
2024-03-13 20:45:51,806 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:51,809 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00006_nis_cal:
2024-03-13 20:45:51,809 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00230991 YSH: 0.00116943
2024-03-13 20:45:51,810 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:51,810 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.142175 FIT MAE: 0.0462756
2024-03-13 20:45:51,811 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 29 objects.
2024-03-13 20:45:51,846 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00006_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:52,752 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00005_nis_cal' to the reference catalog.
2024-03-13 20:45:52,826 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00005_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:52,827 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:52,828 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 36 and 36 matches.
2024-03-13 20:45:52,829 - stpipe.Image3Pipeline.tweakreg - INFO - Found 36 matches for 'GROUP ID: jw01475006001_02201_00005_nis_cal'...
2024-03-13 20:45:52,830 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:52,832 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00005_nis_cal:
2024-03-13 20:45:52,832 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: 0.00238146 YSH: 0.00247609
2024-03-13 20:45:52,833 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:52,833 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00837724 FIT MAE: 0.00739288
2024-03-13 20:45:52,833 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 34 objects.
2024-03-13 20:45:52,868 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00005_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:53,604 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00007_nis_cal' to the reference catalog.
2024-03-13 20:45:53,675 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00007_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:53,676 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:53,677 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 37 and 37 matches.
2024-03-13 20:45:53,678 - stpipe.Image3Pipeline.tweakreg - INFO - Found 38 matches for 'GROUP ID: jw01475006001_02201_00007_nis_cal'...
2024-03-13 20:45:53,679 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:53,681 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00007_nis_cal:
2024-03-13 20:45:53,681 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.0118258 YSH: 0.00151951
2024-03-13 20:45:53,682 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:53,682 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00754341 FIT MAE: 0.0062844
2024-03-13 20:45:53,682 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 37 objects.
2024-03-13 20:45:53,718 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00007_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:54,244 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00012_nis_cal' to the reference catalog.
2024-03-13 20:45:54,328 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00012_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:54,328 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:54,330 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 33 and 33 matches.
2024-03-13 20:45:54,331 - stpipe.Image3Pipeline.tweakreg - INFO - Found 35 matches for 'GROUP ID: jw01475006001_02201_00012_nis_cal'...
2024-03-13 20:45:54,332 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:54,334 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00012_nis_cal:
2024-03-13 20:45:54,334 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00651101 YSH: -0.00103919
2024-03-13 20:45:54,334 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:54,335 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00652245 FIT MAE: 0.00563497
2024-03-13 20:45:54,335 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 33 objects.
2024-03-13 20:45:54,370 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00012_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:54,759 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00008_nis_cal' to the reference catalog.
2024-03-13 20:45:54,831 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00008_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:54,832 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:54,833 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 31 and 31 matches.
2024-03-13 20:45:54,834 - stpipe.Image3Pipeline.tweakreg - INFO - Found 33 matches for 'GROUP ID: jw01475006001_02201_00008_nis_cal'...
2024-03-13 20:45:54,835 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:54,837 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00008_nis_cal:
2024-03-13 20:45:54,838 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.00541009 YSH: -0.00428832
2024-03-13 20:45:54,838 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:54,838 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.00636178 FIT MAE: 0.00560688
2024-03-13 20:45:54,839 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 31 objects.
2024-03-13 20:45:54,874 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00008_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:55,138 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00003_nis_cal' to the reference catalog.
2024-03-13 20:45:55,206 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00003_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:55,207 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:55,208 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.049, 0.049 (arcsec) with significance of 27 and 27 matches.
2024-03-13 20:45:55,209 - stpipe.Image3Pipeline.tweakreg - INFO - Found 28 matches for 'GROUP ID: jw01475006001_02201_00003_nis_cal'...
2024-03-13 20:45:55,210 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:55,213 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00003_nis_cal:
2024-03-13 20:45:55,213 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.0311079 YSH: -0.0045908
2024-03-13 20:45:55,214 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:55,214 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.102981 FIT MAE: 0.0392542
2024-03-13 20:45:55,215 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 27 objects.
2024-03-13 20:45:55,250 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00003_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:55,388 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: jw01475006001_02201_00002_nis_cal' to the reference catalog.
2024-03-13 20:45:55,464 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_00002_nis_cal' catalog with sources from the reference 'jw01475006001_02201_00014_nis_cal' catalog.
2024-03-13 20:45:55,465 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:45:55,466 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of 0.04688, 0.049 (arcsec) with significance of 30 and 31 matches.
2024-03-13 20:45:55,467 - stpipe.Image3Pipeline.tweakreg - INFO - Found 32 matches for 'GROUP ID: jw01475006001_02201_00002_nis_cal'...
2024-03-13 20:45:55,468 - stpipe.Image3Pipeline.tweakreg - INFO - Performing 'shift' fit
2024-03-13 20:45:55,471 - stpipe.Image3Pipeline.tweakreg - INFO - Computed 'shift' fit for GROUP ID: jw01475006001_02201_00002_nis_cal:
2024-03-13 20:45:55,471 - stpipe.Image3Pipeline.tweakreg - INFO - XSH: -0.0034808 YSH: 0.00438276
2024-03-13 20:45:55,472 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:55,472 - stpipe.Image3Pipeline.tweakreg - INFO - FIT RMSE: 0.0168896 FIT MAE: 0.0083061
2024-03-13 20:45:55,472 - stpipe.Image3Pipeline.tweakreg - INFO - Final solution based on 31 objects.
2024-03-13 20:45:55,507 - stpipe.Image3Pipeline.tweakreg - INFO - Failed to align catalog GROUP ID: jw01475006001_02201_00002_nis_cal to the refence catalog. Therefore, it will not be added to the expanded reference catalog.
2024-03-13 20:45:55,508 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:55,508 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() ended on 2024-03-13 20:45:55.508248
2024-03-13 20:45:55,509 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() TOTAL RUN TIME: 0:00:43.736755
2024-03-13 20:45:55,509 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:56,497 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:45:56,497 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() started on 2024-03-13 20:45:56.497335
2024-03-13 20:45:56,498 - stpipe.Image3Pipeline.tweakreg - INFO - Version 0.8.6
2024-03-13 20:45:56,498 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:48:01,504 - stpipe.Image3Pipeline.tweakreg - INFO - Aligning image catalog 'GROUP ID: 987654' to the reference catalog.
2024-03-13 20:48:01,876 - stpipe.Image3Pipeline.tweakreg - INFO - Matching sources from 'jw01475006001_02201_000' catalog with sources from the reference 'Unnamed' catalog.
2024-03-13 20:48:01,876 - stpipe.Image3Pipeline.tweakreg - INFO - Computing initial guess for X and Y shifts...
2024-03-13 20:48:01,880 - stpipe.Image3Pipeline.tweakreg - INFO - Found initial X and Y shifts of -0.4791, 0.6874 (arcsec) with significance of 11.18 and 24 matches.
2024-03-13 20:48:01,881 - stpipe.Image3Pipeline.tweakreg - INFO - Found 8 matches for 'GROUP ID: 987654'...
2024-03-13 20:48:01,881 - stpipe.Image3Pipeline.tweakreg - WARNING - Not enough matches (< 8) found for image catalog 'GROUP ID: 987654'.
2024-03-13 20:48:01,884 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:48:01,884 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() ended on 2024-03-13 20:48:01.884020
2024-03-13 20:48:01,884 - stpipe.Image3Pipeline.tweakreg - INFO - ***** tweakwcs.imalign.align_wcs() TOTAL RUN TIME: 0:02:05.386685
2024-03-13 20:48:01,885 - stpipe.Image3Pipeline.tweakreg - INFO -
2024-03-13 20:48:01,938 - stpipe.Image3Pipeline.tweakreg - INFO - Step tweakreg done
2024-03-13 20:48:02,200 - stpipe.Image3Pipeline.skymatch - INFO - Step skymatch running with args (<ModelContainer>,).
2024-03-13 20:48:02,202 - stpipe.Image3Pipeline.skymatch - INFO - Step skymatch parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': False, 'skip': False, 'suffix': None, 'search_output_file': True, 'input_dir': '', 'skymethod': 'match', 'match_down': True, 'subtract': False, 'stepsize': None, 'skystat': 'mode', 'dqbits': '~DO_NOT_USE+NON_SCIENCE', 'lower': None, 'upper': None, 'nclip': 5, 'lsigma': 4.0, 'usigma': 4.0, 'binwidth': 0.1}
2024-03-13 20:48:02,529 - stpipe.Image3Pipeline.skymatch - INFO -
2024-03-13 20:48:02,530 - stpipe.Image3Pipeline.skymatch - INFO - ***** jwst.skymatch.skymatch.match() started on 2024-03-13 20:48:02.529808
2024-03-13 20:48:02,531 - stpipe.Image3Pipeline.skymatch - INFO -
2024-03-13 20:48:02,531 - stpipe.Image3Pipeline.skymatch - INFO - Sky computation method: 'match'
2024-03-13 20:48:02,531 - stpipe.Image3Pipeline.skymatch - INFO - Sky matching direction: DOWN
2024-03-13 20:48:02,532 - stpipe.Image3Pipeline.skymatch - INFO - Sky subtraction from image data: OFF
2024-03-13 20:48:02,533 - stpipe.Image3Pipeline.skymatch - INFO -
2024-03-13 20:48:02,533 - stpipe.Image3Pipeline.skymatch - INFO - ---- Computing differences in sky values in overlapping regions.
2024-03-13 20:50:10,004 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00001_nis_cal.fits. Sky background: 0.000614169
2024-03-13 20:50:10,005 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00002_nis_cal.fits. Sky background: 0
2024-03-13 20:50:10,005 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00003_nis_cal.fits. Sky background: 0.00189025
2024-03-13 20:50:10,005 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00004_nis_cal.fits. Sky background: 0.00251152
2024-03-13 20:50:10,006 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00005_nis_cal.fits. Sky background: 0.00171756
2024-03-13 20:50:10,006 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00006_nis_cal.fits. Sky background: 0.000921984
2024-03-13 20:50:10,007 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00007_nis_cal.fits. Sky background: 0.000475115
2024-03-13 20:50:10,007 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00008_nis_cal.fits. Sky background: 0.0015875
2024-03-13 20:50:10,008 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00009_nis_cal.fits. Sky background: 0.00101736
2024-03-13 20:50:10,008 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00010_nis_cal.fits. Sky background: 0.0016697
2024-03-13 20:50:10,008 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00011_nis_cal.fits. Sky background: 0.000482348
2024-03-13 20:50:10,009 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00012_nis_cal.fits. Sky background: 0.00081791
2024-03-13 20:50:10,009 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00013_nis_cal.fits. Sky background: 0.00141283
2024-03-13 20:50:10,010 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00014_nis_cal.fits. Sky background: 0.00251605
2024-03-13 20:50:10,010 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00015_nis_cal.fits. Sky background: 0.000766267
2024-03-13 20:50:10,010 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00016_nis_cal.fits. Sky background: 0.00170416
2024-03-13 20:50:10,011 - stpipe.Image3Pipeline.skymatch - INFO - * Image ID=jw01475006001_02201_00017_nis_cal.fits. Sky background: 0.00176161
2024-03-13 20:50:10,011 - stpipe.Image3Pipeline.skymatch - INFO -
2024-03-13 20:50:10,012 - stpipe.Image3Pipeline.skymatch - INFO - ***** jwst.skymatch.skymatch.match() ended on 2024-03-13 20:50:10.011736
2024-03-13 20:50:10,013 - stpipe.Image3Pipeline.skymatch - INFO - ***** jwst.skymatch.skymatch.match() TOTAL RUN TIME: 0:02:07.481928
2024-03-13 20:50:10,013 - stpipe.Image3Pipeline.skymatch - INFO -
2024-03-13 20:50:10,118 - stpipe.Image3Pipeline.skymatch - INFO - Step skymatch done
2024-03-13 20:50:10,389 - stpipe.Image3Pipeline.outlier_detection - INFO - Step outlier_detection running with args (<ModelContainer>,).
2024-03-13 20:50:10,391 - stpipe.Image3Pipeline.outlier_detection - INFO - Step outlier_detection parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': 'crf', 'search_output_file': False, 'input_dir': '', 'weight_type': 'ivm', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'nlow': 0, 'nhigh': 0, 'maskpt': 0.7, 'grow': 1, 'snr': '5.0 4.0', 'scale': '2.1 0.7', 'backg': 0.0, 'kernel_size': '7 7', 'threshold_percent': 99.8, 'ifu_second_check': False, 'save_intermediate_results': False, 'resample_data': True, 'good_bits': '~DO_NOT_USE', 'scale_detection': False, 'allowed_memory': None, 'in_memory': False}
2024-03-13 20:50:10,400 - stpipe.Image3Pipeline.outlier_detection - INFO - Performing outlier detection on 17 inputs
2024-03-13 20:50:10,401 - stpipe.Image3Pipeline.outlier_detection - INFO - Driz parameter kernel: square
2024-03-13 20:50:10,401 - stpipe.Image3Pipeline.outlier_detection - INFO - Driz parameter pixfrac: 1.0
2024-03-13 20:50:10,401 - stpipe.Image3Pipeline.outlier_detection - INFO - Driz parameter fillval: INDEF
2024-03-13 20:50:10,402 - stpipe.Image3Pipeline.outlier_detection - INFO - Driz parameter weight_type: ivm
2024-03-13 20:50:10,402 - stpipe.Image3Pipeline.outlier_detection - INFO - Output pixel scale ratio: 1.0
2024-03-13 20:50:10,540 - stpipe.Image3Pipeline.outlier_detection - INFO - Computed output pixel scale: 0.06556276592712629 arcsec.
2024-03-13 20:50:10,714 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:12,562 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:13,558 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00001_nis_outlier_i2d.fits
2024-03-13 20:50:13,569 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:15,411 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:16,405 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00002_nis_outlier_i2d.fits
2024-03-13 20:50:16,416 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:18,331 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:19,336 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00003_nis_outlier_i2d.fits
2024-03-13 20:50:19,347 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:21,199 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:22,192 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00004_nis_outlier_i2d.fits
2024-03-13 20:50:22,203 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:24,067 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:25,062 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00005_nis_outlier_i2d.fits
2024-03-13 20:50:25,073 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:26,931 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:27,924 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00006_nis_outlier_i2d.fits
2024-03-13 20:50:27,935 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:29,794 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:30,789 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00007_nis_outlier_i2d.fits
2024-03-13 20:50:30,800 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:32,687 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:33,675 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00008_nis_outlier_i2d.fits
2024-03-13 20:50:33,686 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:35,547 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:36,551 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00009_nis_outlier_i2d.fits
2024-03-13 20:50:36,562 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:38,431 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:39,425 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00010_nis_outlier_i2d.fits
2024-03-13 20:50:39,436 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:41,294 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:42,288 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00011_nis_outlier_i2d.fits
2024-03-13 20:50:42,300 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:44,155 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:45,150 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00012_nis_outlier_i2d.fits
2024-03-13 20:50:45,162 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:47,069 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:48,065 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00013_nis_outlier_i2d.fits
2024-03-13 20:50:48,076 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:50,134 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:51,129 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00014_nis_outlier_i2d.fits
2024-03-13 20:50:51,140 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:52,991 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:53,986 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00015_nis_outlier_i2d.fits
2024-03-13 20:50:53,997 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:55,904 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:56,898 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00016_nis_outlier_i2d.fits
2024-03-13 20:50:56,909 - stpipe.Image3Pipeline.outlier_detection - INFO - 1 exposures to drizzle together
2024-03-13 20:50:58,779 - stpipe.Image3Pipeline.outlier_detection - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:50:59,774 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in jw01475006001_02201_00017_nis_outlier_i2d.fits
2024-03-13 20:50:59,907 - stpipe.Image3Pipeline.outlier_detection - INFO - Computing median
2024-03-13 20:51:46,273 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00001_nis_a3001_median.fits
2024-03-13 20:51:46,279 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting median
2024-03-13 20:51:48,393 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:51:48,745 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00001_nis_a3001_blot.fits
2024-03-13 20:51:50,603 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:51:50,956 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00002_nis_a3001_blot.fits
2024-03-13 20:51:52,842 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:51:53,452 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00003_nis_a3001_blot.fits
2024-03-13 20:51:55,349 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:51:55,700 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00004_nis_a3001_blot.fits
2024-03-13 20:51:57,604 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:51:57,954 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00005_nis_a3001_blot.fits
2024-03-13 20:51:59,831 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:00,181 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00006_nis_a3001_blot.fits
2024-03-13 20:52:02,016 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:02,374 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00007_nis_a3001_blot.fits
2024-03-13 20:52:04,241 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:04,592 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00008_nis_a3001_blot.fits
2024-03-13 20:52:06,414 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:06,764 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00009_nis_a3001_blot.fits
2024-03-13 20:52:08,629 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:09,003 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00010_nis_a3001_blot.fits
2024-03-13 20:52:10,853 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:11,205 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00011_nis_a3001_blot.fits
2024-03-13 20:52:13,037 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:13,395 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00012_nis_a3001_blot.fits
2024-03-13 20:52:15,229 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:15,597 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00013_nis_a3001_blot.fits
2024-03-13 20:52:17,437 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:17,796 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00014_nis_a3001_blot.fits
2024-03-13 20:52:19,648 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:20,004 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00015_nis_a3001_blot.fits
2024-03-13 20:52:21,849 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:22,212 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00016_nis_a3001_blot.fits
2024-03-13 20:52:24,047 - stpipe.Image3Pipeline.outlier_detection - INFO - Blotting (2048, 2048) <-- (2568, 2545)
2024-03-13 20:52:24,401 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00017_nis_a3001_blot.fits
2024-03-13 20:52:24,403 - stpipe.Image3Pipeline.outlier_detection - INFO - Flagging outliers
2024-03-13 20:52:24,756 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4043 (0.10%)
2024-03-13 20:52:25,067 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3795 (0.09%)
2024-03-13 20:52:25,373 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3735 (0.09%)
2024-03-13 20:52:25,943 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4408 (0.11%)
2024-03-13 20:52:26,249 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4141 (0.10%)
2024-03-13 20:52:26,557 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3953 (0.09%)
2024-03-13 20:52:26,865 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3706 (0.09%)
2024-03-13 20:52:27,188 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4184 (0.10%)
2024-03-13 20:52:27,494 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3907 (0.09%)
2024-03-13 20:52:27,820 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4126 (0.10%)
2024-03-13 20:52:28,125 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4233 (0.10%)
2024-03-13 20:52:28,447 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3853 (0.09%)
2024-03-13 20:52:28,761 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3850 (0.09%)
2024-03-13 20:52:29,082 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4025 (0.10%)
2024-03-13 20:52:29,391 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4037 (0.10%)
2024-03-13 20:52:29,717 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 4019 (0.10%)
2024-03-13 20:52:30,024 - stpipe.Image3Pipeline.outlier_detection - INFO - New pixels flagged as outliers: 3883 (0.09%)
2024-03-13 20:52:30,913 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00001_nis_a3001_crf.fits
2024-03-13 20:52:31,176 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00002_nis_a3001_crf.fits
2024-03-13 20:52:31,434 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00003_nis_a3001_crf.fits
2024-03-13 20:52:31,692 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00004_nis_a3001_crf.fits
2024-03-13 20:52:31,951 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00005_nis_a3001_crf.fits
2024-03-13 20:52:32,476 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00006_nis_a3001_crf.fits
2024-03-13 20:52:32,741 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00007_nis_a3001_crf.fits
2024-03-13 20:52:33,000 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00008_nis_a3001_crf.fits
2024-03-13 20:52:33,260 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00009_nis_a3001_crf.fits
2024-03-13 20:52:33,526 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00010_nis_a3001_crf.fits
2024-03-13 20:52:33,803 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00011_nis_a3001_crf.fits
2024-03-13 20:52:34,075 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00012_nis_a3001_crf.fits
2024-03-13 20:52:34,348 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00013_nis_a3001_crf.fits
2024-03-13 20:52:34,609 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00014_nis_a3001_crf.fits
2024-03-13 20:52:34,869 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00015_nis_a3001_crf.fits
2024-03-13 20:52:35,131 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00016_nis_a3001_crf.fits
2024-03-13 20:52:35,391 - stpipe.Image3Pipeline.outlier_detection - INFO - Saved model in image3/jw01475006001_02201_00017_nis_a3001_crf.fits
2024-03-13 20:52:35,391 - stpipe.Image3Pipeline.outlier_detection - INFO - Step outlier_detection done
2024-03-13 20:52:35,640 - stpipe.Image3Pipeline.resample - INFO - Step resample running with args (<ModelContainer>,).
2024-03-13 20:52:35,642 - stpipe.Image3Pipeline.resample - INFO - Step resample parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': 'i2d', 'search_output_file': True, 'input_dir': '', 'pixfrac': 1.0, 'kernel': 'square', 'fillval': 'INDEF', 'weight_type': 'ivm', 'output_shape': None, 'crpix': None, 'crval': None, 'rotation': None, 'pixel_scale_ratio': 1.0, 'pixel_scale': None, 'output_wcs': '', 'single': False, 'blendheaders': True, 'allowed_memory': None, 'in_memory': True}
2024-03-13 20:52:35,663 - stpipe.Image3Pipeline.resample - INFO - Using drizpars reference file: crds_cache/references/jwst/niriss/jwst_niriss_drizpars_0002.fits
2024-03-13 20:52:35,692 - stpipe.Image3Pipeline.resample - INFO - Driz parameter kernel: square
2024-03-13 20:52:35,693 - stpipe.Image3Pipeline.resample - INFO - Driz parameter pixfrac: 1.0
2024-03-13 20:52:35,693 - stpipe.Image3Pipeline.resample - INFO - Driz parameter fillval: INDEF
2024-03-13 20:52:35,693 - stpipe.Image3Pipeline.resample - INFO - Driz parameter weight_type: ivm
2024-03-13 20:52:35,694 - stpipe.Image3Pipeline.resample - INFO - Output pixel scale ratio: 1.0
2024-03-13 20:52:35,842 - stpipe.Image3Pipeline.resample - INFO - Computed output pixel scale: 0.06556276592712629 arcsec.
2024-03-13 20:52:35,920 - stpipe.Image3Pipeline.resample - INFO - Blending metadata for image3_association
2024-03-13 20:52:36,948 - stpipe.Image3Pipeline.resample - INFO - Resampling science data
2024-03-13 20:52:38,473 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:40,836 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:43,203 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:45,562 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:47,924 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:50,292 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:52,638 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:54,993 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:57,356 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:52:59,693 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:02,051 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:04,401 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:06,758 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:09,121 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:11,476 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:13,823 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:16,173 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:17,002 - stpipe.Image3Pipeline.resample - INFO - Resampling var_rnoise
2024-03-13 20:53:18,485 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:20,814 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:23,153 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:25,506 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:27,829 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:30,172 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:32,508 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:34,855 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:37,196 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:39,550 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:41,882 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:44,194 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:46,509 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:48,856 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:51,196 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:53,503 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:55,845 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:53:56,702 - stpipe.Image3Pipeline.resample - INFO - Resampling var_poisson
2024-03-13 20:53:58,176 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:00,502 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:02,835 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:05,170 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:07,501 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:09,825 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:12,153 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:14,469 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:16,795 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:19,123 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:21,471 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:23,779 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:26,095 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:28,414 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:30,745 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:33,076 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:35,396 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:36,257 - stpipe.Image3Pipeline.resample - INFO - Resampling var_flat
2024-03-13 20:54:37,734 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:40,054 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:42,376 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:44,702 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:47,030 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:49,356 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:51,660 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:53,993 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:56,310 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:54:58,643 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:00,960 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:03,271 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:05,585 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:07,915 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:10,245 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:12,555 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:14,864 - stpipe.Image3Pipeline.resample - INFO - Drizzling (2048, 2048) --> (2568, 2545)
2024-03-13 20:55:15,773 - stpipe.Image3Pipeline.resample - INFO - Update S_REGION to POLYGON ICRS 303.737924213 -26.798107375 303.788749306 -26.786752702 303.776138546 -26.741791949 303.725332311 -26.753142128
2024-03-13 20:55:16,370 - stpipe.Image3Pipeline.resample - INFO - Saved model in image3/image3_association_i2d.fits
2024-03-13 20:55:16,370 - stpipe.Image3Pipeline.resample - INFO - Step resample done
2024-03-13 20:55:16,622 - stpipe.Image3Pipeline.source_catalog - INFO - Step source_catalog running with args (<ImageModel(2568, 2545) from image3_association_i2d.fits>,).
2024-03-13 20:55:16,623 - stpipe.Image3Pipeline.source_catalog - INFO - Step source_catalog parameters are: {'pre_hooks': [], 'post_hooks': [], 'output_file': None, 'output_dir': None, 'output_ext': '.fits', 'output_use_model': False, 'output_use_index': True, 'save_results': True, 'skip': False, 'suffix': 'cat', 'search_output_file': True, 'input_dir': '', 'bkg_boxsize': 100, 'kernel_fwhm': 3.0, 'snr_threshold': 3.0, 'npixels': 5, 'deblend': False, 'aperture_ee1': 50, 'aperture_ee2': 70, 'aperture_ee3': 80, 'ci1_star_threshold': 1.4, 'ci2_star_threshold': 1.4}
2024-03-13 20:55:16,639 - stpipe.Image3Pipeline.source_catalog - INFO - Using APCORR reference file: crds_cache/references/jwst/niriss/jwst_niriss_apcorr_0008.fits
2024-03-13 20:55:16,647 - stpipe.Image3Pipeline.source_catalog - INFO - Using ABVEGAOFFSET reference file: crds_cache/references/jwst/niriss/jwst_niriss_abvegaoffset_0003.asdf
2024-03-13 20:55:16,647 - stpipe.Image3Pipeline.source_catalog - INFO - Instrument: NIRISS
2024-03-13 20:55:16,648 - stpipe.Image3Pipeline.source_catalog - INFO - Detector: NIS
2024-03-13 20:55:16,648 - stpipe.Image3Pipeline.source_catalog - INFO - Filter: CLEAR
2024-03-13 20:55:16,649 - stpipe.Image3Pipeline.source_catalog - INFO - Pupil: F150W
2024-03-13 20:55:16,649 - stpipe.Image3Pipeline.source_catalog - INFO - Subarray: FULL
2024-03-13 20:55:16,709 - stpipe.Image3Pipeline.source_catalog - INFO - AB to Vega magnitude offset 1.19753
2024-03-13 20:55:21,079 - stpipe.Image3Pipeline.source_catalog - INFO - Detected 2383 sources
2024-03-13 20:55:22,671 - stpipe.Image3Pipeline.source_catalog - INFO - Wrote source catalog: image3/image3_association_cat.ecsv
2024-03-13 20:55:22,830 - stpipe.Image3Pipeline.source_catalog - INFO - Saved model in image3/image3_association_segm.fits
2024-03-13 20:55:22,832 - stpipe.Image3Pipeline.source_catalog - INFO - Wrote segmentation map: image3_association_segm.fits
2024-03-13 20:55:22,834 - stpipe.Image3Pipeline.source_catalog - INFO - Step source_catalog done
2024-03-13 20:55:22,843 - stpipe.Image3Pipeline - INFO - Step Image3Pipeline done
Verify which pipeline steps were run#
# Identify *_i2d file and open as datamodel
i2d = glob.glob(os.path.join(image3_dir, "*_i2d.fits"))[0]
i2d_f = datamodels.open(i2d)
i2d_f.meta.cal_step.instance
{'assign_wcs': 'COMPLETE',
'charge_migration': 'COMPLETE',
'dark_sub': 'COMPLETE',
'dq_init': 'COMPLETE',
'flat_field': 'COMPLETE',
'gain_scale': 'SKIPPED',
'group_scale': 'SKIPPED',
'ipc': 'SKIPPED',
'jump': 'COMPLETE',
'linearity': 'COMPLETE',
'outlier_detection': 'COMPLETE',
'persistence': 'SKIPPED',
'photom': 'COMPLETE',
'ramp_fit': 'COMPLETE',
'refpix': 'COMPLETE',
'resample': 'COMPLETE',
'saturation': 'COMPLETE',
'skymatch': 'COMPLETE',
'superbias': 'COMPLETE',
'tweakreg': 'COMPLETE'}
Check which reference files were used to calibrate the dataset:
i2d_f.meta.ref_file.instance
{'area': {'name': 'crds://jwst_niriss_area_0021.fits'},
'camera': {'name': 'N/A'},
'collimator': {'name': 'N/A'},
'crds': {'context_used': 'jwst_1214.pmap', 'sw_version': '11.17.19'},
'dark': {'name': 'crds://jwst_niriss_dark_0169.fits'},
'dflat': {'name': 'N/A'},
'disperser': {'name': 'N/A'},
'distortion': {'name': 'crds://jwst_niriss_distortion_0047.asdf'},
'drizpars': {'name': 'crds://jwst_niriss_drizpars_0002.fits'},
'fflat': {'name': 'N/A'},
'filteroffset': {'name': 'crds://jwst_niriss_filteroffset_0006.asdf'},
'flat': {'name': 'crds://jwst_niriss_flat_0282.fits'},
'fore': {'name': 'N/A'},
'fpa': {'name': 'N/A'},
'gain': {'name': 'crds://jwst_niriss_gain_0006.fits'},
'ifufore': {'name': 'N/A'},
'ifupost': {'name': 'N/A'},
'ifuslicer': {'name': 'N/A'},
'linearity': {'name': 'crds://jwst_niriss_linearity_0017.fits'},
'mask': {'name': 'crds://jwst_niriss_mask_0017.fits'},
'msa': {'name': 'N/A'},
'ote': {'name': 'N/A'},
'photom': {'name': 'crds://jwst_niriss_photom_0043.fits'},
'readnoise': {'name': 'crds://jwst_niriss_readnoise_0005.fits'},
'regions': {'name': 'N/A'},
'saturation': {'name': 'crds://jwst_niriss_saturation_0015.fits'},
'sflat': {'name': 'N/A'},
'specwcs': {'name': 'N/A'},
'superbias': {'name': 'crds://jwst_niriss_superbias_0183.fits'},
'wavelengthrange': {'name': 'N/A'}}
Display combined image#
Visualize the drizzle-combined image.
# Create an Imviz instance and set up default viewer
imviz_i2d = Imviz()
viewer_i2d = imviz_i2d.default_viewer
# Read in the science array for our visualization dataset:
i2d_science = i2d_f.data
# Load the dataset into Imviz
imviz_i2d.load_data(i2d_science)
# Visualize the dataset:
imviz_i2d.show()
viewer_i2d.stretch = 'sqrt'
viewer_i2d.set_colormap('Viridis')
viewer_i2d.cuts = '95%'
Visualize Detected Sources#
Using the source catalog created by the IMAGE3 stage of the pipeline, mark the detected sources, using different markers for point sources and extended sources. The source catalog is saved in image3/image3_association_cat.ecsv file. We will need to read in the i2d file again to make sure the world coordinate system (WCS) info is read in.
Read in catalog file and identify point/extended sources#
catalog_file = glob.glob(os.path.join(image3_dir, "*_cat.ecsv"))[0]
catalog = Table.read(catalog_file)
# To identify point/extended sources, use the 'is_extended' column in the source catalog
pt_src, = np.where(~catalog['is_extended'])
ext_src, = np.where(catalog['is_extended'])
# Define coordinates of point and extended sources
pt_coord = Table({'coord': [SkyCoord(ra=catalog['sky_centroid'][pt_src].ra,
dec=catalog['sky_centroid'][pt_src].dec)]})
ext_coord = Table({'coord': [SkyCoord(ra=catalog['sky_centroid'][ext_src].ra,
dec=catalog['sky_centroid'][ext_src].dec)]})
Mark the extended and point sources on the image#
Display combined image:
# Read in i2d file to Imviz
imviz_cat = Imviz()
viewer_cat = imviz_cat.default_viewer
imviz_cat.load_data(i2d)
# Adjust settings for viewer
viewer_cat.stretch = 'sqrt'
viewer_cat.set_colormap('Viridis')
viewer_cat.cuts = '95%'
imviz_cat.show()
Point sources will be marked by small pink circles and extended sources will be marked by larger white circles.
# Add marker for point sources:
viewer_cat.marker = {'color': 'pink', 'markersize': 50, 'fill': False}
viewer_cat.add_markers(pt_coord, use_skycoord=True, marker_name='point_sources')
# Add marker for extended sources:
viewer_cat.marker = {'color': 'white', 'markersize': 100, 'fill': False}
viewer_cat.add_markers(ext_coord, use_skycoord=True, marker_name='extended_sources')
From zoooming in on different portions of the image, we can see that some saturated point sources are erroneously labeled as point sources, some extended and saturated objects are not detected, parts of diffraction spikes are sometimes detected as “extended sources”, and in some cases, the detected source centroid is offset from the center of a source. It is recommended for users to optimize source detection for their science goals using either their own tools or by updating parameters to the source_catalog step of the pipeline.