Extracting FS Data from MOS/IFU Observations#
Authors: Kayli Glidic (kglidic@stsci.edu), with contributions from Chris Hayes; NIRSpec branch
Last Updated: April 30, 2026
Purpose:
The primary goal of this notebook is to demonstrate how to extract fixed slit (FS) data from multi-object spectroscopy (MOS) and integral field unit (IFU) NIRSpec observations.
Data:
This notebook is set up to use PRISM MOS and IFU observations in which the fixed slits (FS) were generally observing background. The data were obtained from Proposal IDs (PIDs) 2750 (MOS) and 1216 (IFU).
Table of Contents#
1. Introduction#
The Near Infrared Spectrograph (NIRSpec) includes several FS apertures machined directly into the mounting plate of the micro-shutter assembly (MSA).
The available NIRSpec FS’s are:
S200A1
S200A2
S200B1 (redundant with S200A1; not used for science)
S400A1
S1600A1
These slits remain open during all observations, including MOS and IFU modes. Because these FS spectra fall on a different detector region than MOS or IFU spectra, they are unaffected by failed open MSA shutters. As a result, the FS’s can be used as additional background observations (if no source contamination) or have other sources of potential interest fall within them.
Currently, however, FS data are not automatically processed from MOS or IFU observations, except when planned in APT using the FS + MOS template, which allows FS targets to be explicitly planned and processed.
This notebook provides a workaround for extracting and processing FS data from these types of observations.
2. Package Imports#
# General imports.
import os
import glob
from collections import defaultdict
# Astropy imports.
from astropy.table import Table
from astropy.io import fits
# set CRDS environment variables
os.environ['CRDS_PATH'] = os.environ['HOME']+'/crds_cache'
os.environ['CRDS_SERVER_URL'] = 'https://jwst-crds.stsci.edu'
# JWST pipeline imports.
from jwst.pipeline import Spec2Pipeline # calwebb_spec2
from jwst.pipeline import Spec3Pipeline # calwebb_spec3
# import our own custom helper functions from the utils file in this directory
# these functions handle tasks including downloading data products from MAST, adding
# FS targets to MSA metadata files, creating Stage 3 association files, and plotting NIRSpec spectra
from utils import download_jwst_files, add_fs_target, writel3asn, display_spectra
3. Download the Data#
Below, we will download example MOS and IFU data, along with the corresponding MSA metadata file for the MOS observation. Users can also set optionally set demo to False provide other rate data.
# Define data directory.
data_dir = 'data/'
stage2_dir = os.path.join(data_dir, 'stage2/')
stage3_dir = os.path.join(data_dir, 'stage3/')
os.makedirs(data_dir, exist_ok=True)
os.makedirs(stage2_dir, exist_ok=True)
os.makedirs(stage3_dir, exist_ok=True)
demo = True
if demo == True:
# Download the demo example MOS and IFU rate files.
mos_rates = [f'jw02750002001_07101_{i:05d}_nrs1_rate.fits' for i in range(1, 4)] # 3 NODS
ifu_rates = [f'jw01216005001_03103_{i:05d}_nrs1_rate.fits' for i in range(1, 9)] # 8 DITHERS
mos_rates = download_jwst_files(mos_rates, data_dir)
ifu_rates = download_jwst_files(ifu_rates, data_dir)
else:
# Provide list of paths to other rate files.
mos_rates = []
ifu_rate = []
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw02750002001_07101_00001_nrs1_rate.fits to data/jw02750002001_07101_00001_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw02750002001_07101_00002_nrs1_rate.fits to data/jw02750002001_07101_00002_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw02750002001_07101_00003_nrs1_rate.fits to data/jw02750002001_07101_00003_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00001_nrs1_rate.fits to data/jw01216005001_03103_00001_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00002_nrs1_rate.fits to data/jw01216005001_03103_00002_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00003_nrs1_rate.fits to data/jw01216005001_03103_00003_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00004_nrs1_rate.fits to data/jw01216005001_03103_00004_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00005_nrs1_rate.fits to data/jw01216005001_03103_00005_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00006_nrs1_rate.fits to data/jw01216005001_03103_00006_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00007_nrs1_rate.fits to data/jw01216005001_03103_00007_nrs1_rate.fits ...
[Done]
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw01216005001_03103_00008_nrs1_rate.fits to data/jw01216005001_03103_00008_nrs1_rate.fits ...
[Done]
# Get the MSA metadata file name from one of the rate headers and download.
msa_metafile_name = fits.getval(mos_rates[0], 'MSAMETFL')
msa_metafile = download_jwst_files([msa_metafile_name], data_dir)[0]
msa_metafile
Downloading URL https://mast.stsci.edu/api/v0.1/Download/file?uri=mast:jwst/product/jw02750002001_01_msa.fits to data/jw02750002001_01_msa.fits ...
[Done]
'data/jw02750002001_01_msa.fits'
4. Prepare to Extract FS Data from MOS Observations#
The NIRSpec MSA metadata file is a crucial component of the calibration processing for MOS exposures. It contains all the slitlet, shutter, and source configuration information required by the calwebb_spec2 pipeline to process a MOS observation accurately. For more information on the contents of these MSA metafiles, refer to this example notebook.
To process FS data from a MOS observation, the FS targets must also be included in the metadata file. In this section, we demonstrate how to edit a metadata file to include each of the FSs.
For this example we are extracting background. So, we assume that the target is centered in each slit, the sources are extended (stellarity = 0), and they are defined as the primary_source in the metadata file so that they are properly processed.
For point sources, the pathloss and wavecorr steps depend on accurate source positioning. Users should carefully inspect their data to ensure the source location is correct when performing FS extraction.
# Load MSA metafile and its source and shutter tables.
msa_hdu_list = fits.open(msa_metafile)
source_table = Table(msa_hdu_list['SOURCE_INFO'].data)
shutter_table = Table(msa_hdu_list['SHUTTER_INFO'].data)
# Source coordinates and stellarity.
ra = 0.0
dec = 0.0
stellarity = 0.0 # point source = 1.0, extended source = 0.0
# Add each FS to the metadata file.
for slit_name in ['S200A1', 'S200A2', 'S400A1', 'S1600A1']:
new_slit_id, new_source_id, shutter_table, source_table = add_fs_target(
shutter_table,
source_table,
mos_rates[0], # Use one of the rate files for general header information.
slit_name,
ra, dec,
stellarity=stellarity
)
msa_hdu_list['SHUTTER_INFO'] = fits.table_to_hdu(shutter_table)
msa_hdu_list['SOURCE_INFO'] = fits.table_to_hdu(source_table)
msa_hdu_list[2].name = 'SHUTTER_INFO'
msa_hdu_list[3].name = 'SOURCE_INFO'
msa_hdu_list.writeto(msa_metafile, overwrite=True)
msa_hdu_list.close()
# Load the MSA metafile and inspect additions.
msa_hdu_list = fits.open(msa_metafile)
source_table = Table(msa_hdu_list['SOURCE_INFO'].data)
shutter_table = Table(msa_hdu_list['SHUTTER_INFO'].data)
shutter_table
Table length=7167
| slitlet_id | msa_metadata_id | shutter_quadrant | shutter_row | shutter_column | source_id | background | shutter_state | estimated_source_in_shutter_x | estimated_source_in_shutter_y | dither_point_index | primary_source | fixed_slit |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| int16 | int16 | int16 | int16 | int16 | int32 | str1 | str6 | float32 | float32 | int16 | str1 | str7 |
| 2 | 1 | 1 | 10 | 116 | 0 | Y | OPEN | nan | nan | 1 | N | NONE |
| 2 | 1 | 1 | 10 | 116 | 0 | Y | OPEN | nan | nan | 2 | N | NONE |
| 2 | 1 | 1 | 10 | 116 | 0 | Y | OPEN | nan | nan | 3 | N | NONE |
| 2 | 1 | 1 | 10 | 117 | 0 | Y | OPEN | nan | nan | 1 | N | NONE |
| 2 | 1 | 1 | 10 | 117 | 0 | Y | OPEN | nan | nan | 2 | N | NONE |
| 2 | 1 | 1 | 10 | 117 | 0 | Y | OPEN | nan | nan | 3 | N | NONE |
| 2 | 1 | 1 | 10 | 118 | 0 | Y | OPEN | nan | nan | 1 | N | NONE |
| 2 | 1 | 1 | 10 | 118 | 0 | Y | OPEN | nan | nan | 2 | N | NONE |
| 2 | 1 | 1 | 10 | 118 | 0 | Y | OPEN | nan | nan | 3 | N | NONE |
| ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... |
| 326 | 327 | 0 | 0 | 0 | 106280 | N | OPEN | 0.5 | 0.5 | 3 | Y | S200A1 |
| 327 | 327 | 0 | 0 | 0 | 106281 | N | OPEN | 0.5 | 0.5 | 1 | Y | S200A2 |
| 327 | 327 | 0 | 0 | 0 | 106281 | N | OPEN | 0.5 | 0.5 | 2 | Y | S200A2 |
| 327 | 327 | 0 | 0 | 0 | 106281 | N | OPEN | 0.5 | 0.5 | 3 | Y | S200A2 |
| 328 | 327 | 0 | 0 | 0 | 106282 | N | OPEN | 0.5 | 0.5 | 1 | Y | S400A1 |
| 328 | 327 | 0 | 0 | 0 | 106282 | N | OPEN | 0.5 | 0.5 | 2 | Y | S400A1 |
| 328 | 327 | 0 | 0 | 0 | 106282 | N | OPEN | 0.5 | 0.5 | 3 | Y | S400A1 |
| 329 | 327 | 0 | 0 | 0 | 106283 | N | OPEN | 0.5 | 0.5 | 1 | Y | S1600A1 |
| 329 | 327 | 0 | 0 | 0 | 106283 | N | OPEN | 0.5 | 0.5 | 2 | Y | S1600A1 |
| 329 | 327 | 0 | 0 | 0 | 106283 | N | OPEN | 0.5 | 0.5 | 3 | Y | S1600A1 |
5. Prepare to Extract FS Data from IFU Observations#
Unlike MOS observations, IFU observations do not require an MSA metadata file for processing spectra through calwebb_spec2. In fact, even the MOS observations do not require a metafile if the goal is simply to extract FS data. To enable FS extraction from IFU or MOS observations, the EXP_TYPE keyword in the rate file header must be set to NRS_FIXEDSLIT, which triggers the pipeline to perform FS spectral extraction. By default, the pipeline treats all FS’s as extended sources and extracts a spectrum from the center of each slit. This is ideal for getting additional background observations. However, if attempting to process a point source, there are several important considerations.
To process a point source, a primary slit must be defined using the
FXD_SLITheader keyword, and the source type must be set to point (SRCTYAPT=POINT); otherwise, the pipeline will continue to treat the source as extended. In addition, for thewavecorrstep to run properly on the selected slit, the correct slit-dependent reference values (V2_REF,V3_REF, andV3I_YANG) must be provided. If these are not updated, the pipeline will retain the original IFU values and may skip this step with a warning about non-invertible corrections.The
XOFFSETandYOFFSETvalues in IFU data are based on their respective dither/nod patterns and do not nessesarily correspond to FS dither/nod positions. As a result, the source may fall within the slit for some exposures but not others. Because the pipeline uses these offsets to estimate the source location, it can incorrectly place the source outside the FS, leading to steps like pathloss being skipped or applied incorrectly and theextract_1dstep to perform poorly.
# Choose a primary FS to process (optional).
FXD_SLIT = None # 'S200A1' or S200A2 or S400A1 or S1600A1
for ifu_rate in ifu_rates:
with fits.open(ifu_rate, 'update') as hdul:
hdul[0].header['EXP_TYPE'] = 'NRS_FIXEDSLIT'
#hdul[0].header['SRCTYAPT'] = 'POINT' # To process primary source as a point source.
if FXD_SLIT == 'S200A1':
hdul[0].header['FXD_SLIT'] = FXD_SLIT # Set the primary slit.
#hdul[0].header['XOFFSET'] = 0.0 # Set for point source but with caution.
#hdul[0].header['YOFFSET'] = 0.0 # Set for point source but with caution.
# Reference postions for S200A1 FS observations.
hdul[1].header['V2_REF'] = 331.867035 # [arcsec] Telescope V2 coord of reference point
hdul[1].header['V3_REF'] = -479.417542 # [arcsec] Telescope V3 coord of reference point
hdul[1].header['VPARITY'] = -1 # Relative sense of rotation between Ideal xy and
hdul[1].header['V3I_YANG'] = 138.84190369 # [deg] Angle from V3 axis to Ideal y axis
elif FXD_SLIT == 'S200A2':
hdul[0].header['FXD_SLIT'] = FXD_SLIT
#hdul[0].header['XOFFSET'] = 0.0
#hdul[0].header['YOFFSET'] = 0.0
# Reference postions for S200A2 FS observations.
hdul[1].header['V2_REF'] = 314.697998
hdul[1].header['V3_REF'] = -489.614227
hdul[1].header['VPARITY'] = -1
hdul[1].header['V3I_YANG'] = 138.91368103
elif FXD_SLIT == 'S400A1':
hdul[0].header['FXD_SLIT'] = FXD_SLIT
#hdul[0].header['XOFFSET'] = 0.0
#hdul[0].header['YOFFSET'] = 0.0
# Reference postions for S400A1 FS observations.
hdul[1].header['V2_REF'] = 321.59079
hdul[1].header['V3_REF'] = -478.107422
hdul[1].header['VPARITY'] = -1
hdul[1].header['V3I_YANG'] = 138.864151
elif FXD_SLIT == 'S1600A1':
hdul[0].header['FXD_SLIT'] = FXD_SLIT
#hdul[0].header['XOFFSET'] = 0.0
#hdul[0].header['YOFFSET'] = 0.0
# Reference postions for S1600A1 FS observations.
hdul[1].header['V2_REF'] = 321.26297
hdul[1].header['V3_REF'] = -473.851288
hdul[1].header['VPARITY'] = -1
hdul[1].header['V3I_YANG'] = 138.85295105
6. Extract FS Data from MOS/IFU Observations (Stage 2)#
Run Stage 2 and extract the spectra. Note we are not providing Stage 2 association files here.
# Select a FS's source to extract and inspect.
slit_names = ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
# Set up a dictionary to define how the Spec2 pipeline should be configured.
spec2dict = defaultdict(dict)
# Extract specific sources; saves on processing time.
if slit_names is not None:
spec2dict['extract_2d']['slit_names'] = slit_names
# We assume the source is centered in the slit.
spec2dict['extract_1d']['use_source_posn'] = True
# Run Stage 2 pipeline using the custom spec2dict dictionary.
for file in mos_rates + ifu_rates:
print(f"Applying Stage 2 Corrections & Calibrations to: {file}")
spec2sci_result = Spec2Pipeline.call(file,
save_results=True,
steps=spec2dict,
output_dir=stage2_dir)
print("Stage 2 has been completed! \n")
Applying Stage 2 Corrections & Calibrations to: data/jw02750002001_07101_00001_nrs1_rate.fits
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2026-05-12 21:02:15,061 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_linearity_0017.rmap 1.6 K bytes (37 / 224 files) (106.2 K / 796.2 K bytes)
2026-05-12 21:02:15,112 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_ipc_0006.rmap 876 bytes (38 / 224 files) (107.7 K / 796.2 K bytes)
2026-05-12 21:02:15,164 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_ifuslicer_0018.rmap 1.5 K bytes (39 / 224 files) (108.6 K / 796.2 K bytes)
2026-05-12 21:02:15,226 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_ifupost_0020.rmap 1.5 K bytes (40 / 224 files) (110.1 K / 796.2 K bytes)
2026-05-12 21:02:15,300 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_ifufore_0017.rmap 1.5 K bytes (41 / 224 files) (111.6 K / 796.2 K bytes)
2026-05-12 21:02:15,367 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_gain_0023.rmap 1.8 K bytes (42 / 224 files) (113.1 K / 796.2 K bytes)
2026-05-12 21:02:15,498 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_fpa_0028.rmap 1.3 K bytes (43 / 224 files) (114.9 K / 796.2 K bytes)
2026-05-12 21:02:15,551 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_fore_0026.rmap 5.0 K bytes (44 / 224 files) (116.2 K / 796.2 K bytes)
2026-05-12 21:02:15,609 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_flat_0015.rmap 3.8 K bytes (45 / 224 files) (121.1 K / 796.2 K bytes)
2026-05-12 21:02:15,658 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_fflat_0030.rmap 7.2 K bytes (46 / 224 files) (124.9 K / 796.2 K bytes)
2026-05-12 21:02:15,706 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_extract1d_0018.rmap 2.3 K bytes (47 / 224 files) (132.1 K / 796.2 K bytes)
2026-05-12 21:02:15,764 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_disperser_0028.rmap 5.7 K bytes (48 / 224 files) (134.4 K / 796.2 K bytes)
2026-05-12 21:02:15,817 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_dflat_0007.rmap 1.1 K bytes (49 / 224 files) (140.1 K / 796.2 K bytes)
2026-05-12 21:02:15,879 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_dark_0085.rmap 37.4 K bytes (50 / 224 files) (141.3 K / 796.2 K bytes)
2026-05-12 21:02:15,945 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_cubepar_0015.rmap 966 bytes (51 / 224 files) (178.7 K / 796.2 K bytes)
2026-05-12 21:02:16,000 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_collimator_0026.rmap 1.3 K bytes (52 / 224 files) (179.6 K / 796.2 K bytes)
2026-05-12 21:02:16,057 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_camera_0026.rmap 1.3 K bytes (53 / 224 files) (181.0 K / 796.2 K bytes)
2026-05-12 21:02:16,117 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_barshadow_0007.rmap 1.8 K bytes (54 / 224 files) (182.3 K / 796.2 K bytes)
2026-05-12 21:02:16,185 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_area_0019.rmap 6.8 K bytes (55 / 224 files) (184.1 K / 796.2 K bytes)
2026-05-12 21:02:16,237 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_apcorr_0009.rmap 5.6 K bytes (56 / 224 files) (190.9 K / 796.2 K bytes)
2026-05-12 21:02:16,308 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nirspec_0432.imap 6.2 K bytes (57 / 224 files) (196.5 K / 796.2 K bytes)
2026-05-12 21:02:16,391 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_wavelengthrange_0008.rmap 897 bytes (58 / 224 files) (202.6 K / 796.2 K bytes)
2026-05-12 21:02:16,484 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_trappars_0004.rmap 753 bytes (59 / 224 files) (203.5 K / 796.2 K bytes)
2026-05-12 21:02:16,539 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_trapdensity_0005.rmap 705 bytes (60 / 224 files) (204.3 K / 796.2 K bytes)
2026-05-12 21:02:16,590 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_throughput_0005.rmap 1.3 K bytes (61 / 224 files) (205.0 K / 796.2 K bytes)
2026-05-12 21:02:16,659 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_superbias_0035.rmap 8.3 K bytes (62 / 224 files) (206.2 K / 796.2 K bytes)
2026-05-12 21:02:16,711 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_specwcs_0017.rmap 3.1 K bytes (63 / 224 files) (214.5 K / 796.2 K bytes)
2026-05-12 21:02:16,761 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_specprofile_0010.rmap 2.5 K bytes (64 / 224 files) (217.7 K / 796.2 K bytes)
2026-05-12 21:02:16,817 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_speckernel_0006.rmap 1.0 K bytes (65 / 224 files) (220.2 K / 796.2 K bytes)
2026-05-12 21:02:16,865 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_sirskernel_0002.rmap 700 bytes (66 / 224 files) (221.2 K / 796.2 K bytes)
2026-05-12 21:02:16,938 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_saturation_0015.rmap 829 bytes (67 / 224 files) (221.9 K / 796.2 K bytes)
2026-05-12 21:02:16,993 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_readnoise_0011.rmap 987 bytes (68 / 224 files) (222.7 K / 796.2 K bytes)
2026-05-12 21:02:17,055 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_photom_0041.rmap 1.3 K bytes (69 / 224 files) (223.7 K / 796.2 K bytes)
2026-05-12 21:02:17,104 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_persat_0007.rmap 674 bytes (70 / 224 files) (225.0 K / 796.2 K bytes)
2026-05-12 21:02:17,166 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pathloss_0003.rmap 758 bytes (71 / 224 files) (225.6 K / 796.2 K bytes)
2026-05-12 21:02:17,225 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pastasoss_0006.rmap 818 bytes (72 / 224 files) (226.4 K / 796.2 K bytes)
2026-05-12 21:02:17,292 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-wfsscontamstep_0001.rmap 797 bytes (73 / 224 files) (227.2 K / 796.2 K bytes)
2026-05-12 21:02:17,358 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-undersamplecorrectionstep_0001.rmap 904 bytes (74 / 224 files) (228.0 K / 796.2 K bytes)
2026-05-12 21:02:17,411 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-tweakregstep_0012.rmap 3.1 K bytes (75 / 224 files) (228.9 K / 796.2 K bytes)
2026-05-12 21:02:17,461 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-spec2pipeline_0009.rmap 1.2 K bytes (76 / 224 files) (232.0 K / 796.2 K bytes)
2026-05-12 21:02:17,519 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-sourcecatalogstep_0002.rmap 2.3 K bytes (77 / 224 files) (233.3 K / 796.2 K bytes)
2026-05-12 21:02:17,600 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-resamplestep_0002.rmap 687 bytes (78 / 224 files) (235.6 K / 796.2 K bytes)
2026-05-12 21:02:17,658 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-outlierdetectionstep_0004.rmap 2.7 K bytes (79 / 224 files) (236.3 K / 796.2 K bytes)
2026-05-12 21:02:17,710 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-jumpstep_0007.rmap 6.4 K bytes (80 / 224 files) (239.0 K / 796.2 K bytes)
2026-05-12 21:02:17,766 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-image2pipeline_0005.rmap 1.0 K bytes (81 / 224 files) (245.3 K / 796.2 K bytes)
2026-05-12 21:02:17,827 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-detector1pipeline_0005.rmap 1.5 K bytes (82 / 224 files) (246.3 K / 796.2 K bytes)
2026-05-12 21:02:17,878 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-darkpipeline_0002.rmap 868 bytes (83 / 224 files) (247.9 K / 796.2 K bytes)
2026-05-12 21:02:17,936 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-darkcurrentstep_0001.rmap 591 bytes (84 / 224 files) (248.8 K / 796.2 K bytes)
2026-05-12 21:02:17,995 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-cleanflickernoisestep_0003.rmap 1.2 K bytes (85 / 224 files) (249.3 K / 796.2 K bytes)
2026-05-12 21:02:18,051 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-chargemigrationstep_0005.rmap 5.7 K bytes (86 / 224 files) (250.6 K / 796.2 K bytes)
2026-05-12 21:02:18,110 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_pars-backgroundstep_0003.rmap 822 bytes (87 / 224 files) (256.2 K / 796.2 K bytes)
2026-05-12 21:02:18,164 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_nrm_0005.rmap 663 bytes (88 / 224 files) (257.0 K / 796.2 K bytes)
2026-05-12 21:02:18,216 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_mask_0025.rmap 1.6 K bytes (89 / 224 files) (257.7 K / 796.2 K bytes)
2026-05-12 21:02:18,278 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_linearity_0022.rmap 961 bytes (90 / 224 files) (259.3 K / 796.2 K bytes)
2026-05-12 21:02:18,338 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_ipc_0007.rmap 651 bytes (91 / 224 files) (260.3 K / 796.2 K bytes)
2026-05-12 21:02:18,399 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_gain_0011.rmap 797 bytes (92 / 224 files) (260.9 K / 796.2 K bytes)
2026-05-12 21:02:18,463 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_flat_0023.rmap 5.9 K bytes (93 / 224 files) (261.7 K / 796.2 K bytes)
2026-05-12 21:02:18,523 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_filteroffset_0010.rmap 853 bytes (94 / 224 files) (267.6 K / 796.2 K bytes)
2026-05-12 21:02:18,575 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_extract1d_0007.rmap 905 bytes (95 / 224 files) (268.4 K / 796.2 K bytes)
2026-05-12 21:02:18,633 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_drizpars_0004.rmap 519 bytes (96 / 224 files) (269.3 K / 796.2 K bytes)
2026-05-12 21:02:18,683 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_distortion_0025.rmap 3.4 K bytes (97 / 224 files) (269.9 K / 796.2 K bytes)
2026-05-12 21:02:18,744 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_dark_0039.rmap 8.3 K bytes (98 / 224 files) (273.3 K / 796.2 K bytes)
2026-05-12 21:02:18,797 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_bkg_0005.rmap 3.1 K bytes (99 / 224 files) (281.6 K / 796.2 K bytes)
2026-05-12 21:02:18,849 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_area_0014.rmap 2.7 K bytes (100 / 224 files) (284.7 K / 796.2 K bytes)
2026-05-12 21:02:18,899 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_apcorr_0010.rmap 4.3 K bytes (101 / 224 files) (287.4 K / 796.2 K bytes)
2026-05-12 21:02:18,949 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_abvegaoffset_0004.rmap 1.4 K bytes (102 / 224 files) (291.7 K / 796.2 K bytes)
2026-05-12 21:02:18,999 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_niriss_0308.imap 5.9 K bytes (103 / 224 files) (293.0 K / 796.2 K bytes)
2026-05-12 21:02:19,050 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_wavelengthrange_0012.rmap 996 bytes (104 / 224 files) (299.0 K / 796.2 K bytes)
2026-05-12 21:02:19,100 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_tsophot_0003.rmap 896 bytes (105 / 224 files) (300.0 K / 796.2 K bytes)
2026-05-12 21:02:19,165 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_trappars_0003.rmap 1.6 K bytes (106 / 224 files) (300.9 K / 796.2 K bytes)
2026-05-12 21:02:19,220 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_trapdensity_0003.rmap 1.6 K bytes (107 / 224 files) (302.5 K / 796.2 K bytes)
2026-05-12 21:02:19,284 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_superbias_0022.rmap 25.5 K bytes (108 / 224 files) (304.1 K / 796.2 K bytes)
2026-05-12 21:02:19,368 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_specwcs_0027.rmap 8.0 K bytes (109 / 224 files) (329.6 K / 796.2 K bytes)
2026-05-12 21:02:19,424 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_sirskernel_0003.rmap 671 bytes (110 / 224 files) (337.6 K / 796.2 K bytes)
2026-05-12 21:02:19,500 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_saturation_0011.rmap 2.8 K bytes (111 / 224 files) (338.3 K / 796.2 K bytes)
2026-05-12 21:02:19,551 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_regions_0003.rmap 3.4 K bytes (112 / 224 files) (341.1 K / 796.2 K bytes)
2026-05-12 21:02:19,603 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_readnoise_0028.rmap 27.1 K bytes (113 / 224 files) (344.5 K / 796.2 K bytes)
2026-05-12 21:02:19,662 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_psfmask_0008.rmap 28.4 K bytes (114 / 224 files) (371.7 K / 796.2 K bytes)
2026-05-12 21:02:19,738 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_photom_0031.rmap 3.4 K bytes (115 / 224 files) (400.0 K / 796.2 K bytes)
2026-05-12 21:02:19,819 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_persat_0005.rmap 1.6 K bytes (116 / 224 files) (403.5 K / 796.2 K bytes)
2026-05-12 21:02:19,872 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-whitelightstep_0004.rmap 2.0 K bytes (117 / 224 files) (405.0 K / 796.2 K bytes)
2026-05-12 21:02:19,935 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-wfsscontamstep_0001.rmap 797 bytes (118 / 224 files) (407.0 K / 796.2 K bytes)
2026-05-12 21:02:19,985 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-tweakregstep_0003.rmap 4.5 K bytes (119 / 224 files) (407.8 K / 796.2 K bytes)
2026-05-12 21:02:20,036 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-tsophotometrystep_0003.rmap 1.1 K bytes (120 / 224 files) (412.3 K / 796.2 K bytes)
2026-05-12 21:02:20,086 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-spec2pipeline_0009.rmap 984 bytes (121 / 224 files) (413.4 K / 796.2 K bytes)
2026-05-12 21:02:20,138 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-sourcecatalogstep_0002.rmap 4.6 K bytes (122 / 224 files) (414.4 K / 796.2 K bytes)
2026-05-12 21:02:20,197 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-resamplestep_0002.rmap 687 bytes (123 / 224 files) (419.0 K / 796.2 K bytes)
2026-05-12 21:02:20,247 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-outlierdetectionstep_0003.rmap 940 bytes (124 / 224 files) (419.7 K / 796.2 K bytes)
2026-05-12 21:02:20,299 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-jumpstep_0005.rmap 806 bytes (125 / 224 files) (420.6 K / 796.2 K bytes)
2026-05-12 21:02:20,367 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-image2pipeline_0004.rmap 1.1 K bytes (126 / 224 files) (421.4 K / 796.2 K bytes)
2026-05-12 21:02:20,416 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-detector1pipeline_0007.rmap 1.7 K bytes (127 / 224 files) (422.6 K / 796.2 K bytes)
2026-05-12 21:02:20,469 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-darkpipeline_0002.rmap 868 bytes (128 / 224 files) (424.3 K / 796.2 K bytes)
2026-05-12 21:02:20,526 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-darkcurrentstep_0001.rmap 618 bytes (129 / 224 files) (425.2 K / 796.2 K bytes)
2026-05-12 21:02:20,577 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_pars-backgroundstep_0003.rmap 822 bytes (130 / 224 files) (425.8 K / 796.2 K bytes)
2026-05-12 21:02:20,627 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_mask_0014.rmap 5.4 K bytes (131 / 224 files) (426.6 K / 796.2 K bytes)
2026-05-12 21:02:20,686 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_linearity_0011.rmap 2.4 K bytes (132 / 224 files) (432.0 K / 796.2 K bytes)
2026-05-12 21:02:20,740 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_ipc_0003.rmap 2.0 K bytes (133 / 224 files) (434.4 K / 796.2 K bytes)
2026-05-12 21:02:20,805 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_gain_0016.rmap 2.1 K bytes (134 / 224 files) (436.4 K / 796.2 K bytes)
2026-05-12 21:02:20,857 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_flat_0028.rmap 51.7 K bytes (135 / 224 files) (438.5 K / 796.2 K bytes)
2026-05-12 21:02:20,946 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_filteroffset_0004.rmap 1.4 K bytes (136 / 224 files) (490.2 K / 796.2 K bytes)
2026-05-12 21:02:21,010 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_extract1d_0007.rmap 2.2 K bytes (137 / 224 files) (491.6 K / 796.2 K bytes)
2026-05-12 21:02:21,062 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_drizpars_0001.rmap 519 bytes (138 / 224 files) (493.8 K / 796.2 K bytes)
2026-05-12 21:02:21,126 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_distortion_0034.rmap 53.4 K bytes (139 / 224 files) (494.3 K / 796.2 K bytes)
2026-05-12 21:02:21,204 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_dark_0054.rmap 33.9 K bytes (140 / 224 files) (547.6 K / 796.2 K bytes)
2026-05-12 21:02:21,303 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_bkg_0002.rmap 7.0 K bytes (141 / 224 files) (581.5 K / 796.2 K bytes)
2026-05-12 21:02:21,371 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_area_0012.rmap 33.5 K bytes (142 / 224 files) (588.5 K / 796.2 K bytes)
2026-05-12 21:02:21,436 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_apcorr_0009.rmap 4.3 K bytes (143 / 224 files) (622.0 K / 796.2 K bytes)
2026-05-12 21:02:21,489 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_abvegaoffset_0004.rmap 1.3 K bytes (144 / 224 files) (626.2 K / 796.2 K bytes)
2026-05-12 21:02:21,567 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_nircam_0354.imap 5.8 K bytes (145 / 224 files) (627.5 K / 796.2 K bytes)
2026-05-12 21:02:21,620 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_wavelengthrange_0030.rmap 1.0 K bytes (146 / 224 files) (633.3 K / 796.2 K bytes)
2026-05-12 21:02:21,686 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_tsophot_0004.rmap 882 bytes (147 / 224 files) (634.3 K / 796.2 K bytes)
2026-05-12 21:02:21,737 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_straymask_0009.rmap 987 bytes (148 / 224 files) (635.2 K / 796.2 K bytes)
2026-05-12 21:02:21,790 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_specwcs_0048.rmap 5.9 K bytes (149 / 224 files) (636.2 K / 796.2 K bytes)
2026-05-12 21:02:21,839 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_saturation_0015.rmap 1.2 K bytes (150 / 224 files) (642.1 K / 796.2 K bytes)
2026-05-12 21:02:21,907 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_rscd_0010.rmap 1.0 K bytes (151 / 224 files) (643.3 K / 796.2 K bytes)
2026-05-12 21:02:21,959 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_resol_0006.rmap 790 bytes (152 / 224 files) (644.3 K / 796.2 K bytes)
2026-05-12 21:02:22,023 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_reset_0026.rmap 3.9 K bytes (153 / 224 files) (645.1 K / 796.2 K bytes)
2026-05-12 21:02:22,087 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_regions_0036.rmap 4.4 K bytes (154 / 224 files) (649.0 K / 796.2 K bytes)
2026-05-12 21:02:22,231 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_readnoise_0023.rmap 1.6 K bytes (155 / 224 files) (653.3 K / 796.2 K bytes)
2026-05-12 21:02:22,279 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_psfmask_0009.rmap 2.1 K bytes (156 / 224 files) (655.0 K / 796.2 K bytes)
2026-05-12 21:02:22,359 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_psf_0008.rmap 2.6 K bytes (157 / 224 files) (657.1 K / 796.2 K bytes)
2026-05-12 21:02:22,415 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_photom_0063.rmap 3.9 K bytes (158 / 224 files) (659.7 K / 796.2 K bytes)
2026-05-12 21:02:22,465 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pathloss_0005.rmap 866 bytes (159 / 224 files) (663.6 K / 796.2 K bytes)
2026-05-12 21:02:22,519 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-whitelightstep_0003.rmap 912 bytes (160 / 224 files) (664.4 K / 796.2 K bytes)
2026-05-12 21:02:22,570 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-wfsscontamstep_0001.rmap 787 bytes (161 / 224 files) (665.4 K / 796.2 K bytes)
2026-05-12 21:02:22,621 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-tweakregstep_0003.rmap 1.8 K bytes (162 / 224 files) (666.1 K / 796.2 K bytes)
2026-05-12 21:02:22,675 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-tsophotometrystep_0003.rmap 2.7 K bytes (163 / 224 files) (668.0 K / 796.2 K bytes)
2026-05-12 21:02:22,736 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-spec3pipeline_0011.rmap 886 bytes (164 / 224 files) (670.6 K / 796.2 K bytes)
2026-05-12 21:02:22,796 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-spec2pipeline_0013.rmap 1.4 K bytes (165 / 224 files) (671.5 K / 796.2 K bytes)
2026-05-12 21:02:22,857 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-sourcecatalogstep_0003.rmap 1.9 K bytes (166 / 224 files) (672.9 K / 796.2 K bytes)
2026-05-12 21:02:22,910 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-resamplestep_0002.rmap 677 bytes (167 / 224 files) (674.9 K / 796.2 K bytes)
2026-05-12 21:02:22,978 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-resamplespecstep_0002.rmap 706 bytes (168 / 224 files) (675.5 K / 796.2 K bytes)
2026-05-12 21:02:23,036 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-outlierdetectionstep_0020.rmap 3.4 K bytes (169 / 224 files) (676.2 K / 796.2 K bytes)
2026-05-12 21:02:23,101 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-jumpstep_0011.rmap 1.6 K bytes (170 / 224 files) (679.6 K / 796.2 K bytes)
2026-05-12 21:02:23,172 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-image2pipeline_0010.rmap 1.1 K bytes (171 / 224 files) (681.2 K / 796.2 K bytes)
2026-05-12 21:02:23,222 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-extract1dstep_0003.rmap 807 bytes (172 / 224 files) (682.3 K / 796.2 K bytes)
2026-05-12 21:02:23,271 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-emicorrstep_0003.rmap 796 bytes (173 / 224 files) (683.1 K / 796.2 K bytes)
2026-05-12 21:02:23,328 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-detector1pipeline_0010.rmap 1.6 K bytes (174 / 224 files) (683.9 K / 796.2 K bytes)
2026-05-12 21:02:23,391 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-darkpipeline_0002.rmap 860 bytes (175 / 224 files) (685.5 K / 796.2 K bytes)
2026-05-12 21:02:23,443 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-darkcurrentstep_0002.rmap 683 bytes (176 / 224 files) (686.3 K / 796.2 K bytes)
2026-05-12 21:02:23,493 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-backgroundstep_0003.rmap 814 bytes (177 / 224 files) (687.0 K / 796.2 K bytes)
2026-05-12 21:02:23,547 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_pars-adaptivetracemodelstep_0002.rmap 979 bytes (178 / 224 files) (687.8 K / 796.2 K bytes)
2026-05-12 21:02:23,602 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_mrsxartcorr_0002.rmap 2.2 K bytes (179 / 224 files) (688.8 K / 796.2 K bytes)
2026-05-12 21:02:23,718 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_mrsptcorr_0005.rmap 2.0 K bytes (180 / 224 files) (691.0 K / 796.2 K bytes)
2026-05-12 21:02:23,769 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_mask_0036.rmap 8.6 K bytes (181 / 224 files) (692.9 K / 796.2 K bytes)
2026-05-12 21:02:23,823 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_linearity_0018.rmap 2.8 K bytes (182 / 224 files) (701.6 K / 796.2 K bytes)
2026-05-12 21:02:23,873 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_ipc_0008.rmap 700 bytes (183 / 224 files) (704.4 K / 796.2 K bytes)
2026-05-12 21:02:23,937 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_gain_0013.rmap 3.9 K bytes (184 / 224 files) (705.1 K / 796.2 K bytes)
2026-05-12 21:02:23,996 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_fringefreq_0003.rmap 1.4 K bytes (185 / 224 files) (709.0 K / 796.2 K bytes)
2026-05-12 21:02:24,058 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_fringe_0019.rmap 3.9 K bytes (186 / 224 files) (710.5 K / 796.2 K bytes)
2026-05-12 21:02:24,114 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_flat_0073.rmap 16.5 K bytes (187 / 224 files) (714.4 K / 796.2 K bytes)
2026-05-12 21:02:24,176 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_filteroffset_0029.rmap 2.4 K bytes (188 / 224 files) (730.9 K / 796.2 K bytes)
2026-05-12 21:02:24,240 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_extract1d_0022.rmap 1.0 K bytes (189 / 224 files) (733.3 K / 796.2 K bytes)
2026-05-12 21:02:24,325 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_emicorr_0004.rmap 663 bytes (190 / 224 files) (734.3 K / 796.2 K bytes)
2026-05-12 21:02:24,376 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_drizpars_0002.rmap 511 bytes (191 / 224 files) (735.0 K / 796.2 K bytes)
2026-05-12 21:02:24,430 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_distortion_0043.rmap 4.8 K bytes (192 / 224 files) (735.5 K / 796.2 K bytes)
2026-05-12 21:02:24,488 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_dark_0039.rmap 4.3 K bytes (193 / 224 files) (740.3 K / 796.2 K bytes)
2026-05-12 21:02:24,557 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_cubepar_0017.rmap 800 bytes (194 / 224 files) (744.6 K / 796.2 K bytes)
2026-05-12 21:02:24,617 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_bkg_0004.rmap 712 bytes (195 / 224 files) (745.4 K / 796.2 K bytes)
2026-05-12 21:02:24,666 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_area_0015.rmap 866 bytes (196 / 224 files) (746.1 K / 796.2 K bytes)
2026-05-12 21:02:24,745 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_apcorr_0023.rmap 5.0 K bytes (197 / 224 files) (746.9 K / 796.2 K bytes)
2026-05-12 21:02:24,797 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_abvegaoffset_0003.rmap 1.3 K bytes (198 / 224 files) (752.0 K / 796.2 K bytes)
2026-05-12 21:02:24,866 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_miri_0487.imap 6.0 K bytes (199 / 224 files) (753.2 K / 796.2 K bytes)
2026-05-12 21:02:24,926 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_trappars_0004.rmap 903 bytes (200 / 224 files) (759.3 K / 796.2 K bytes)
2026-05-12 21:02:24,980 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_trapdensity_0006.rmap 930 bytes (201 / 224 files) (760.2 K / 796.2 K bytes)
2026-05-12 21:02:25,030 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_superbias_0017.rmap 3.8 K bytes (202 / 224 files) (761.1 K / 796.2 K bytes)
2026-05-12 21:02:25,091 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_saturation_0009.rmap 779 bytes (203 / 224 files) (764.9 K / 796.2 K bytes)
2026-05-12 21:02:25,149 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_readnoise_0014.rmap 1.3 K bytes (204 / 224 files) (765.7 K / 796.2 K bytes)
2026-05-12 21:02:25,200 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_photom_0014.rmap 1.1 K bytes (205 / 224 files) (766.9 K / 796.2 K bytes)
2026-05-12 21:02:25,263 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_persat_0006.rmap 884 bytes (206 / 224 files) (768.1 K / 796.2 K bytes)
2026-05-12 21:02:25,321 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-tweakregstep_0002.rmap 850 bytes (207 / 224 files) (769.0 K / 796.2 K bytes)
2026-05-12 21:02:25,389 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-sourcecatalogstep_0001.rmap 636 bytes (208 / 224 files) (769.8 K / 796.2 K bytes)
2026-05-12 21:02:25,445 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-outlierdetectionstep_0001.rmap 654 bytes (209 / 224 files) (770.4 K / 796.2 K bytes)
2026-05-12 21:02:25,501 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-image2pipeline_0005.rmap 974 bytes (210 / 224 files) (771.1 K / 796.2 K bytes)
2026-05-12 21:02:25,563 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-detector1pipeline_0002.rmap 1.0 K bytes (211 / 224 files) (772.1 K / 796.2 K bytes)
2026-05-12 21:02:25,642 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_pars-darkpipeline_0002.rmap 856 bytes (212 / 224 files) (773.1 K / 796.2 K bytes)
2026-05-12 21:02:25,715 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_mask_0023.rmap 1.1 K bytes (213 / 224 files) (774.0 K / 796.2 K bytes)
2026-05-12 21:02:25,770 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_linearity_0015.rmap 925 bytes (214 / 224 files) (775.0 K / 796.2 K bytes)
2026-05-12 21:02:25,828 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_ipc_0003.rmap 614 bytes (215 / 224 files) (775.9 K / 796.2 K bytes)
2026-05-12 21:02:25,879 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_gain_0010.rmap 890 bytes (216 / 224 files) (776.5 K / 796.2 K bytes)
2026-05-12 21:02:25,943 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_flat_0009.rmap 1.1 K bytes (217 / 224 files) (777.4 K / 796.2 K bytes)
2026-05-12 21:02:25,994 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_distortion_0011.rmap 1.2 K bytes (218 / 224 files) (778.6 K / 796.2 K bytes)
2026-05-12 21:02:26,060 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_dark_0017.rmap 4.3 K bytes (219 / 224 files) (779.8 K / 796.2 K bytes)
2026-05-12 21:02:26,125 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_area_0010.rmap 1.2 K bytes (220 / 224 files) (784.1 K / 796.2 K bytes)
2026-05-12 21:02:26,176 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_apcorr_0004.rmap 4.0 K bytes (221 / 224 files) (785.2 K / 796.2 K bytes)
2026-05-12 21:02:26,235 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_abvegaoffset_0002.rmap 1.3 K bytes (222 / 224 files) (789.2 K / 796.2 K bytes)
2026-05-12 21:02:26,285 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_fgs_0125.imap 5.1 K bytes (223 / 224 files) (790.5 K / 796.2 K bytes)
2026-05-12 21:02:26,363 - CRDS - INFO - Fetching /home/runner/crds_cache/mappings/jwst/jwst_1535.pmap 580 bytes (224 / 224 files) (795.6 K / 796.2 K bytes)
2026-05-12 21:02:27,002 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf 1.4 K bytes (1 / 1 files) (0 / 1.4 K bytes)
2026-05-12 21:02:27,064 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:02:27,080 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf 1.0 K bytes (1 / 1 files) (0 / 1.0 K bytes)
2026-05-12 21:02:27,131 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:02:27,143 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:02:27,153 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:02:27,177 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:02:27,178 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:02:27,179 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:02:27,180 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:02:27,181 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:02:27,182 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:02:27,183 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:02:27,184 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:02:27,189 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:02:27,189 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:02:27,190 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:02:27,191 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:02:27,192 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:02:27,193 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:02:27,194 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:02:27,196 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:02:27,196 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:02:27,197 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:02:27,198 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:02:27,199 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:02:27,200 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:02:27,201 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:02:27,201 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:02:27,202 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:02:27,203 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:02:27,204 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:02:27,205 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:02:27,205 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:02:27,206 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:02:27,207 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:02:27,209 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:02:27,210 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:02:27,412 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw02750002001_07101_00001_nrs1_rate.fits',).
2026-05-12 21:02:27,443 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:02:27,476 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw02750002001_07101_00001_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:02:27,483 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0004.fits 1.6 M bytes (1 / 19 files) (0 / 1.7 G bytes)
2026-05-12 21:02:27,647 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0033.fits 2.5 M bytes (2 / 19 files) (1.6 M / 1.7 G bytes)
2026-05-12 21:02:27,823 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_barshadow_0006.fits 3.3 M bytes (3 / 19 files) (4.1 M / 1.7 G bytes)
2026-05-12 21:02:27,992 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf 6.5 K bytes (4 / 19 files) (7.4 M / 1.7 G bytes)
2026-05-12 21:02:28,044 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf 6.5 K bytes (5 / 19 files) (7.4 M / 1.7 G bytes)
2026-05-12 21:02:28,094 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits 688.9 M bytes (6 / 19 files) (7.4 M / 1.7 G bytes)
2026-05-12 21:02:31,841 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf 2.8 K bytes (7 / 19 files) (696.3 M / 1.7 G bytes)
2026-05-12 21:02:31,903 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0009.json 527 bytes (8 / 19 files) (696.3 M / 1.7 G bytes)
2026-05-12 21:02:31,968 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0163.fits 12.1 M bytes (9 / 19 files) (696.3 M / 1.7 G bytes)
2026-05-12 21:02:32,200 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf 13.8 K bytes (10 / 19 files) (708.4 M / 1.7 G bytes)
2026-05-12 21:02:32,257 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf 4.9 K bytes (11 / 19 files) (708.4 M / 1.7 G bytes)
2026-05-12 21:02:32,321 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf 5.0 M bytes (12 / 19 files) (708.4 M / 1.7 G bytes)
2026-05-12 21:02:32,516 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json 7.4 M bytes (13 / 19 files) (713.4 M / 1.7 G bytes)
2026-05-12 21:02:32,749 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf 7.6 K bytes (14 / 19 files) (720.8 M / 1.7 G bytes)
2026-05-12 21:02:32,812 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0010.fits 1.3 M bytes (15 / 19 files) (720.8 M / 1.7 G bytes)
2026-05-12 21:02:32,952 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0015.fits 25.9 K bytes (16 / 19 files) (722.1 M / 1.7 G bytes)
2026-05-12 21:02:33,012 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0222.fits 1.0 G bytes (17 / 19 files) (722.2 M / 1.7 G bytes)
2026-05-12 21:02:39,196 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0004.asdf 16.5 K bytes (18 / 19 files) (1.7 G / 1.7 G bytes)
2026-05-12 21:02:39,252 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf 3.4 K bytes (19 / 19 files) (1.7 G / 1.7 G bytes)
2026-05-12 21:02:39,306 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0004.fits'.
2026-05-12 21:02:39,307 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0033.fits'.
2026-05-12 21:02:39,308 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_barshadow_0006.fits'.
2026-05-12 21:02:39,308 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:02:39,309 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:02:39,310 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:02:39,310 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:02:39,311 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:02:39,312 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:02:39,312 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:02:39,313 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0009.json'.
2026-05-12 21:02:39,313 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0163.fits'.
2026-05-12 21:02:39,314 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:02:39,315 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:02:39,315 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:02:39,315 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:02:39,316 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:02:39,317 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:02:39,317 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:02:39,318 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:02:39,318 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:02:39,319 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:02:39,319 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json'.
2026-05-12 21:02:39,320 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:02:39,321 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:02:39,321 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0010.fits'.
2026-05-12 21:02:39,321 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0015.fits'.
2026-05-12 21:02:39,322 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:02:39,323 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:02:39,323 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0222.fits'.
2026-05-12 21:02:39,324 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:02:39,324 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:02:39,325 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:02:39,326 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0004.asdf'.
2026-05-12 21:02:39,326 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:02:39,327 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:02:39,328 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw02750002001_07101_00001_nrs1
2026-05-12 21:02:39,328 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw02750002001_07101_00001_nrs1_rate.fits ...
2026-05-12 21:02:39,581 - stpipe.step - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:02:39,809 - jwst.assign_wcs.nirspec - INFO - Retrieving open MSA slitlets for msa_metadata_id = 327 and dither_index = 1
2026-05-12 21:02:39,829 - jwst.assign_wcs.nirspec - INFO - Slitlet 2 is background only; assigned source_id=2
2026-05-12 21:02:39,835 - jwst.assign_wcs.nirspec - INFO - Slitlet 4 is background only; assigned source_id=4
2026-05-12 21:02:39,839 - jwst.assign_wcs.nirspec - INFO - Slitlet 6 is background only; assigned source_id=6
2026-05-12 21:02:39,840 - jwst.assign_wcs.nirspec - INFO - Slitlet 7 is background only; assigned source_id=7
2026-05-12 21:02:39,841 - jwst.assign_wcs.nirspec - INFO - Slitlet 8 is background only; assigned source_id=8
2026-05-12 21:02:39,841 - jwst.assign_wcs.nirspec - INFO - Slitlet 9 is background only; assigned source_id=9
2026-05-12 21:02:39,845 - jwst.assign_wcs.nirspec - INFO - Slitlet 11 is background only; assigned source_id=11
2026-05-12 21:02:39,846 - jwst.assign_wcs.nirspec - INFO - Slitlet 12 is background only; assigned source_id=12
2026-05-12 21:02:39,847 - jwst.assign_wcs.nirspec - INFO - Slitlet 13 is background only; assigned source_id=13
2026-05-12 21:02:39,847 - jwst.assign_wcs.nirspec - INFO - Slitlet 14 is background only; assigned source_id=14
2026-05-12 21:02:39,848 - jwst.assign_wcs.nirspec - INFO - Slitlet 15 is background only; assigned source_id=15
2026-05-12 21:02:39,852 - jwst.assign_wcs.nirspec - INFO - Slitlet 17 is background only; assigned source_id=17
2026-05-12 21:02:39,853 - jwst.assign_wcs.nirspec - INFO - Slitlet 18 is background only; assigned source_id=18
2026-05-12 21:02:39,853 - jwst.assign_wcs.nirspec - INFO - Slitlet 19 is background only; assigned source_id=19
2026-05-12 21:02:39,854 - jwst.assign_wcs.nirspec - INFO - Slitlet 20 is background only; assigned source_id=20
2026-05-12 21:02:39,855 - jwst.assign_wcs.nirspec - INFO - Slitlet 21 is background only; assigned source_id=21
2026-05-12 21:02:39,856 - jwst.assign_wcs.nirspec - INFO - Slitlet 22 is background only; assigned source_id=22
2026-05-12 21:02:39,859 - jwst.assign_wcs.nirspec - INFO - Slitlet 24 is background only; assigned source_id=24
2026-05-12 21:02:39,860 - jwst.assign_wcs.nirspec - INFO - Slitlet 25 is background only; assigned source_id=25
2026-05-12 21:02:39,864 - jwst.assign_wcs.nirspec - INFO - Slitlet 27 is background only; assigned source_id=27
2026-05-12 21:02:39,870 - jwst.assign_wcs.nirspec - INFO - Slitlet 30 is background only; assigned source_id=30
2026-05-12 21:02:39,873 - jwst.assign_wcs.nirspec - INFO - Slitlet 32 is background only; assigned source_id=32
2026-05-12 21:02:39,876 - jwst.assign_wcs.nirspec - INFO - Slitlet 34 is background only; assigned source_id=34
2026-05-12 21:02:39,885 - jwst.assign_wcs.nirspec - INFO - Slitlet 38 is background only; assigned source_id=38
2026-05-12 21:02:39,886 - jwst.assign_wcs.nirspec - INFO - Slitlet 39 is background only; assigned source_id=39
2026-05-12 21:02:39,887 - jwst.assign_wcs.nirspec - INFO - Slitlet 40 is background only; assigned source_id=40
2026-05-12 21:02:39,888 - jwst.assign_wcs.nirspec - INFO - Slitlet 41 is background only; assigned source_id=41
2026-05-12 21:02:39,889 - jwst.assign_wcs.nirspec - INFO - Slitlet 42 is background only; assigned source_id=42
2026-05-12 21:02:39,889 - jwst.assign_wcs.nirspec - INFO - Slitlet 43 is background only; assigned source_id=43
2026-05-12 21:02:39,893 - jwst.assign_wcs.nirspec - INFO - Slitlet 45 is background only; assigned source_id=45
2026-05-12 21:02:39,894 - jwst.assign_wcs.nirspec - INFO - Slitlet 46 is background only; assigned source_id=46
2026-05-12 21:02:39,900 - jwst.assign_wcs.nirspec - INFO - Slitlet 49 is background only; assigned source_id=49
2026-05-12 21:02:39,903 - jwst.assign_wcs.nirspec - INFO - Slitlet 51 is background only; assigned source_id=51
2026-05-12 21:02:39,909 - jwst.assign_wcs.nirspec - INFO - Slitlet 54 is background only; assigned source_id=54
2026-05-12 21:02:39,910 - jwst.assign_wcs.nirspec - INFO - Slitlet 55 is background only; assigned source_id=55
2026-05-12 21:02:39,913 - jwst.assign_wcs.nirspec - INFO - Slitlet 57 is background only; assigned source_id=57
2026-05-12 21:02:39,914 - jwst.assign_wcs.nirspec - INFO - Slitlet 58 is background only; assigned source_id=58
2026-05-12 21:02:39,915 - jwst.assign_wcs.nirspec - INFO - Slitlet 59 is background only; assigned source_id=59
2026-05-12 21:02:39,918 - jwst.assign_wcs.nirspec - INFO - Slitlet 61 is background only; assigned source_id=61
2026-05-12 21:02:39,919 - jwst.assign_wcs.nirspec - INFO - Slitlet 62 is background only; assigned source_id=62
2026-05-12 21:02:39,919 - jwst.assign_wcs.nirspec - INFO - Slitlet 63 is background only; assigned source_id=63
2026-05-12 21:02:39,920 - jwst.assign_wcs.nirspec - INFO - Slitlet 64 is background only; assigned source_id=64
2026-05-12 21:02:39,921 - jwst.assign_wcs.nirspec - INFO - Slitlet 65 is background only; assigned source_id=65
2026-05-12 21:02:39,928 - jwst.assign_wcs.nirspec - INFO - Slitlet 68 is background only; assigned source_id=68
2026-05-12 21:02:39,931 - jwst.assign_wcs.nirspec - INFO - Slitlet 70 is background only; assigned source_id=70
2026-05-12 21:02:39,932 - jwst.assign_wcs.nirspec - INFO - Slitlet 71 is background only; assigned source_id=71
2026-05-12 21:02:39,933 - jwst.assign_wcs.nirspec - INFO - Slitlet 72 is background only; assigned source_id=72
2026-05-12 21:02:39,934 - jwst.assign_wcs.nirspec - INFO - Slitlet 73 is background only; assigned source_id=73
2026-05-12 21:02:39,935 - jwst.assign_wcs.nirspec - INFO - Slitlet 74 is background only; assigned source_id=74
2026-05-12 21:02:39,938 - jwst.assign_wcs.nirspec - INFO - Slitlet 76 is background only; assigned source_id=76
2026-05-12 21:02:39,939 - jwst.assign_wcs.nirspec - INFO - Slitlet 77 is background only; assigned source_id=77
2026-05-12 21:02:39,940 - jwst.assign_wcs.nirspec - INFO - Slitlet 78 is background only; assigned source_id=78
2026-05-12 21:02:39,946 - jwst.assign_wcs.nirspec - INFO - Slitlet 81 is background only; assigned source_id=81
2026-05-12 21:02:39,963 - jwst.assign_wcs.nirspec - INFO - Slitlet 88 is background only; assigned source_id=88
2026-05-12 21:02:39,967 - jwst.assign_wcs.nirspec - INFO - Slitlet 90 is background only; assigned source_id=90
2026-05-12 21:02:39,968 - jwst.assign_wcs.nirspec - INFO - Slitlet 91 is background only; assigned source_id=91
2026-05-12 21:02:39,976 - jwst.assign_wcs.nirspec - INFO - Slitlet 95 is background only; assigned source_id=95
2026-05-12 21:02:39,977 - jwst.assign_wcs.nirspec - INFO - Slitlet 96 is background only; assigned source_id=96
2026-05-12 21:02:39,978 - jwst.assign_wcs.nirspec - INFO - Slitlet 97 is background only; assigned source_id=97
2026-05-12 21:02:39,995 - jwst.assign_wcs.nirspec - INFO - Slitlet 104 is background only; assigned source_id=104
2026-05-12 21:02:39,996 - jwst.assign_wcs.nirspec - INFO - Slitlet 105 is background only; assigned source_id=105
2026-05-12 21:02:40,004 - jwst.assign_wcs.nirspec - INFO - Slitlet 109 is background only; assigned source_id=109
2026-05-12 21:02:40,005 - jwst.assign_wcs.nirspec - INFO - Slitlet 110 is background only; assigned source_id=110
2026-05-12 21:02:40,006 - jwst.assign_wcs.nirspec - INFO - Slitlet 111 is background only; assigned source_id=111
2026-05-12 21:02:40,007 - jwst.assign_wcs.nirspec - INFO - Slitlet 112 is background only; assigned source_id=112
2026-05-12 21:02:40,007 - jwst.assign_wcs.nirspec - INFO - Slitlet 113 is background only; assigned source_id=113
2026-05-12 21:02:40,013 - jwst.assign_wcs.nirspec - INFO - Slitlet 116 is background only; assigned source_id=116
2026-05-12 21:02:40,017 - jwst.assign_wcs.nirspec - INFO - Slitlet 118 is background only; assigned source_id=118
2026-05-12 21:02:40,018 - jwst.assign_wcs.nirspec - INFO - Slitlet 119 is background only; assigned source_id=119
2026-05-12 21:02:40,018 - jwst.assign_wcs.nirspec - INFO - Slitlet 120 is background only; assigned source_id=120
2026-05-12 21:02:40,019 - jwst.assign_wcs.nirspec - INFO - Slitlet 121 is background only; assigned source_id=121
2026-05-12 21:02:40,020 - jwst.assign_wcs.nirspec - INFO - Slitlet 122 is background only; assigned source_id=122
2026-05-12 21:02:40,021 - jwst.assign_wcs.nirspec - INFO - Slitlet 123 is background only; assigned source_id=123
2026-05-12 21:02:40,022 - jwst.assign_wcs.nirspec - INFO - Slitlet 124 is background only; assigned source_id=124
2026-05-12 21:02:40,025 - jwst.assign_wcs.nirspec - INFO - Slitlet 126 is background only; assigned source_id=126
2026-05-12 21:02:40,026 - jwst.assign_wcs.nirspec - INFO - Slitlet 127 is background only; assigned source_id=127
2026-05-12 21:02:40,027 - jwst.assign_wcs.nirspec - INFO - Slitlet 128 is background only; assigned source_id=128
2026-05-12 21:02:40,027 - jwst.assign_wcs.nirspec - INFO - Slitlet 129 is background only; assigned source_id=129
2026-05-12 21:02:40,028 - jwst.assign_wcs.nirspec - INFO - Slitlet 130 is background only; assigned source_id=130
2026-05-12 21:02:40,031 - jwst.assign_wcs.nirspec - INFO - Slitlet 132 is background only; assigned source_id=132
2026-05-12 21:02:40,032 - jwst.assign_wcs.nirspec - INFO - Slitlet 133 is background only; assigned source_id=133
2026-05-12 21:02:40,035 - jwst.assign_wcs.nirspec - INFO - Slitlet 135 is background only; assigned source_id=135
2026-05-12 21:02:40,039 - jwst.assign_wcs.nirspec - INFO - Slitlet 137 is background only; assigned source_id=137
2026-05-12 21:02:40,040 - jwst.assign_wcs.nirspec - INFO - Slitlet 138 is background only; assigned source_id=138
2026-05-12 21:02:40,046 - jwst.assign_wcs.nirspec - INFO - Slitlet 141 is background only; assigned source_id=141
2026-05-12 21:02:40,049 - jwst.assign_wcs.nirspec - INFO - Slitlet 143 is background only; assigned source_id=143
2026-05-12 21:02:40,049 - jwst.assign_wcs.nirspec - INFO - Slitlet 144 is background only; assigned source_id=144
2026-05-12 21:02:40,056 - jwst.assign_wcs.nirspec - INFO - Slitlet 147 is background only; assigned source_id=147
2026-05-12 21:02:40,059 - jwst.assign_wcs.nirspec - INFO - Slitlet 149 is background only; assigned source_id=149
2026-05-12 21:02:40,069 - jwst.assign_wcs.nirspec - INFO - Slitlet 153 is background only; assigned source_id=153
2026-05-12 21:02:40,108 - jwst.assign_wcs.nirspec - INFO - Slitlet 169 is background only; assigned source_id=169
2026-05-12 21:02:40,109 - jwst.assign_wcs.nirspec - INFO - Slitlet 170 is background only; assigned source_id=170
2026-05-12 21:02:40,109 - jwst.assign_wcs.nirspec - INFO - Slitlet 171 is background only; assigned source_id=171
2026-05-12 21:02:40,110 - jwst.assign_wcs.nirspec - INFO - Slitlet 172 is background only; assigned source_id=172
2026-05-12 21:02:40,116 - jwst.assign_wcs.nirspec - INFO - Slitlet 175 is background only; assigned source_id=175
2026-05-12 21:02:40,120 - jwst.assign_wcs.nirspec - INFO - Slitlet 177 is background only; assigned source_id=177
2026-05-12 21:02:40,121 - jwst.assign_wcs.nirspec - INFO - Slitlet 178 is background only; assigned source_id=178
2026-05-12 21:02:40,124 - jwst.assign_wcs.nirspec - INFO - Slitlet 180 is background only; assigned source_id=180
2026-05-12 21:02:40,128 - jwst.assign_wcs.nirspec - INFO - Slitlet 182 is background only; assigned source_id=182
2026-05-12 21:02:40,129 - jwst.assign_wcs.nirspec - INFO - Slitlet 183 is background only; assigned source_id=183
2026-05-12 21:02:40,140 - jwst.assign_wcs.nirspec - INFO - Slitlet 188 is background only; assigned source_id=188
2026-05-12 21:02:40,141 - jwst.assign_wcs.nirspec - INFO - Slitlet 189 is background only; assigned source_id=189
2026-05-12 21:02:40,142 - jwst.assign_wcs.nirspec - INFO - Slitlet 190 is background only; assigned source_id=190
2026-05-12 21:02:40,155 - jwst.assign_wcs.nirspec - INFO - Slitlet 196 is background only; assigned source_id=196
2026-05-12 21:02:40,162 - jwst.assign_wcs.nirspec - INFO - Slitlet 199 is background only; assigned source_id=199
2026-05-12 21:02:40,170 - jwst.assign_wcs.nirspec - INFO - Slitlet 203 is background only; assigned source_id=203
2026-05-12 21:02:40,177 - jwst.assign_wcs.nirspec - INFO - Slitlet 206 is background only; assigned source_id=206
2026-05-12 21:02:40,180 - jwst.assign_wcs.nirspec - INFO - Slitlet 208 is background only; assigned source_id=208
2026-05-12 21:02:40,186 - jwst.assign_wcs.nirspec - INFO - Slitlet 211 is background only; assigned source_id=211
2026-05-12 21:02:40,187 - jwst.assign_wcs.nirspec - INFO - Slitlet 212 is background only; assigned source_id=212
2026-05-12 21:02:40,191 - jwst.assign_wcs.nirspec - INFO - Slitlet 214 is background only; assigned source_id=214
2026-05-12 21:02:40,194 - jwst.assign_wcs.nirspec - INFO - Slitlet 216 is background only; assigned source_id=216
2026-05-12 21:02:40,195 - jwst.assign_wcs.nirspec - INFO - Slitlet 217 is background only; assigned source_id=217
2026-05-12 21:02:40,196 - jwst.assign_wcs.nirspec - INFO - Slitlet 218 is background only; assigned source_id=218
2026-05-12 21:02:40,197 - jwst.assign_wcs.nirspec - INFO - Slitlet 219 is background only; assigned source_id=219
2026-05-12 21:02:40,201 - jwst.assign_wcs.nirspec - INFO - Slitlet 221 is background only; assigned source_id=221
2026-05-12 21:02:40,201 - jwst.assign_wcs.nirspec - INFO - Slitlet 222 is background only; assigned source_id=222
2026-05-12 21:02:40,205 - jwst.assign_wcs.nirspec - INFO - Slitlet 224 is background only; assigned source_id=224
2026-05-12 21:02:40,208 - jwst.assign_wcs.nirspec - INFO - Slitlet 226 is background only; assigned source_id=226
2026-05-12 21:02:40,209 - jwst.assign_wcs.nirspec - INFO - Slitlet 227 is background only; assigned source_id=227
2026-05-12 21:02:40,212 - jwst.assign_wcs.nirspec - INFO - Slitlet 229 is background only; assigned source_id=229
2026-05-12 21:02:40,213 - jwst.assign_wcs.nirspec - INFO - Slitlet 230 is background only; assigned source_id=230
2026-05-12 21:02:40,215 - jwst.assign_wcs.nirspec - INFO - Slitlet 231 is background only; assigned source_id=231
2026-05-12 21:02:40,218 - jwst.assign_wcs.nirspec - INFO - Slitlet 233 is background only; assigned source_id=233
2026-05-12 21:02:40,219 - jwst.assign_wcs.nirspec - INFO - Slitlet 234 is background only; assigned source_id=234
2026-05-12 21:02:40,235 - jwst.assign_wcs.nirspec - INFO - Slitlet 241 is background only; assigned source_id=241
2026-05-12 21:02:40,237 - jwst.assign_wcs.nirspec - INFO - Slitlet 242 is background only; assigned source_id=242
2026-05-12 21:02:40,240 - jwst.assign_wcs.nirspec - INFO - Slitlet 244 is background only; assigned source_id=244
2026-05-12 21:02:40,261 - jwst.assign_wcs.nirspec - INFO - Slitlet 253 is background only; assigned source_id=253
2026-05-12 21:02:40,267 - jwst.assign_wcs.nirspec - INFO - Slitlet 256 is background only; assigned source_id=256
2026-05-12 21:02:40,271 - jwst.assign_wcs.nirspec - INFO - Slitlet 258 is background only; assigned source_id=258
2026-05-12 21:02:40,274 - jwst.assign_wcs.nirspec - INFO - Slitlet 260 is background only; assigned source_id=260
2026-05-12 21:02:40,275 - jwst.assign_wcs.nirspec - INFO - Slitlet 261 is background only; assigned source_id=261
2026-05-12 21:02:40,278 - jwst.assign_wcs.nirspec - INFO - Slitlet 263 is background only; assigned source_id=263
2026-05-12 21:02:40,282 - jwst.assign_wcs.nirspec - INFO - Slitlet 265 is background only; assigned source_id=265
2026-05-12 21:02:40,285 - jwst.assign_wcs.nirspec - INFO - Slitlet 267 is background only; assigned source_id=267
2026-05-12 21:02:40,291 - jwst.assign_wcs.nirspec - INFO - Slitlet 270 is background only; assigned source_id=270
2026-05-12 21:02:40,303 - jwst.assign_wcs.nirspec - INFO - Slitlet 275 is background only; assigned source_id=275
2026-05-12 21:02:40,303 - jwst.assign_wcs.nirspec - INFO - Slitlet 276 is background only; assigned source_id=276
2026-05-12 21:02:40,304 - jwst.assign_wcs.nirspec - INFO - Slitlet 277 is background only; assigned source_id=277
2026-05-12 21:02:40,316 - jwst.assign_wcs.nirspec - INFO - Slitlet 282 is background only; assigned source_id=282
2026-05-12 21:02:40,319 - jwst.assign_wcs.nirspec - INFO - Slitlet 284 is background only; assigned source_id=284
2026-05-12 21:02:40,320 - jwst.assign_wcs.nirspec - INFO - Slitlet 285 is background only; assigned source_id=285
2026-05-12 21:02:40,329 - jwst.assign_wcs.nirspec - INFO - Slitlet 289 is background only; assigned source_id=289
2026-05-12 21:02:40,332 - jwst.assign_wcs.nirspec - INFO - Slitlet 291 is background only; assigned source_id=291
2026-05-12 21:02:40,335 - jwst.assign_wcs.nirspec - INFO - Slitlet 293 is background only; assigned source_id=293
2026-05-12 21:02:40,339 - jwst.assign_wcs.nirspec - INFO - Slitlet 295 is background only; assigned source_id=295
2026-05-12 21:02:40,340 - jwst.assign_wcs.nirspec - INFO - Slitlet 296 is background only; assigned source_id=296
2026-05-12 21:02:40,340 - jwst.assign_wcs.nirspec - INFO - Slitlet 297 is background only; assigned source_id=297
2026-05-12 21:02:40,344 - jwst.assign_wcs.nirspec - INFO - Slitlet 299 is background only; assigned source_id=299
2026-05-12 21:02:40,350 - jwst.assign_wcs.nirspec - INFO - Slitlet 302 is background only; assigned source_id=302
2026-05-12 21:02:40,351 - jwst.assign_wcs.nirspec - INFO - Slitlet 303 is background only; assigned source_id=303
2026-05-12 21:02:40,354 - jwst.assign_wcs.nirspec - INFO - Slitlet 305 is background only; assigned source_id=305
2026-05-12 21:02:40,355 - jwst.assign_wcs.nirspec - INFO - Slitlet 306 is background only; assigned source_id=306
2026-05-12 21:02:40,355 - jwst.assign_wcs.nirspec - INFO - Slitlet 307 is background only; assigned source_id=307
2026-05-12 21:02:40,356 - jwst.assign_wcs.nirspec - INFO - Slitlet 308 is background only; assigned source_id=308
2026-05-12 21:02:40,357 - jwst.assign_wcs.nirspec - INFO - Slitlet 309 is background only; assigned source_id=309
2026-05-12 21:02:40,358 - jwst.assign_wcs.nirspec - INFO - Slitlet 310 is background only; assigned source_id=310
2026-05-12 21:02:40,359 - jwst.assign_wcs.nirspec - INFO - Slitlet 311 is background only; assigned source_id=311
2026-05-12 21:02:40,360 - jwst.assign_wcs.nirspec - INFO - Slitlet 312 is background only; assigned source_id=312
2026-05-12 21:02:40,360 - jwst.assign_wcs.nirspec - INFO - Slitlet 313 is background only; assigned source_id=313
2026-05-12 21:02:40,362 - jwst.assign_wcs.nirspec - INFO - Slitlet 314 is background only; assigned source_id=314
2026-05-12 21:02:40,363 - jwst.assign_wcs.nirspec - INFO - Slitlet 315 is background only; assigned source_id=315
2026-05-12 21:02:40,363 - jwst.assign_wcs.nirspec - INFO - Slitlet 316 is background only; assigned source_id=316
2026-05-12 21:02:40,367 - jwst.assign_wcs.nirspec - INFO - Slitlet 318 is background only; assigned source_id=318
2026-05-12 21:02:40,368 - jwst.assign_wcs.nirspec - INFO - Slitlet 319 is background only; assigned source_id=319
2026-05-12 21:02:40,369 - jwst.assign_wcs.nirspec - INFO - Slitlet 320 is background only; assigned source_id=320
2026-05-12 21:02:40,373 - jwst.assign_wcs.nirspec - INFO - Slitlet 322 is background only; assigned source_id=322
2026-05-12 21:02:40,373 - jwst.assign_wcs.nirspec - INFO - Slitlet 323 is background only; assigned source_id=323
2026-05-12 21:02:40,374 - jwst.assign_wcs.nirspec - INFO - Slitlet 324 is background only; assigned source_id=324
2026-05-12 21:02:40,378 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A1 with source_id = 106280.
2026-05-12 21:02:40,381 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A2 with source_id = 106281.
2026-05-12 21:02:40,384 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S400A1 with source_id = 106282.
2026-05-12 21:02:40,387 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S1600A1 with source_id = 106283.
2026-05-12 21:02:40,419 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:02:40,420 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:02:40,421 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:02:40,422 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:02:40,708 - jwst.assign_wcs.nirspec - INFO - Removing slit 2 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,734 - jwst.assign_wcs.nirspec - INFO - Removing slit 3 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,759 - jwst.assign_wcs.nirspec - INFO - Removing slit 6 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,785 - jwst.assign_wcs.nirspec - INFO - Removing slit 7 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,811 - jwst.assign_wcs.nirspec - INFO - Removing slit 8 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,837 - jwst.assign_wcs.nirspec - INFO - Removing slit 12 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,862 - jwst.assign_wcs.nirspec - INFO - Removing slit 15 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,888 - jwst.assign_wcs.nirspec - INFO - Removing slit 19 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,914 - jwst.assign_wcs.nirspec - INFO - Removing slit 20 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,940 - jwst.assign_wcs.nirspec - INFO - Removing slit 21 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,966 - jwst.assign_wcs.nirspec - INFO - Removing slit 25 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:40,992 - jwst.assign_wcs.nirspec - INFO - Removing slit 27 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,018 - jwst.assign_wcs.nirspec - INFO - Removing slit 28 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,044 - jwst.assign_wcs.nirspec - INFO - Removing slit 29 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,071 - jwst.assign_wcs.nirspec - INFO - Removing slit 30 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,097 - jwst.assign_wcs.nirspec - INFO - Removing slit 33 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,123 - jwst.assign_wcs.nirspec - INFO - Removing slit 36 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,149 - jwst.assign_wcs.nirspec - INFO - Removing slit 37 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,175 - jwst.assign_wcs.nirspec - INFO - Removing slit 38 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,201 - jwst.assign_wcs.nirspec - INFO - Removing slit 43 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,227 - jwst.assign_wcs.nirspec - INFO - Removing slit 44 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,253 - jwst.assign_wcs.nirspec - INFO - Removing slit 46 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,279 - jwst.assign_wcs.nirspec - INFO - Removing slit 47 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,305 - jwst.assign_wcs.nirspec - INFO - Removing slit 49 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,330 - jwst.assign_wcs.nirspec - INFO - Removing slit 50 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,356 - jwst.assign_wcs.nirspec - INFO - Removing slit 52 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,382 - jwst.assign_wcs.nirspec - INFO - Removing slit 54 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,408 - jwst.assign_wcs.nirspec - INFO - Removing slit 57 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,434 - jwst.assign_wcs.nirspec - INFO - Removing slit 58 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,460 - jwst.assign_wcs.nirspec - INFO - Removing slit 59 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,487 - jwst.assign_wcs.nirspec - INFO - Removing slit 60 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,512 - jwst.assign_wcs.nirspec - INFO - Removing slit 61 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,542 - jwst.assign_wcs.nirspec - INFO - Removing slit 63 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,568 - jwst.assign_wcs.nirspec - INFO - Removing slit 64 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,593 - jwst.assign_wcs.nirspec - INFO - Removing slit 66 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,620 - jwst.assign_wcs.nirspec - INFO - Removing slit 67 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,646 - jwst.assign_wcs.nirspec - INFO - Removing slit 72 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,672 - jwst.assign_wcs.nirspec - INFO - Removing slit 73 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,698 - jwst.assign_wcs.nirspec - INFO - Removing slit 75 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,724 - jwst.assign_wcs.nirspec - INFO - Removing slit 76 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,750 - jwst.assign_wcs.nirspec - INFO - Removing slit 77 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,775 - jwst.assign_wcs.nirspec - INFO - Removing slit 82 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,802 - jwst.assign_wcs.nirspec - INFO - Removing slit 86 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,829 - jwst.assign_wcs.nirspec - INFO - Removing slit 87 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,855 - jwst.assign_wcs.nirspec - INFO - Removing slit 90 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,881 - jwst.assign_wcs.nirspec - INFO - Removing slit 91 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,907 - jwst.assign_wcs.nirspec - INFO - Removing slit 100 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,933 - jwst.assign_wcs.nirspec - INFO - Removing slit 101 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,959 - jwst.assign_wcs.nirspec - INFO - Removing slit 102 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:41,985 - jwst.assign_wcs.nirspec - INFO - Removing slit 103 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,035 - jwst.assign_wcs.nirspec - INFO - Removing slit 112 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,088 - jwst.assign_wcs.nirspec - INFO - Removing slit 116 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,113 - jwst.assign_wcs.nirspec - INFO - Removing slit 117 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,262 - jwst.assign_wcs.nirspec - INFO - Removing slit 125 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,288 - jwst.assign_wcs.nirspec - INFO - Removing slit 126 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,868 - jwst.assign_wcs.nirspec - INFO - Removing slit 4 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,894 - jwst.assign_wcs.nirspec - INFO - Removing slit 5 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,920 - jwst.assign_wcs.nirspec - INFO - Removing slit 9 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,947 - jwst.assign_wcs.nirspec - INFO - Removing slit 10 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,973 - jwst.assign_wcs.nirspec - INFO - Removing slit 11 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:42,999 - jwst.assign_wcs.nirspec - INFO - Removing slit 13 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,025 - jwst.assign_wcs.nirspec - INFO - Removing slit 14 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,051 - jwst.assign_wcs.nirspec - INFO - Removing slit 16 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,079 - jwst.assign_wcs.nirspec - INFO - Removing slit 17 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,105 - jwst.assign_wcs.nirspec - INFO - Removing slit 18 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,131 - jwst.assign_wcs.nirspec - INFO - Removing slit 22 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,158 - jwst.assign_wcs.nirspec - INFO - Removing slit 23 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,184 - jwst.assign_wcs.nirspec - INFO - Removing slit 24 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,210 - jwst.assign_wcs.nirspec - INFO - Removing slit 26 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,236 - jwst.assign_wcs.nirspec - INFO - Removing slit 31 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,263 - jwst.assign_wcs.nirspec - INFO - Removing slit 32 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,290 - jwst.assign_wcs.nirspec - INFO - Removing slit 34 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,315 - jwst.assign_wcs.nirspec - INFO - Removing slit 35 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,343 - jwst.assign_wcs.nirspec - INFO - Removing slit 39 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,369 - jwst.assign_wcs.nirspec - INFO - Removing slit 40 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,395 - jwst.assign_wcs.nirspec - INFO - Removing slit 41 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,421 - jwst.assign_wcs.nirspec - INFO - Removing slit 42 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,447 - jwst.assign_wcs.nirspec - INFO - Removing slit 45 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,473 - jwst.assign_wcs.nirspec - INFO - Removing slit 48 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,499 - jwst.assign_wcs.nirspec - INFO - Removing slit 51 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,525 - jwst.assign_wcs.nirspec - INFO - Removing slit 53 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,551 - jwst.assign_wcs.nirspec - INFO - Removing slit 55 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,577 - jwst.assign_wcs.nirspec - INFO - Removing slit 56 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,603 - jwst.assign_wcs.nirspec - INFO - Removing slit 62 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,629 - jwst.assign_wcs.nirspec - INFO - Removing slit 65 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,655 - jwst.assign_wcs.nirspec - INFO - Removing slit 68 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,681 - jwst.assign_wcs.nirspec - INFO - Removing slit 69 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,707 - jwst.assign_wcs.nirspec - INFO - Removing slit 70 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,732 - jwst.assign_wcs.nirspec - INFO - Removing slit 71 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,758 - jwst.assign_wcs.nirspec - INFO - Removing slit 74 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,784 - jwst.assign_wcs.nirspec - INFO - Removing slit 78 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,811 - jwst.assign_wcs.nirspec - INFO - Removing slit 79 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,836 - jwst.assign_wcs.nirspec - INFO - Removing slit 80 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,862 - jwst.assign_wcs.nirspec - INFO - Removing slit 81 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,889 - jwst.assign_wcs.nirspec - INFO - Removing slit 83 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,915 - jwst.assign_wcs.nirspec - INFO - Removing slit 84 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,941 - jwst.assign_wcs.nirspec - INFO - Removing slit 85 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,967 - jwst.assign_wcs.nirspec - INFO - Removing slit 88 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:43,993 - jwst.assign_wcs.nirspec - INFO - Removing slit 89 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,019 - jwst.assign_wcs.nirspec - INFO - Removing slit 92 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,045 - jwst.assign_wcs.nirspec - INFO - Removing slit 93 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,072 - jwst.assign_wcs.nirspec - INFO - Removing slit 94 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,097 - jwst.assign_wcs.nirspec - INFO - Removing slit 95 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,123 - jwst.assign_wcs.nirspec - INFO - Removing slit 96 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,149 - jwst.assign_wcs.nirspec - INFO - Removing slit 97 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,175 - jwst.assign_wcs.nirspec - INFO - Removing slit 98 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,201 - jwst.assign_wcs.nirspec - INFO - Removing slit 99 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,227 - jwst.assign_wcs.nirspec - INFO - Removing slit 104 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,252 - jwst.assign_wcs.nirspec - INFO - Removing slit 105 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,280 - jwst.assign_wcs.nirspec - INFO - Removing slit 106 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,305 - jwst.assign_wcs.nirspec - INFO - Removing slit 107 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,331 - jwst.assign_wcs.nirspec - INFO - Removing slit 108 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,358 - jwst.assign_wcs.nirspec - INFO - Removing slit 110 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,384 - jwst.assign_wcs.nirspec - INFO - Removing slit 111 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,410 - jwst.assign_wcs.nirspec - INFO - Removing slit 114 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,436 - jwst.assign_wcs.nirspec - INFO - Removing slit 115 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,461 - jwst.assign_wcs.nirspec - INFO - Removing slit 119 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,487 - jwst.assign_wcs.nirspec - INFO - Removing slit 120 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,513 - jwst.assign_wcs.nirspec - INFO - Removing slit 127 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,540 - jwst.assign_wcs.nirspec - INFO - Removing slit 128 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,565 - jwst.assign_wcs.nirspec - INFO - Removing slit 130 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,592 - jwst.assign_wcs.nirspec - INFO - Removing slit 132 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,618 - jwst.assign_wcs.nirspec - INFO - Removing slit 133 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,644 - jwst.assign_wcs.nirspec - INFO - Removing slit 137 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,670 - jwst.assign_wcs.nirspec - INFO - Removing slit 139 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,696 - jwst.assign_wcs.nirspec - INFO - Removing slit 140 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,722 - jwst.assign_wcs.nirspec - INFO - Removing slit 141 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:44,774 - jwst.assign_wcs.nirspec - INFO - Removing slit 146 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:02:49,013 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['109', '113', '118', '121', '122', '123', '124', '129', '131', '134', '135', '136', '138', '142', '143', '144', '145', '147', '148', '149', '150', '151', '152', '153', '154', '155', '156', '157', '158', '159', '160', '161', '162', '163', '164', '165', '166', '167', '168', '169', '170', '171', '172', '173', '174', '175', '176', '177', '178', '179', '180', '181', '182', '183', '184', '185', '186', '187', '188', '189', '190', '191', '192', '193', '194', '195', '196', '197', '198', '199', '200', '201', '202', '203', '204', '205', '206', '207', '208', '209', '210', '211', '212', '213', '214', '215', '216', '217', '218', '219', '220', '221', '222', '223', '224', '225', '226', '227', '228', '229', '230', '231', '232', '233', '234', '235', '236', '237', '238', '239', '240', '241', '242', '243', '244', '245', '246', '247', '248', '249', '250', '251', '252', '253', '254', '255', '256', '257', '258', '259', '260', '261', '262', '263', '264', '265', '266', '267', '268', '269', '270', '271', '272', '273', '274', '275', '276', '277', '278', '279', '280', '281', '282', '283', '284', '285', '286', '287', '288', '289', '290', '291', '292', '293', '294', '295', '296', '297', '298', '299', '300', '301', '302', '303', '304', '305', '306', '307', '308', '309', '310', '311', '312', '313', '314', '315', '316', '317', '318', '319', '320', '321', '322', '323', '324', '325', 'S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:02:49,017 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 200 open slitlets
2026-05-12 21:02:49,042 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:02:49,042 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:02:49,043 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:02:49,045 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:02:49,055 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:02:49,148 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999976426080273
2026-05-12 21:02:49,174 - jwst.assign_wcs.nirspec - INFO - There are 29 open slits in quadrant 1
2026-05-12 21:02:49,582 - jwst.assign_wcs.nirspec - INFO - There are 8 open slits in quadrant 2
2026-05-12 21:02:49,629 - jwst.assign_wcs.nirspec - INFO - There are 76 open slits in quadrant 3
2026-05-12 21:02:50,324 - jwst.assign_wcs.nirspec - INFO - There are 83 open slits in quadrant 4
2026-05-12 21:02:51,104 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:02:51,341 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_msaspec pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None, 'msametafile': 'data/jw02750002001_01_msa.fits'}
2026-05-12 21:03:03,146 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:03:03,151 - CRDS - INFO - Calibration SW Found: jwst 2.0.1 (/home/runner/micromamba/envs/ci-env/lib/python3.11/site-packages/jwst-2.0.1.dist-info)
2026-05-12 21:03:03,230 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:03:03,708 - stpipe.step - INFO - Step badpix_selfcal running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>, [], []).
2026-05-12 21:03:03,709 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:04,141 - stpipe.step - INFO - Step msa_flagging running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:04,298 - jwst.msaflagopen.msaflagopen_step - INFO - Using reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json
2026-05-12 21:03:04,398 - jwst.msaflagopen.msaflag_open - INFO - 24 failed open shutters
2026-05-12 21:03:06,554 - stpipe.step - INFO - Step msa_flagging done
2026-05-12 21:03:07,026 - stpipe.step - INFO - Step clean_flicker_noise running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:07,027 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:07,418 - stpipe.step - INFO - Step imprint_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>, []).
2026-05-12 21:03:07,419 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:07,813 - stpipe.step - INFO - Step bkg_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>, []).
2026-05-12 21:03:07,814 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:08,223 - stpipe.step - INFO - Step extract_2d running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:08,225 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_MSASPEC
2026-05-12 21:03:08,226 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:03:08,226 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 106280
2026-05-12 21:03:08,227 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 106281
2026-05-12 21:03:08,227 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 106282
2026-05-12 21:03:08,228 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 106283
2026-05-12 21:03:08,305 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:03:08,306 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1080 1514
2026-05-12 21:03:08,306 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:03:08,609 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:08,618 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934635143 52.921448169 214.934851146 52.920453937 214.934939098 52.920461317 214.934723117 52.921455552
2026-05-12 21:03:08,619 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.934635143 52.921448169 214.934851146 52.920453937 214.934939098 52.920461317 214.934723117 52.921455552
2026-05-12 21:03:08,665 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:03:08,666 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 888 1324
2026-05-12 21:03:08,666 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:03:08,969 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:08,980 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943822461 52.921162602 214.944038074 52.920159406 214.944126638 52.920166883 214.943911047 52.921170083
2026-05-12 21:03:08,981 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.943822461 52.921162602 214.944038074 52.920159406 214.944126638 52.920166883 214.943911047 52.921170083
2026-05-12 21:03:09,027 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:03:09,028 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1021 1455
2026-05-12 21:03:09,029 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:03:09,327 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:09,336 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938177517 52.919631349 214.938424691 52.918489771 214.938604821 52.918504913 214.938357699 52.919646500
2026-05-12 21:03:09,337 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.938177517 52.919631349 214.938424691 52.918489771 214.938604821 52.918504913 214.938357699 52.919646500
2026-05-12 21:03:09,384 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:03:09,385 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1052 1483
2026-05-12 21:03:09,385 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:03:09,684 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:09,693 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937004984 52.918275753 214.937110596 52.917788923 214.937840331 52.917850204 214.937734809 52.918337049
2026-05-12 21:03:09,695 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.937004984 52.918275753 214.937110596 52.917788923 214.937840331 52.917850204 214.937734809 52.918337049
2026-05-12 21:03:10,042 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:03:10,476 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:10,477 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_MSASPEC
2026-05-12 21:03:10,478 - jwst.srctype.srctype - INFO - source_id=106280, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:10,479 - jwst.srctype.srctype - INFO - source_id=106281, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:10,480 - jwst.srctype.srctype - INFO - source_id=106282, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:10,481 - jwst.srctype.srctype - INFO - source_id=106283, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:10,487 - stpipe.step - INFO - Step srctype done
2026-05-12 21:03:11,498 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:12,783 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf 76.9 K bytes (1 / 1 files) (0 / 76.9 K bytes)
2026-05-12 21:03:12,859 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:03:12,860 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:03:12,861 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:03:12,862 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:03:12,862 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:03:12,869 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:03:13,295 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:13,345 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits 80.6 K bytes (1 / 1 files) (0 / 80.6 K bytes)
2026-05-12 21:03:13,452 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits 72.3 M bytes (1 / 1 files) (0 / 72.3 M bytes)
2026-05-12 21:03:14,100 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:03:14,154 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:03:14,253 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:03:14,394 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:03:14,395 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:03:14,683 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:03:14,972 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:03:15,262 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:03:15,870 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:03:16,304 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:16,333 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits 838.1 K bytes (1 / 1 files) (0 / 838.1 K bytes)
2026-05-12 21:03:16,463 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:03:16,605 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:03:16,613 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:03:16,613 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:03:16,614 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:03:16,681 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:03:16,682 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:03:16,683 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:03:16,750 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:03:16,751 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:03:16,752 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:03:16,820 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:03:16,820 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:03:16,821 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:03:16,904 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:03:17,368 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_rate.fits>,).
2026-05-12 21:03:17,401 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits 95.0 K bytes (1 / 1 files) (0 / 95.0 K bytes)
2026-05-12 21:03:17,495 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits 11.5 K bytes (1 / 1 files) (0 / 11.5 K bytes)
2026-05-12 21:03:17,553 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:03:17,554 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:03:17,555 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:03:17,555 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:03:17,556 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:03:17,557 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:03:17,557 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:03:17,606 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:03:17,607 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:03:17,633 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:03:17,634 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:03:17,661 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:03:17,661 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:03:17,688 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:03:17,689 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:03:17,722 - stpipe.step - INFO - Step photom done
2026-05-12 21:03:18,855 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00001_nrs1_cal.fits>,).
2026-05-12 21:03:18,857 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:19,318 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00001_nrs1_cal.fits>,).
2026-05-12 21:03:19,653 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw02750002001_07101_00001_nrs1_cal.fits
2026-05-12 21:03:20,706 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:03:20,715 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.1055 arcsec.
2026-05-12 21:03:20,717 - stcal.resample.resample - INFO - Output pixel scale: 0.10549825288369899 arcsec.
2026-05-12 21:03:20,717 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:03:20,718 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:03:20,718 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:03:20,719 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:03:20,720 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:20,750 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:20,753 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:03:20,756 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:03:20,759 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:03:20,879 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934679811 52.920431734 214.934900747 52.920431734 214.934900747 52.921448725 214.934679811 52.921448725
2026-05-12 21:03:21,065 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:03:21,074 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:03:21,075 - stcal.resample.resample - INFO - Output pixel scale: 0.10541496710656283 arcsec.
2026-05-12 21:03:21,076 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:03:21,077 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:03:21,077 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:03:21,078 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:03:21,079 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:21,112 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:21,115 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:03:21,118 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:03:21,120 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:03:21,239 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943868454 52.920142060 214.944086887 52.920142060 214.944086887 52.921158431 214.943868454 52.921158431
2026-05-12 21:03:21,417 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:03:21,425 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:03:21,426 - stcal.resample.resample - INFO - Output pixel scale: 0.10531245802095923 arcsec.
2026-05-12 21:03:21,427 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:03:21,428 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:03:21,428 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:03:21,429 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:03:21,430 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:21,462 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:21,466 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:03:21,469 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:03:21,471 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:03:21,593 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938268073 52.918476479 214.938519272 52.918476479 214.938519272 52.919636773 214.938268073 52.919636773
2026-05-12 21:03:22,249 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:03:22,257 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:03:22,259 - stcal.resample.resample - INFO - Output pixel scale: 0.10523124170059472 arcsec.
2026-05-12 21:03:22,260 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:03:22,261 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:03:22,261 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:03:22,262 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:03:22,263 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:22,290 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:03:22,292 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:03:22,293 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:03:22,295 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:03:22,411 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937371443 52.917806504 214.937478288 52.917806504 214.937478288 52.918299236 214.937371443 52.918299236
2026-05-12 21:03:22,710 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00001_nrs1_s2d.fits
2026-05-12 21:03:22,711 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:03:22,904 - jwst.pipeline.calwebb_spec2 - INFO - Extracting 4 fixed slits
2026-05-12 21:03:23,375 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw02750002001_07101_00001_nrs1_s2d.fits>,).
2026-05-12 21:03:23,468 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json 1.3 K bytes (1 / 1 files) (0 / 1.3 K bytes)
2026-05-12 21:03:23,520 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:03:23,544 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits 8.1 M bytes (1 / 1 files) (0 / 8.1 M bytes)
2026-05-12 21:03:23,760 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:03:23,836 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:03:23,839 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:03:23,843 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:03:23,844 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:03:23,845 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:03:23,846 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:03:23,900 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:03:23,904 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:03:23,907 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 218, wavelength 3.44
2026-05-12 21:03:23,908 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:03:23,909 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:03:23,910 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:03:23,962 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:03:23,965 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:03:23,968 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:03:23,969 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:03:23,970 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:03:23,971 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:03:24,022 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:03:24,025 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:03:24,029 - jwst.extract_1d.extract - INFO - Computed source location is 8.85, at pixel 215, wavelength 3.43
2026-05-12 21:03:24,030 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:03:24,030 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.65 pixels
2026-05-12 21:03:24,031 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.85 -> 10.85 (inclusive)
2026-05-12 21:03:24,090 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:03:24,202 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00001_nrs1_x1d.fits
2026-05-12 21:03:24,203 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw02750002001_07101_00001_nrs1
2026-05-12 21:03:24,205 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:03:24,206 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:03:24,832 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00001_nrs1_cal.fits
2026-05-12 21:03:24,833 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:03:24,833 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:03:24,856 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:03:24,869 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:03:24,878 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:03:24,888 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:03:24,911 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:03:24,912 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:03:24,913 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:03:24,914 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:03:24,915 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:03:24,917 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:03:24,917 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:03:24,918 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:03:24,922 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:03:24,923 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:03:24,924 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:03:24,925 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:03:24,926 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:03:24,927 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:03:24,928 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:03:24,930 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:03:24,931 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:03:24,931 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:03:24,932 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:03:24,933 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:03:24,934 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:03:24,935 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:03:24,936 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:03:24,937 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:03:24,938 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:03:24,939 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:03:24,940 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:03:24,940 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:03:24,941 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:03:24,943 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:03:24,944 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:03:24,946 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw02750002001_07101_00002_nrs1_rate.fits
2026-05-12 21:03:25,637 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw02750002001_07101_00002_nrs1_rate.fits',).
2026-05-12 21:03:25,668 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:03:25,699 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw02750002001_07101_00002_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:03:25,705 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0004.fits'.
2026-05-12 21:03:25,706 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0033.fits'.
2026-05-12 21:03:25,706 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_barshadow_0006.fits'.
2026-05-12 21:03:25,707 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:03:25,707 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:03:25,708 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:03:25,709 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:03:25,709 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:03:25,710 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:03:25,710 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:03:25,711 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0009.json'.
2026-05-12 21:03:25,712 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0163.fits'.
2026-05-12 21:03:25,712 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:03:25,713 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:03:25,713 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:03:25,714 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:03:25,715 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:03:25,715 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:03:25,716 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:03:25,716 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:03:25,716 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:03:25,717 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:03:25,718 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json'.
2026-05-12 21:03:25,718 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:03:25,719 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:03:25,719 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0010.fits'.
2026-05-12 21:03:25,720 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0015.fits'.
2026-05-12 21:03:25,721 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:03:25,721 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:03:25,722 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0222.fits'.
2026-05-12 21:03:25,722 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:03:25,723 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:03:25,723 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:03:25,724 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0004.asdf'.
2026-05-12 21:03:25,724 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:03:25,725 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:03:25,726 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw02750002001_07101_00002_nrs1
2026-05-12 21:03:25,727 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw02750002001_07101_00002_nrs1_rate.fits ...
2026-05-12 21:03:26,011 - stpipe.step - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:26,191 - jwst.assign_wcs.nirspec - INFO - Retrieving open MSA slitlets for msa_metadata_id = 327 and dither_index = 2
2026-05-12 21:03:26,210 - jwst.assign_wcs.nirspec - INFO - Slitlet 2 is background only; assigned source_id=2
2026-05-12 21:03:26,216 - jwst.assign_wcs.nirspec - INFO - Slitlet 4 is background only; assigned source_id=4
2026-05-12 21:03:26,219 - jwst.assign_wcs.nirspec - INFO - Slitlet 6 is background only; assigned source_id=6
2026-05-12 21:03:26,220 - jwst.assign_wcs.nirspec - INFO - Slitlet 7 is background only; assigned source_id=7
2026-05-12 21:03:26,221 - jwst.assign_wcs.nirspec - INFO - Slitlet 8 is background only; assigned source_id=8
2026-05-12 21:03:26,222 - jwst.assign_wcs.nirspec - INFO - Slitlet 9 is background only; assigned source_id=9
2026-05-12 21:03:26,226 - jwst.assign_wcs.nirspec - INFO - Slitlet 11 is background only; assigned source_id=11
2026-05-12 21:03:26,227 - jwst.assign_wcs.nirspec - INFO - Slitlet 12 is background only; assigned source_id=12
2026-05-12 21:03:26,228 - jwst.assign_wcs.nirspec - INFO - Slitlet 13 is background only; assigned source_id=13
2026-05-12 21:03:26,229 - jwst.assign_wcs.nirspec - INFO - Slitlet 14 is background only; assigned source_id=14
2026-05-12 21:03:26,230 - jwst.assign_wcs.nirspec - INFO - Slitlet 15 is background only; assigned source_id=15
2026-05-12 21:03:26,234 - jwst.assign_wcs.nirspec - INFO - Slitlet 17 is background only; assigned source_id=17
2026-05-12 21:03:26,234 - jwst.assign_wcs.nirspec - INFO - Slitlet 18 is background only; assigned source_id=18
2026-05-12 21:03:26,235 - jwst.assign_wcs.nirspec - INFO - Slitlet 19 is background only; assigned source_id=19
2026-05-12 21:03:26,236 - jwst.assign_wcs.nirspec - INFO - Slitlet 20 is background only; assigned source_id=20
2026-05-12 21:03:26,237 - jwst.assign_wcs.nirspec - INFO - Slitlet 21 is background only; assigned source_id=21
2026-05-12 21:03:26,238 - jwst.assign_wcs.nirspec - INFO - Slitlet 22 is background only; assigned source_id=22
2026-05-12 21:03:26,241 - jwst.assign_wcs.nirspec - INFO - Slitlet 24 is background only; assigned source_id=24
2026-05-12 21:03:26,242 - jwst.assign_wcs.nirspec - INFO - Slitlet 25 is background only; assigned source_id=25
2026-05-12 21:03:26,245 - jwst.assign_wcs.nirspec - INFO - Slitlet 27 is background only; assigned source_id=27
2026-05-12 21:03:26,251 - jwst.assign_wcs.nirspec - INFO - Slitlet 30 is background only; assigned source_id=30
2026-05-12 21:03:26,255 - jwst.assign_wcs.nirspec - INFO - Slitlet 32 is background only; assigned source_id=32
2026-05-12 21:03:26,259 - jwst.assign_wcs.nirspec - INFO - Slitlet 34 is background only; assigned source_id=34
2026-05-12 21:03:26,267 - jwst.assign_wcs.nirspec - INFO - Slitlet 38 is background only; assigned source_id=38
2026-05-12 21:03:26,269 - jwst.assign_wcs.nirspec - INFO - Slitlet 39 is background only; assigned source_id=39
2026-05-12 21:03:26,270 - jwst.assign_wcs.nirspec - INFO - Slitlet 40 is background only; assigned source_id=40
2026-05-12 21:03:26,271 - jwst.assign_wcs.nirspec - INFO - Slitlet 41 is background only; assigned source_id=41
2026-05-12 21:03:26,272 - jwst.assign_wcs.nirspec - INFO - Slitlet 42 is background only; assigned source_id=42
2026-05-12 21:03:26,273 - jwst.assign_wcs.nirspec - INFO - Slitlet 43 is background only; assigned source_id=43
2026-05-12 21:03:26,276 - jwst.assign_wcs.nirspec - INFO - Slitlet 45 is background only; assigned source_id=45
2026-05-12 21:03:26,277 - jwst.assign_wcs.nirspec - INFO - Slitlet 46 is background only; assigned source_id=46
2026-05-12 21:03:26,283 - jwst.assign_wcs.nirspec - INFO - Slitlet 49 is background only; assigned source_id=49
2026-05-12 21:03:26,287 - jwst.assign_wcs.nirspec - INFO - Slitlet 51 is background only; assigned source_id=51
2026-05-12 21:03:26,293 - jwst.assign_wcs.nirspec - INFO - Slitlet 54 is background only; assigned source_id=54
2026-05-12 21:03:26,294 - jwst.assign_wcs.nirspec - INFO - Slitlet 55 is background only; assigned source_id=55
2026-05-12 21:03:26,298 - jwst.assign_wcs.nirspec - INFO - Slitlet 57 is background only; assigned source_id=57
2026-05-12 21:03:26,299 - jwst.assign_wcs.nirspec - INFO - Slitlet 58 is background only; assigned source_id=58
2026-05-12 21:03:26,299 - jwst.assign_wcs.nirspec - INFO - Slitlet 59 is background only; assigned source_id=59
2026-05-12 21:03:26,303 - jwst.assign_wcs.nirspec - INFO - Slitlet 61 is background only; assigned source_id=61
2026-05-12 21:03:26,303 - jwst.assign_wcs.nirspec - INFO - Slitlet 62 is background only; assigned source_id=62
2026-05-12 21:03:26,304 - jwst.assign_wcs.nirspec - INFO - Slitlet 63 is background only; assigned source_id=63
2026-05-12 21:03:26,305 - jwst.assign_wcs.nirspec - INFO - Slitlet 64 is background only; assigned source_id=64
2026-05-12 21:03:26,306 - jwst.assign_wcs.nirspec - INFO - Slitlet 65 is background only; assigned source_id=65
2026-05-12 21:03:26,313 - jwst.assign_wcs.nirspec - INFO - Slitlet 68 is background only; assigned source_id=68
2026-05-12 21:03:26,316 - jwst.assign_wcs.nirspec - INFO - Slitlet 70 is background only; assigned source_id=70
2026-05-12 21:03:26,317 - jwst.assign_wcs.nirspec - INFO - Slitlet 71 is background only; assigned source_id=71
2026-05-12 21:03:26,318 - jwst.assign_wcs.nirspec - INFO - Slitlet 72 is background only; assigned source_id=72
2026-05-12 21:03:26,319 - jwst.assign_wcs.nirspec - INFO - Slitlet 73 is background only; assigned source_id=73
2026-05-12 21:03:26,320 - jwst.assign_wcs.nirspec - INFO - Slitlet 74 is background only; assigned source_id=74
2026-05-12 21:03:26,324 - jwst.assign_wcs.nirspec - INFO - Slitlet 76 is background only; assigned source_id=76
2026-05-12 21:03:26,324 - jwst.assign_wcs.nirspec - INFO - Slitlet 77 is background only; assigned source_id=77
2026-05-12 21:03:26,325 - jwst.assign_wcs.nirspec - INFO - Slitlet 78 is background only; assigned source_id=78
2026-05-12 21:03:26,332 - jwst.assign_wcs.nirspec - INFO - Slitlet 81 is background only; assigned source_id=81
2026-05-12 21:03:26,348 - jwst.assign_wcs.nirspec - INFO - Slitlet 88 is background only; assigned source_id=88
2026-05-12 21:03:26,351 - jwst.assign_wcs.nirspec - INFO - Slitlet 90 is background only; assigned source_id=90
2026-05-12 21:03:26,352 - jwst.assign_wcs.nirspec - INFO - Slitlet 91 is background only; assigned source_id=91
2026-05-12 21:03:26,361 - jwst.assign_wcs.nirspec - INFO - Slitlet 95 is background only; assigned source_id=95
2026-05-12 21:03:26,362 - jwst.assign_wcs.nirspec - INFO - Slitlet 96 is background only; assigned source_id=96
2026-05-12 21:03:26,363 - jwst.assign_wcs.nirspec - INFO - Slitlet 97 is background only; assigned source_id=97
2026-05-12 21:03:26,380 - jwst.assign_wcs.nirspec - INFO - Slitlet 104 is background only; assigned source_id=104
2026-05-12 21:03:26,381 - jwst.assign_wcs.nirspec - INFO - Slitlet 105 is background only; assigned source_id=105
2026-05-12 21:03:26,389 - jwst.assign_wcs.nirspec - INFO - Slitlet 109 is background only; assigned source_id=109
2026-05-12 21:03:26,390 - jwst.assign_wcs.nirspec - INFO - Slitlet 110 is background only; assigned source_id=110
2026-05-12 21:03:26,391 - jwst.assign_wcs.nirspec - INFO - Slitlet 111 is background only; assigned source_id=111
2026-05-12 21:03:26,392 - jwst.assign_wcs.nirspec - INFO - Slitlet 112 is background only; assigned source_id=112
2026-05-12 21:03:26,393 - jwst.assign_wcs.nirspec - INFO - Slitlet 113 is background only; assigned source_id=113
2026-05-12 21:03:26,398 - jwst.assign_wcs.nirspec - INFO - Slitlet 116 is background only; assigned source_id=116
2026-05-12 21:03:26,402 - jwst.assign_wcs.nirspec - INFO - Slitlet 118 is background only; assigned source_id=118
2026-05-12 21:03:26,403 - jwst.assign_wcs.nirspec - INFO - Slitlet 119 is background only; assigned source_id=119
2026-05-12 21:03:26,404 - jwst.assign_wcs.nirspec - INFO - Slitlet 120 is background only; assigned source_id=120
2026-05-12 21:03:26,405 - jwst.assign_wcs.nirspec - INFO - Slitlet 121 is background only; assigned source_id=121
2026-05-12 21:03:26,406 - jwst.assign_wcs.nirspec - INFO - Slitlet 122 is background only; assigned source_id=122
2026-05-12 21:03:26,407 - jwst.assign_wcs.nirspec - INFO - Slitlet 123 is background only; assigned source_id=123
2026-05-12 21:03:26,408 - jwst.assign_wcs.nirspec - INFO - Slitlet 124 is background only; assigned source_id=124
2026-05-12 21:03:26,411 - jwst.assign_wcs.nirspec - INFO - Slitlet 126 is background only; assigned source_id=126
2026-05-12 21:03:26,413 - jwst.assign_wcs.nirspec - INFO - Slitlet 127 is background only; assigned source_id=127
2026-05-12 21:03:26,413 - jwst.assign_wcs.nirspec - INFO - Slitlet 128 is background only; assigned source_id=128
2026-05-12 21:03:26,414 - jwst.assign_wcs.nirspec - INFO - Slitlet 129 is background only; assigned source_id=129
2026-05-12 21:03:26,415 - jwst.assign_wcs.nirspec - INFO - Slitlet 130 is background only; assigned source_id=130
2026-05-12 21:03:26,418 - jwst.assign_wcs.nirspec - INFO - Slitlet 132 is background only; assigned source_id=132
2026-05-12 21:03:26,419 - jwst.assign_wcs.nirspec - INFO - Slitlet 133 is background only; assigned source_id=133
2026-05-12 21:03:26,423 - jwst.assign_wcs.nirspec - INFO - Slitlet 135 is background only; assigned source_id=135
2026-05-12 21:03:26,426 - jwst.assign_wcs.nirspec - INFO - Slitlet 137 is background only; assigned source_id=137
2026-05-12 21:03:26,427 - jwst.assign_wcs.nirspec - INFO - Slitlet 138 is background only; assigned source_id=138
2026-05-12 21:03:26,433 - jwst.assign_wcs.nirspec - INFO - Slitlet 141 is background only; assigned source_id=141
2026-05-12 21:03:26,436 - jwst.assign_wcs.nirspec - INFO - Slitlet 143 is background only; assigned source_id=143
2026-05-12 21:03:26,437 - jwst.assign_wcs.nirspec - INFO - Slitlet 144 is background only; assigned source_id=144
2026-05-12 21:03:26,438 - jwst.assign_wcs.nirspec - INFO - Slitlet 145 is background only; assigned source_id=145
2026-05-12 21:03:26,441 - jwst.assign_wcs.nirspec - INFO - Slitlet 147 is background only; assigned source_id=147
2026-05-12 21:03:26,444 - jwst.assign_wcs.nirspec - INFO - Slitlet 149 is background only; assigned source_id=149
2026-05-12 21:03:26,454 - jwst.assign_wcs.nirspec - INFO - Slitlet 153 is background only; assigned source_id=153
2026-05-12 21:03:26,494 - jwst.assign_wcs.nirspec - INFO - Slitlet 169 is background only; assigned source_id=169
2026-05-12 21:03:26,494 - jwst.assign_wcs.nirspec - INFO - Slitlet 170 is background only; assigned source_id=170
2026-05-12 21:03:26,495 - jwst.assign_wcs.nirspec - INFO - Slitlet 171 is background only; assigned source_id=171
2026-05-12 21:03:26,496 - jwst.assign_wcs.nirspec - INFO - Slitlet 172 is background only; assigned source_id=172
2026-05-12 21:03:26,499 - jwst.assign_wcs.nirspec - INFO - Slitlet 174 is background only; assigned source_id=174
2026-05-12 21:03:26,501 - jwst.assign_wcs.nirspec - INFO - Slitlet 175 is background only; assigned source_id=175
2026-05-12 21:03:26,504 - jwst.assign_wcs.nirspec - INFO - Slitlet 177 is background only; assigned source_id=177
2026-05-12 21:03:26,505 - jwst.assign_wcs.nirspec - INFO - Slitlet 178 is background only; assigned source_id=178
2026-05-12 21:03:26,508 - jwst.assign_wcs.nirspec - INFO - Slitlet 180 is background only; assigned source_id=180
2026-05-12 21:03:26,512 - jwst.assign_wcs.nirspec - INFO - Slitlet 182 is background only; assigned source_id=182
2026-05-12 21:03:26,513 - jwst.assign_wcs.nirspec - INFO - Slitlet 183 is background only; assigned source_id=183
2026-05-12 21:03:26,524 - jwst.assign_wcs.nirspec - INFO - Slitlet 188 is background only; assigned source_id=188
2026-05-12 21:03:26,525 - jwst.assign_wcs.nirspec - INFO - Slitlet 189 is background only; assigned source_id=189
2026-05-12 21:03:26,526 - jwst.assign_wcs.nirspec - INFO - Slitlet 190 is background only; assigned source_id=190
2026-05-12 21:03:26,540 - jwst.assign_wcs.nirspec - INFO - Slitlet 196 is background only; assigned source_id=196
2026-05-12 21:03:26,546 - jwst.assign_wcs.nirspec - INFO - Slitlet 199 is background only; assigned source_id=199
2026-05-12 21:03:26,555 - jwst.assign_wcs.nirspec - INFO - Slitlet 203 is background only; assigned source_id=203
2026-05-12 21:03:26,561 - jwst.assign_wcs.nirspec - INFO - Slitlet 206 is background only; assigned source_id=206
2026-05-12 21:03:26,564 - jwst.assign_wcs.nirspec - INFO - Slitlet 208 is background only; assigned source_id=208
2026-05-12 21:03:26,570 - jwst.assign_wcs.nirspec - INFO - Slitlet 211 is background only; assigned source_id=211
2026-05-12 21:03:26,571 - jwst.assign_wcs.nirspec - INFO - Slitlet 212 is background only; assigned source_id=212
2026-05-12 21:03:26,574 - jwst.assign_wcs.nirspec - INFO - Slitlet 214 is background only; assigned source_id=214
2026-05-12 21:03:26,577 - jwst.assign_wcs.nirspec - INFO - Slitlet 216 is background only; assigned source_id=216
2026-05-12 21:03:26,578 - jwst.assign_wcs.nirspec - INFO - Slitlet 217 is background only; assigned source_id=217
2026-05-12 21:03:26,579 - jwst.assign_wcs.nirspec - INFO - Slitlet 218 is background only; assigned source_id=218
2026-05-12 21:03:26,580 - jwst.assign_wcs.nirspec - INFO - Slitlet 219 is background only; assigned source_id=219
2026-05-12 21:03:26,583 - jwst.assign_wcs.nirspec - INFO - Slitlet 221 is background only; assigned source_id=221
2026-05-12 21:03:26,584 - jwst.assign_wcs.nirspec - INFO - Slitlet 222 is background only; assigned source_id=222
2026-05-12 21:03:26,587 - jwst.assign_wcs.nirspec - INFO - Slitlet 224 is background only; assigned source_id=224
2026-05-12 21:03:26,590 - jwst.assign_wcs.nirspec - INFO - Slitlet 226 is background only; assigned source_id=226
2026-05-12 21:03:26,591 - jwst.assign_wcs.nirspec - INFO - Slitlet 227 is background only; assigned source_id=227
2026-05-12 21:03:26,595 - jwst.assign_wcs.nirspec - INFO - Slitlet 229 is background only; assigned source_id=229
2026-05-12 21:03:26,595 - jwst.assign_wcs.nirspec - INFO - Slitlet 230 is background only; assigned source_id=230
2026-05-12 21:03:26,596 - jwst.assign_wcs.nirspec - INFO - Slitlet 231 is background only; assigned source_id=231
2026-05-12 21:03:26,599 - jwst.assign_wcs.nirspec - INFO - Slitlet 233 is background only; assigned source_id=233
2026-05-12 21:03:26,600 - jwst.assign_wcs.nirspec - INFO - Slitlet 234 is background only; assigned source_id=234
2026-05-12 21:03:26,609 - jwst.assign_wcs.nirspec - INFO - Slitlet 238 is background only; assigned source_id=238
2026-05-12 21:03:26,616 - jwst.assign_wcs.nirspec - INFO - Slitlet 241 is background only; assigned source_id=241
2026-05-12 21:03:26,616 - jwst.assign_wcs.nirspec - INFO - Slitlet 242 is background only; assigned source_id=242
2026-05-12 21:03:26,620 - jwst.assign_wcs.nirspec - INFO - Slitlet 244 is background only; assigned source_id=244
2026-05-12 21:03:26,642 - jwst.assign_wcs.nirspec - INFO - Slitlet 253 is background only; assigned source_id=253
2026-05-12 21:03:26,648 - jwst.assign_wcs.nirspec - INFO - Slitlet 256 is background only; assigned source_id=256
2026-05-12 21:03:26,651 - jwst.assign_wcs.nirspec - INFO - Slitlet 258 is background only; assigned source_id=258
2026-05-12 21:03:26,655 - jwst.assign_wcs.nirspec - INFO - Slitlet 260 is background only; assigned source_id=260
2026-05-12 21:03:26,656 - jwst.assign_wcs.nirspec - INFO - Slitlet 261 is background only; assigned source_id=261
2026-05-12 21:03:26,660 - jwst.assign_wcs.nirspec - INFO - Slitlet 263 is background only; assigned source_id=263
2026-05-12 21:03:26,663 - jwst.assign_wcs.nirspec - INFO - Slitlet 265 is background only; assigned source_id=265
2026-05-12 21:03:26,667 - jwst.assign_wcs.nirspec - INFO - Slitlet 267 is background only; assigned source_id=267
2026-05-12 21:03:26,673 - jwst.assign_wcs.nirspec - INFO - Slitlet 270 is background only; assigned source_id=270
2026-05-12 21:03:26,684 - jwst.assign_wcs.nirspec - INFO - Slitlet 275 is background only; assigned source_id=275
2026-05-12 21:03:26,685 - jwst.assign_wcs.nirspec - INFO - Slitlet 276 is background only; assigned source_id=276
2026-05-12 21:03:26,686 - jwst.assign_wcs.nirspec - INFO - Slitlet 277 is background only; assigned source_id=277
2026-05-12 21:03:26,697 - jwst.assign_wcs.nirspec - INFO - Slitlet 282 is background only; assigned source_id=282
2026-05-12 21:03:26,701 - jwst.assign_wcs.nirspec - INFO - Slitlet 284 is background only; assigned source_id=284
2026-05-12 21:03:26,701 - jwst.assign_wcs.nirspec - INFO - Slitlet 285 is background only; assigned source_id=285
2026-05-12 21:03:26,710 - jwst.assign_wcs.nirspec - INFO - Slitlet 289 is background only; assigned source_id=289
2026-05-12 21:03:26,714 - jwst.assign_wcs.nirspec - INFO - Slitlet 291 is background only; assigned source_id=291
2026-05-12 21:03:26,717 - jwst.assign_wcs.nirspec - INFO - Slitlet 293 is background only; assigned source_id=293
2026-05-12 21:03:26,720 - jwst.assign_wcs.nirspec - INFO - Slitlet 295 is background only; assigned source_id=295
2026-05-12 21:03:26,721 - jwst.assign_wcs.nirspec - INFO - Slitlet 296 is background only; assigned source_id=296
2026-05-12 21:03:26,722 - jwst.assign_wcs.nirspec - INFO - Slitlet 297 is background only; assigned source_id=297
2026-05-12 21:03:26,725 - jwst.assign_wcs.nirspec - INFO - Slitlet 299 is background only; assigned source_id=299
2026-05-12 21:03:26,732 - jwst.assign_wcs.nirspec - INFO - Slitlet 302 is background only; assigned source_id=302
2026-05-12 21:03:26,733 - jwst.assign_wcs.nirspec - INFO - Slitlet 303 is background only; assigned source_id=303
2026-05-12 21:03:26,736 - jwst.assign_wcs.nirspec - INFO - Slitlet 305 is background only; assigned source_id=305
2026-05-12 21:03:26,737 - jwst.assign_wcs.nirspec - INFO - Slitlet 306 is background only; assigned source_id=306
2026-05-12 21:03:26,738 - jwst.assign_wcs.nirspec - INFO - Slitlet 307 is background only; assigned source_id=307
2026-05-12 21:03:26,739 - jwst.assign_wcs.nirspec - INFO - Slitlet 308 is background only; assigned source_id=308
2026-05-12 21:03:26,740 - jwst.assign_wcs.nirspec - INFO - Slitlet 309 is background only; assigned source_id=309
2026-05-12 21:03:26,741 - jwst.assign_wcs.nirspec - INFO - Slitlet 310 is background only; assigned source_id=310
2026-05-12 21:03:26,742 - jwst.assign_wcs.nirspec - INFO - Slitlet 311 is background only; assigned source_id=311
2026-05-12 21:03:26,743 - jwst.assign_wcs.nirspec - INFO - Slitlet 312 is background only; assigned source_id=312
2026-05-12 21:03:26,743 - jwst.assign_wcs.nirspec - INFO - Slitlet 313 is background only; assigned source_id=313
2026-05-12 21:03:26,744 - jwst.assign_wcs.nirspec - INFO - Slitlet 314 is background only; assigned source_id=314
2026-05-12 21:03:26,745 - jwst.assign_wcs.nirspec - INFO - Slitlet 315 is background only; assigned source_id=315
2026-05-12 21:03:26,746 - jwst.assign_wcs.nirspec - INFO - Slitlet 316 is background only; assigned source_id=316
2026-05-12 21:03:26,750 - jwst.assign_wcs.nirspec - INFO - Slitlet 318 is background only; assigned source_id=318
2026-05-12 21:03:26,751 - jwst.assign_wcs.nirspec - INFO - Slitlet 319 is background only; assigned source_id=319
2026-05-12 21:03:26,752 - jwst.assign_wcs.nirspec - INFO - Slitlet 320 is background only; assigned source_id=320
2026-05-12 21:03:26,755 - jwst.assign_wcs.nirspec - INFO - Slitlet 322 is background only; assigned source_id=322
2026-05-12 21:03:26,756 - jwst.assign_wcs.nirspec - INFO - Slitlet 323 is background only; assigned source_id=323
2026-05-12 21:03:26,757 - jwst.assign_wcs.nirspec - INFO - Slitlet 324 is background only; assigned source_id=324
2026-05-12 21:03:26,760 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A1 with source_id = 106280.
2026-05-12 21:03:26,763 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A2 with source_id = 106281.
2026-05-12 21:03:26,766 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S400A1 with source_id = 106282.
2026-05-12 21:03:26,769 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S1600A1 with source_id = 106283.
2026-05-12 21:03:26,798 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:03:26,799 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:03:26,800 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:03:26,801 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:03:27,080 - jwst.assign_wcs.nirspec - INFO - Removing slit 2 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,105 - jwst.assign_wcs.nirspec - INFO - Removing slit 3 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,131 - jwst.assign_wcs.nirspec - INFO - Removing slit 6 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,158 - jwst.assign_wcs.nirspec - INFO - Removing slit 7 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,183 - jwst.assign_wcs.nirspec - INFO - Removing slit 8 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,209 - jwst.assign_wcs.nirspec - INFO - Removing slit 12 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,235 - jwst.assign_wcs.nirspec - INFO - Removing slit 15 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,262 - jwst.assign_wcs.nirspec - INFO - Removing slit 19 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,288 - jwst.assign_wcs.nirspec - INFO - Removing slit 20 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,315 - jwst.assign_wcs.nirspec - INFO - Removing slit 21 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,341 - jwst.assign_wcs.nirspec - INFO - Removing slit 25 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,367 - jwst.assign_wcs.nirspec - INFO - Removing slit 27 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,393 - jwst.assign_wcs.nirspec - INFO - Removing slit 28 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,420 - jwst.assign_wcs.nirspec - INFO - Removing slit 29 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,446 - jwst.assign_wcs.nirspec - INFO - Removing slit 30 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,472 - jwst.assign_wcs.nirspec - INFO - Removing slit 33 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,499 - jwst.assign_wcs.nirspec - INFO - Removing slit 36 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,525 - jwst.assign_wcs.nirspec - INFO - Removing slit 37 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,553 - jwst.assign_wcs.nirspec - INFO - Removing slit 38 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,580 - jwst.assign_wcs.nirspec - INFO - Removing slit 43 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,607 - jwst.assign_wcs.nirspec - INFO - Removing slit 44 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,634 - jwst.assign_wcs.nirspec - INFO - Removing slit 46 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,661 - jwst.assign_wcs.nirspec - INFO - Removing slit 47 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,688 - jwst.assign_wcs.nirspec - INFO - Removing slit 49 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,714 - jwst.assign_wcs.nirspec - INFO - Removing slit 50 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,741 - jwst.assign_wcs.nirspec - INFO - Removing slit 52 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,767 - jwst.assign_wcs.nirspec - INFO - Removing slit 54 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,794 - jwst.assign_wcs.nirspec - INFO - Removing slit 57 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,820 - jwst.assign_wcs.nirspec - INFO - Removing slit 58 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,847 - jwst.assign_wcs.nirspec - INFO - Removing slit 59 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,873 - jwst.assign_wcs.nirspec - INFO - Removing slit 60 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,899 - jwst.assign_wcs.nirspec - INFO - Removing slit 61 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,925 - jwst.assign_wcs.nirspec - INFO - Removing slit 63 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,952 - jwst.assign_wcs.nirspec - INFO - Removing slit 64 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:27,979 - jwst.assign_wcs.nirspec - INFO - Removing slit 66 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,006 - jwst.assign_wcs.nirspec - INFO - Removing slit 67 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,032 - jwst.assign_wcs.nirspec - INFO - Removing slit 72 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,059 - jwst.assign_wcs.nirspec - INFO - Removing slit 73 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,085 - jwst.assign_wcs.nirspec - INFO - Removing slit 75 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,110 - jwst.assign_wcs.nirspec - INFO - Removing slit 76 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,137 - jwst.assign_wcs.nirspec - INFO - Removing slit 77 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,163 - jwst.assign_wcs.nirspec - INFO - Removing slit 82 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,189 - jwst.assign_wcs.nirspec - INFO - Removing slit 86 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,215 - jwst.assign_wcs.nirspec - INFO - Removing slit 87 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,242 - jwst.assign_wcs.nirspec - INFO - Removing slit 90 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,269 - jwst.assign_wcs.nirspec - INFO - Removing slit 91 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,295 - jwst.assign_wcs.nirspec - INFO - Removing slit 100 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,322 - jwst.assign_wcs.nirspec - INFO - Removing slit 101 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,349 - jwst.assign_wcs.nirspec - INFO - Removing slit 102 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,376 - jwst.assign_wcs.nirspec - INFO - Removing slit 103 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,428 - jwst.assign_wcs.nirspec - INFO - Removing slit 112 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,481 - jwst.assign_wcs.nirspec - INFO - Removing slit 116 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,508 - jwst.assign_wcs.nirspec - INFO - Removing slit 117 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,664 - jwst.assign_wcs.nirspec - INFO - Removing slit 125 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:28,691 - jwst.assign_wcs.nirspec - INFO - Removing slit 126 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,265 - jwst.assign_wcs.nirspec - INFO - Removing slit 4 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,291 - jwst.assign_wcs.nirspec - INFO - Removing slit 5 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,317 - jwst.assign_wcs.nirspec - INFO - Removing slit 9 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,343 - jwst.assign_wcs.nirspec - INFO - Removing slit 10 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,370 - jwst.assign_wcs.nirspec - INFO - Removing slit 11 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,396 - jwst.assign_wcs.nirspec - INFO - Removing slit 13 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,422 - jwst.assign_wcs.nirspec - INFO - Removing slit 14 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,449 - jwst.assign_wcs.nirspec - INFO - Removing slit 16 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,475 - jwst.assign_wcs.nirspec - INFO - Removing slit 17 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,501 - jwst.assign_wcs.nirspec - INFO - Removing slit 18 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,527 - jwst.assign_wcs.nirspec - INFO - Removing slit 22 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,554 - jwst.assign_wcs.nirspec - INFO - Removing slit 23 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,579 - jwst.assign_wcs.nirspec - INFO - Removing slit 24 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,605 - jwst.assign_wcs.nirspec - INFO - Removing slit 26 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,631 - jwst.assign_wcs.nirspec - INFO - Removing slit 31 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,657 - jwst.assign_wcs.nirspec - INFO - Removing slit 32 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,683 - jwst.assign_wcs.nirspec - INFO - Removing slit 34 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,709 - jwst.assign_wcs.nirspec - INFO - Removing slit 35 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,734 - jwst.assign_wcs.nirspec - INFO - Removing slit 39 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,760 - jwst.assign_wcs.nirspec - INFO - Removing slit 40 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,789 - jwst.assign_wcs.nirspec - INFO - Removing slit 41 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,815 - jwst.assign_wcs.nirspec - INFO - Removing slit 42 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,842 - jwst.assign_wcs.nirspec - INFO - Removing slit 45 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,868 - jwst.assign_wcs.nirspec - INFO - Removing slit 48 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,893 - jwst.assign_wcs.nirspec - INFO - Removing slit 51 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,919 - jwst.assign_wcs.nirspec - INFO - Removing slit 53 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,945 - jwst.assign_wcs.nirspec - INFO - Removing slit 55 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,971 - jwst.assign_wcs.nirspec - INFO - Removing slit 56 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:29,998 - jwst.assign_wcs.nirspec - INFO - Removing slit 62 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,029 - jwst.assign_wcs.nirspec - INFO - Removing slit 65 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,056 - jwst.assign_wcs.nirspec - INFO - Removing slit 68 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,082 - jwst.assign_wcs.nirspec - INFO - Removing slit 69 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,109 - jwst.assign_wcs.nirspec - INFO - Removing slit 70 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,136 - jwst.assign_wcs.nirspec - INFO - Removing slit 71 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,163 - jwst.assign_wcs.nirspec - INFO - Removing slit 74 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,189 - jwst.assign_wcs.nirspec - INFO - Removing slit 78 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,217 - jwst.assign_wcs.nirspec - INFO - Removing slit 79 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,244 - jwst.assign_wcs.nirspec - INFO - Removing slit 80 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,271 - jwst.assign_wcs.nirspec - INFO - Removing slit 81 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,298 - jwst.assign_wcs.nirspec - INFO - Removing slit 83 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,327 - jwst.assign_wcs.nirspec - INFO - Removing slit 84 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,354 - jwst.assign_wcs.nirspec - INFO - Removing slit 85 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,382 - jwst.assign_wcs.nirspec - INFO - Removing slit 88 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,409 - jwst.assign_wcs.nirspec - INFO - Removing slit 89 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,436 - jwst.assign_wcs.nirspec - INFO - Removing slit 92 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,464 - jwst.assign_wcs.nirspec - INFO - Removing slit 93 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,491 - jwst.assign_wcs.nirspec - INFO - Removing slit 94 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,518 - jwst.assign_wcs.nirspec - INFO - Removing slit 95 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,544 - jwst.assign_wcs.nirspec - INFO - Removing slit 96 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,570 - jwst.assign_wcs.nirspec - INFO - Removing slit 97 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,597 - jwst.assign_wcs.nirspec - INFO - Removing slit 98 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,624 - jwst.assign_wcs.nirspec - INFO - Removing slit 99 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,650 - jwst.assign_wcs.nirspec - INFO - Removing slit 104 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,676 - jwst.assign_wcs.nirspec - INFO - Removing slit 105 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,703 - jwst.assign_wcs.nirspec - INFO - Removing slit 106 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,730 - jwst.assign_wcs.nirspec - INFO - Removing slit 107 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,756 - jwst.assign_wcs.nirspec - INFO - Removing slit 108 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,782 - jwst.assign_wcs.nirspec - INFO - Removing slit 110 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,810 - jwst.assign_wcs.nirspec - INFO - Removing slit 111 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,837 - jwst.assign_wcs.nirspec - INFO - Removing slit 114 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,863 - jwst.assign_wcs.nirspec - INFO - Removing slit 115 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,889 - jwst.assign_wcs.nirspec - INFO - Removing slit 119 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,916 - jwst.assign_wcs.nirspec - INFO - Removing slit 120 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,942 - jwst.assign_wcs.nirspec - INFO - Removing slit 127 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,968 - jwst.assign_wcs.nirspec - INFO - Removing slit 128 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:30,995 - jwst.assign_wcs.nirspec - INFO - Removing slit 130 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,021 - jwst.assign_wcs.nirspec - INFO - Removing slit 132 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,048 - jwst.assign_wcs.nirspec - INFO - Removing slit 133 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,074 - jwst.assign_wcs.nirspec - INFO - Removing slit 137 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,101 - jwst.assign_wcs.nirspec - INFO - Removing slit 139 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,128 - jwst.assign_wcs.nirspec - INFO - Removing slit 140 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,154 - jwst.assign_wcs.nirspec - INFO - Removing slit 141 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:31,207 - jwst.assign_wcs.nirspec - INFO - Removing slit 146 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:03:35,493 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['109', '113', '118', '121', '122', '123', '124', '129', '131', '134', '135', '136', '138', '142', '143', '144', '145', '147', '148', '149', '150', '151', '152', '153', '154', '155', '156', '157', '158', '159', '160', '161', '162', '163', '164', '165', '166', '167', '168', '169', '170', '171', '172', '173', '174', '175', '176', '177', '178', '179', '180', '181', '182', '183', '184', '185', '186', '187', '188', '189', '190', '191', '192', '193', '194', '195', '196', '197', '198', '199', '200', '201', '202', '203', '204', '205', '206', '207', '208', '209', '210', '211', '212', '213', '214', '215', '216', '217', '218', '219', '220', '221', '222', '223', '224', '225', '226', '227', '228', '229', '230', '231', '232', '233', '234', '235', '236', '237', '238', '239', '240', '241', '242', '243', '244', '245', '246', '247', '248', '249', '250', '251', '252', '253', '254', '255', '256', '257', '258', '259', '260', '261', '262', '263', '264', '265', '266', '267', '268', '269', '270', '271', '272', '273', '274', '275', '276', '277', '278', '279', '280', '281', '282', '283', '284', '285', '286', '287', '288', '289', '290', '291', '292', '293', '294', '295', '296', '297', '298', '299', '300', '301', '302', '303', '304', '305', '306', '307', '308', '309', '310', '311', '312', '313', '314', '315', '316', '317', '318', '319', '320', '321', '322', '323', '324', '325', 'S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:03:35,496 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 200 open slitlets
2026-05-12 21:03:35,520 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:03:35,521 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:03:35,522 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:03:35,523 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:03:35,533 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:03:35,628 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999976212266701
2026-05-12 21:03:35,656 - jwst.assign_wcs.nirspec - INFO - There are 29 open slits in quadrant 1
2026-05-12 21:03:36,162 - jwst.assign_wcs.nirspec - INFO - There are 8 open slits in quadrant 2
2026-05-12 21:03:36,211 - jwst.assign_wcs.nirspec - INFO - There are 76 open slits in quadrant 3
2026-05-12 21:03:37,006 - jwst.assign_wcs.nirspec - INFO - There are 83 open slits in quadrant 4
2026-05-12 21:03:37,886 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:03:38,117 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_msaspec pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None, 'msametafile': 'data/jw02750002001_01_msa.fits'}
2026-05-12 21:03:49,215 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:03:49,226 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:03:49,879 - stpipe.step - INFO - Step badpix_selfcal running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>, [], []).
2026-05-12 21:03:49,881 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:50,394 - stpipe.step - INFO - Step msa_flagging running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:50,400 - jwst.msaflagopen.msaflagopen_step - INFO - Using reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json
2026-05-12 21:03:50,496 - jwst.msaflagopen.msaflag_open - INFO - 24 failed open shutters
2026-05-12 21:03:52,529 - stpipe.step - INFO - Step msa_flagging done
2026-05-12 21:03:53,102 - stpipe.step - INFO - Step clean_flicker_noise running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:53,103 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:53,597 - stpipe.step - INFO - Step imprint_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>, []).
2026-05-12 21:03:53,598 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:54,111 - stpipe.step - INFO - Step bkg_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>, []).
2026-05-12 21:03:54,113 - stpipe.step - INFO - Step skipped.
2026-05-12 21:03:54,622 - stpipe.step - INFO - Step extract_2d running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:54,623 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_MSASPEC
2026-05-12 21:03:54,624 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:03:54,625 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 106280
2026-05-12 21:03:54,626 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 106281
2026-05-12 21:03:54,627 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 106282
2026-05-12 21:03:54,627 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 106283
2026-05-12 21:03:54,696 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:03:54,697 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1080 1514
2026-05-12 21:03:54,698 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:03:54,990 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:54,998 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934667903 52.921302602 214.934883904 52.920308370 214.934971855 52.920315751 214.934755877 52.921309986
2026-05-12 21:03:55,000 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.934667903 52.921302602 214.934883904 52.920308370 214.934971855 52.920315751 214.934755877 52.921309986
2026-05-12 21:03:55,045 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:03:55,045 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 888 1324
2026-05-12 21:03:55,046 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:03:55,357 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:55,367 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943855189 52.921017031 214.944070800 52.920013835 214.944159364 52.920021312 214.943943775 52.921024512
2026-05-12 21:03:55,368 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.943855189 52.921017031 214.944070800 52.920013835 214.944159364 52.920021312 214.943943775 52.921024512
2026-05-12 21:03:55,417 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:03:55,418 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1021 1455
2026-05-12 21:03:55,418 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:03:55,717 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:55,726 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938210263 52.919485781 214.938457434 52.918344203 214.938637563 52.918359344 214.938390444 52.919500931
2026-05-12 21:03:55,727 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.938210263 52.919485781 214.938457434 52.918344203 214.938637563 52.918359344 214.938390444 52.919500931
2026-05-12 21:03:55,772 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:03:55,773 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1052 1483
2026-05-12 21:03:55,774 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:03:56,066 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:03:56,075 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937037731 52.918130185 214.937143343 52.917643355 214.937873075 52.917704636 214.937767554 52.918191481
2026-05-12 21:03:56,077 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.937037731 52.918130185 214.937143343 52.917643355 214.937873075 52.917704636 214.937767554 52.918191481
2026-05-12 21:03:56,421 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:03:56,958 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:56,959 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_MSASPEC
2026-05-12 21:03:56,960 - jwst.srctype.srctype - INFO - source_id=106280, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:56,962 - jwst.srctype.srctype - INFO - source_id=106281, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:56,963 - jwst.srctype.srctype - INFO - source_id=106282, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:56,963 - jwst.srctype.srctype - INFO - source_id=106283, stellarity=0.0000, type=EXTENDED
2026-05-12 21:03:56,970 - stpipe.step - INFO - Step srctype done
2026-05-12 21:03:58,062 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:58,092 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:03:58,093 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:03:58,094 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:03:58,095 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:03:58,096 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:03:58,102 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:03:58,624 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:03:58,712 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:03:58,762 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:03:58,858 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:03:58,998 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:03:59,000 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:03:59,283 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:03:59,565 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:03:59,849 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:04:00,454 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:04:01,005 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:04:01,029 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:04:01,168 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:04:01,176 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:04:01,177 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:01,177 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:04:01,245 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:04:01,245 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:01,246 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:04:01,313 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:04:01,314 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:01,315 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:04:01,387 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:04:01,388 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:01,388 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:04:01,462 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:04:01,989 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_rate.fits>,).
2026-05-12 21:04:02,036 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:04:02,037 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:04:02,038 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:04:02,038 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:04:02,039 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:04:02,039 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:04:02,040 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:04:02,087 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:04:02,088 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:04:02,115 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:04:02,116 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:04:02,143 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:04:02,144 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:04:02,170 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:04:02,171 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:04:02,205 - stpipe.step - INFO - Step photom done
2026-05-12 21:04:03,442 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00002_nrs1_cal.fits>,).
2026-05-12 21:04:03,444 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:04,004 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00002_nrs1_cal.fits>,).
2026-05-12 21:04:04,328 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw02750002001_07101_00002_nrs1_cal.fits
2026-05-12 21:04:05,378 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:05,386 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.1055 arcsec.
2026-05-12 21:04:05,388 - stcal.resample.resample - INFO - Output pixel scale: 0.10549825055878097 arcsec.
2026-05-12 21:04:05,388 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:05,389 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:05,390 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:05,391 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:05,391 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:05,423 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:05,426 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:05,429 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:05,431 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:05,561 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934712571 52.920286167 214.934933504 52.920286167 214.934933504 52.921303158 214.934712571 52.921303158
2026-05-12 21:04:05,739 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:05,747 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:04:05,749 - stcal.resample.resample - INFO - Output pixel scale: 0.1054149648113932 arcsec.
2026-05-12 21:04:05,750 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:05,750 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:05,751 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:05,752 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:05,753 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:05,786 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:05,789 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:05,792 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:05,795 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:05,917 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943901182 52.919996489 214.944119613 52.919996489 214.944119613 52.921012860 214.943901182 52.921012860
2026-05-12 21:04:06,098 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:06,107 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:04:06,108 - stcal.resample.resample - INFO - Output pixel scale: 0.10531245573910189 arcsec.
2026-05-12 21:04:06,109 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:06,109 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:06,110 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:06,110 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:06,112 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:06,145 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:06,148 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:06,151 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:06,154 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:06,277 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938300818 52.918330910 214.938552015 52.918330910 214.938552015 52.919491205 214.938300818 52.919491205
2026-05-12 21:04:07,069 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:07,077 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:04:07,079 - stcal.resample.resample - INFO - Output pixel scale: 0.10523123939022057 arcsec.
2026-05-12 21:04:07,079 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:07,080 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:07,080 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:07,081 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:07,083 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:07,109 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:07,111 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:07,113 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:07,114 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:07,231 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937404189 52.917660937 214.937511034 52.917660937 214.937511034 52.918153668 214.937404189 52.918153668
2026-05-12 21:04:07,533 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00002_nrs1_s2d.fits
2026-05-12 21:04:07,534 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:04:07,727 - jwst.pipeline.calwebb_spec2 - INFO - Extracting 4 fixed slits
2026-05-12 21:04:08,299 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw02750002001_07101_00002_nrs1_s2d.fits>,).
2026-05-12 21:04:08,326 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:04:08,350 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:04:08,421 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:04:08,425 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:08,428 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:04:08,429 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:04:08,430 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:04:08,431 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:04:08,484 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:04:08,487 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:08,491 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 218, wavelength 3.44
2026-05-12 21:04:08,492 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:04:08,493 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:04:08,494 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:04:08,547 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:04:08,550 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:08,554 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:04:08,555 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:04:08,555 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:04:08,557 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:04:08,610 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:04:08,613 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:08,617 - jwst.extract_1d.extract - INFO - Computed source location is 8.85, at pixel 215, wavelength 3.43
2026-05-12 21:04:08,618 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:04:08,618 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.65 pixels
2026-05-12 21:04:08,619 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.85 -> 10.85 (inclusive)
2026-05-12 21:04:08,680 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:04:08,795 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00002_nrs1_x1d.fits
2026-05-12 21:04:08,797 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw02750002001_07101_00002_nrs1
2026-05-12 21:04:08,799 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:04:08,799 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:04:09,402 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00002_nrs1_cal.fits
2026-05-12 21:04:09,402 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:04:09,403 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:04:09,426 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:04:09,439 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:04:09,448 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:04:09,458 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:04:09,480 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:04:09,481 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:04:09,482 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:04:09,483 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:04:09,484 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:04:09,485 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:04:09,486 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:04:09,487 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:04:09,491 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:04:09,493 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:04:09,494 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:04:09,494 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:04:09,496 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:04:09,496 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:04:09,498 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:04:09,499 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:04:09,500 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:04:09,501 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:04:09,501 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:04:09,502 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:04:09,504 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:04:09,505 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:04:09,506 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:04:09,507 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:04:09,507 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:04:09,509 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:04:09,510 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:04:09,511 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:04:09,512 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:04:09,513 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:04:09,515 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:04:09,516 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw02750002001_07101_00003_nrs1_rate.fits
2026-05-12 21:04:10,351 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw02750002001_07101_00003_nrs1_rate.fits',).
2026-05-12 21:04:10,382 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:04:10,415 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw02750002001_07101_00003_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:04:10,420 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0004.fits'.
2026-05-12 21:04:10,421 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0033.fits'.
2026-05-12 21:04:10,422 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_barshadow_0006.fits'.
2026-05-12 21:04:10,422 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:04:10,423 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:04:10,424 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:04:10,424 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:04:10,425 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:04:10,425 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:04:10,426 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:04:10,426 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0009.json'.
2026-05-12 21:04:10,427 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0163.fits'.
2026-05-12 21:04:10,428 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:04:10,428 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:04:10,429 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:04:10,429 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:04:10,430 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:04:10,430 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:04:10,431 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:04:10,431 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:04:10,432 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:04:10,433 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:04:10,433 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json'.
2026-05-12 21:04:10,434 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:04:10,434 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:04:10,435 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0010.fits'.
2026-05-12 21:04:10,436 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0015.fits'.
2026-05-12 21:04:10,436 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:04:10,437 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:04:10,437 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0222.fits'.
2026-05-12 21:04:10,438 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:04:10,438 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:04:10,439 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:04:10,439 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0004.asdf'.
2026-05-12 21:04:10,440 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:04:10,441 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:04:10,441 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw02750002001_07101_00003_nrs1
2026-05-12 21:04:10,442 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw02750002001_07101_00003_nrs1_rate.fits ...
2026-05-12 21:04:10,719 - stpipe.step - INFO - Step assign_wcs running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:10,900 - jwst.assign_wcs.nirspec - INFO - Retrieving open MSA slitlets for msa_metadata_id = 327 and dither_index = 3
2026-05-12 21:04:10,919 - jwst.assign_wcs.nirspec - INFO - Slitlet 2 is background only; assigned source_id=2
2026-05-12 21:04:10,925 - jwst.assign_wcs.nirspec - INFO - Slitlet 4 is background only; assigned source_id=4
2026-05-12 21:04:10,929 - jwst.assign_wcs.nirspec - INFO - Slitlet 6 is background only; assigned source_id=6
2026-05-12 21:04:10,930 - jwst.assign_wcs.nirspec - INFO - Slitlet 7 is background only; assigned source_id=7
2026-05-12 21:04:10,931 - jwst.assign_wcs.nirspec - INFO - Slitlet 8 is background only; assigned source_id=8
2026-05-12 21:04:10,932 - jwst.assign_wcs.nirspec - INFO - Slitlet 9 is background only; assigned source_id=9
2026-05-12 21:04:10,935 - jwst.assign_wcs.nirspec - INFO - Slitlet 11 is background only; assigned source_id=11
2026-05-12 21:04:10,936 - jwst.assign_wcs.nirspec - INFO - Slitlet 12 is background only; assigned source_id=12
2026-05-12 21:04:10,937 - jwst.assign_wcs.nirspec - INFO - Slitlet 13 is background only; assigned source_id=13
2026-05-12 21:04:10,938 - jwst.assign_wcs.nirspec - INFO - Slitlet 14 is background only; assigned source_id=14
2026-05-12 21:04:10,938 - jwst.assign_wcs.nirspec - INFO - Slitlet 15 is background only; assigned source_id=15
2026-05-12 21:04:10,943 - jwst.assign_wcs.nirspec - INFO - Slitlet 17 is background only; assigned source_id=17
2026-05-12 21:04:10,944 - jwst.assign_wcs.nirspec - INFO - Slitlet 18 is background only; assigned source_id=18
2026-05-12 21:04:10,944 - jwst.assign_wcs.nirspec - INFO - Slitlet 19 is background only; assigned source_id=19
2026-05-12 21:04:10,945 - jwst.assign_wcs.nirspec - INFO - Slitlet 20 is background only; assigned source_id=20
2026-05-12 21:04:10,946 - jwst.assign_wcs.nirspec - INFO - Slitlet 21 is background only; assigned source_id=21
2026-05-12 21:04:10,947 - jwst.assign_wcs.nirspec - INFO - Slitlet 22 is background only; assigned source_id=22
2026-05-12 21:04:10,950 - jwst.assign_wcs.nirspec - INFO - Slitlet 24 is background only; assigned source_id=24
2026-05-12 21:04:10,952 - jwst.assign_wcs.nirspec - INFO - Slitlet 25 is background only; assigned source_id=25
2026-05-12 21:04:10,955 - jwst.assign_wcs.nirspec - INFO - Slitlet 27 is background only; assigned source_id=27
2026-05-12 21:04:10,962 - jwst.assign_wcs.nirspec - INFO - Slitlet 30 is background only; assigned source_id=30
2026-05-12 21:04:10,965 - jwst.assign_wcs.nirspec - INFO - Slitlet 32 is background only; assigned source_id=32
2026-05-12 21:04:10,968 - jwst.assign_wcs.nirspec - INFO - Slitlet 34 is background only; assigned source_id=34
2026-05-12 21:04:10,977 - jwst.assign_wcs.nirspec - INFO - Slitlet 38 is background only; assigned source_id=38
2026-05-12 21:04:10,978 - jwst.assign_wcs.nirspec - INFO - Slitlet 39 is background only; assigned source_id=39
2026-05-12 21:04:10,979 - jwst.assign_wcs.nirspec - INFO - Slitlet 40 is background only; assigned source_id=40
2026-05-12 21:04:10,980 - jwst.assign_wcs.nirspec - INFO - Slitlet 41 is background only; assigned source_id=41
2026-05-12 21:04:10,981 - jwst.assign_wcs.nirspec - INFO - Slitlet 42 is background only; assigned source_id=42
2026-05-12 21:04:10,982 - jwst.assign_wcs.nirspec - INFO - Slitlet 43 is background only; assigned source_id=43
2026-05-12 21:04:10,985 - jwst.assign_wcs.nirspec - INFO - Slitlet 45 is background only; assigned source_id=45
2026-05-12 21:04:10,986 - jwst.assign_wcs.nirspec - INFO - Slitlet 46 is background only; assigned source_id=46
2026-05-12 21:04:10,992 - jwst.assign_wcs.nirspec - INFO - Slitlet 49 is background only; assigned source_id=49
2026-05-12 21:04:10,996 - jwst.assign_wcs.nirspec - INFO - Slitlet 51 is background only; assigned source_id=51
2026-05-12 21:04:11,002 - jwst.assign_wcs.nirspec - INFO - Slitlet 54 is background only; assigned source_id=54
2026-05-12 21:04:11,003 - jwst.assign_wcs.nirspec - INFO - Slitlet 55 is background only; assigned source_id=55
2026-05-12 21:04:11,006 - jwst.assign_wcs.nirspec - INFO - Slitlet 57 is background only; assigned source_id=57
2026-05-12 21:04:11,007 - jwst.assign_wcs.nirspec - INFO - Slitlet 58 is background only; assigned source_id=58
2026-05-12 21:04:11,008 - jwst.assign_wcs.nirspec - INFO - Slitlet 59 is background only; assigned source_id=59
2026-05-12 21:04:11,011 - jwst.assign_wcs.nirspec - INFO - Slitlet 61 is background only; assigned source_id=61
2026-05-12 21:04:11,012 - jwst.assign_wcs.nirspec - INFO - Slitlet 62 is background only; assigned source_id=62
2026-05-12 21:04:11,013 - jwst.assign_wcs.nirspec - INFO - Slitlet 63 is background only; assigned source_id=63
2026-05-12 21:04:11,013 - jwst.assign_wcs.nirspec - INFO - Slitlet 64 is background only; assigned source_id=64
2026-05-12 21:04:11,014 - jwst.assign_wcs.nirspec - INFO - Slitlet 65 is background only; assigned source_id=65
2026-05-12 21:04:11,020 - jwst.assign_wcs.nirspec - INFO - Slitlet 68 is background only; assigned source_id=68
2026-05-12 21:04:11,023 - jwst.assign_wcs.nirspec - INFO - Slitlet 70 is background only; assigned source_id=70
2026-05-12 21:04:11,024 - jwst.assign_wcs.nirspec - INFO - Slitlet 71 is background only; assigned source_id=71
2026-05-12 21:04:11,025 - jwst.assign_wcs.nirspec - INFO - Slitlet 72 is background only; assigned source_id=72
2026-05-12 21:04:11,028 - jwst.assign_wcs.nirspec - INFO - Slitlet 73 is background only; assigned source_id=73
2026-05-12 21:04:11,029 - jwst.assign_wcs.nirspec - INFO - Slitlet 74 is background only; assigned source_id=74
2026-05-12 21:04:11,032 - jwst.assign_wcs.nirspec - INFO - Slitlet 76 is background only; assigned source_id=76
2026-05-12 21:04:11,033 - jwst.assign_wcs.nirspec - INFO - Slitlet 77 is background only; assigned source_id=77
2026-05-12 21:04:11,034 - jwst.assign_wcs.nirspec - INFO - Slitlet 78 is background only; assigned source_id=78
2026-05-12 21:04:11,040 - jwst.assign_wcs.nirspec - INFO - Slitlet 81 is background only; assigned source_id=81
2026-05-12 21:04:11,057 - jwst.assign_wcs.nirspec - INFO - Slitlet 88 is background only; assigned source_id=88
2026-05-12 21:04:11,060 - jwst.assign_wcs.nirspec - INFO - Slitlet 90 is background only; assigned source_id=90
2026-05-12 21:04:11,061 - jwst.assign_wcs.nirspec - INFO - Slitlet 91 is background only; assigned source_id=91
2026-05-12 21:04:11,070 - jwst.assign_wcs.nirspec - INFO - Slitlet 95 is background only; assigned source_id=95
2026-05-12 21:04:11,071 - jwst.assign_wcs.nirspec - INFO - Slitlet 96 is background only; assigned source_id=96
2026-05-12 21:04:11,072 - jwst.assign_wcs.nirspec - INFO - Slitlet 97 is background only; assigned source_id=97
2026-05-12 21:04:11,088 - jwst.assign_wcs.nirspec - INFO - Slitlet 104 is background only; assigned source_id=104
2026-05-12 21:04:11,089 - jwst.assign_wcs.nirspec - INFO - Slitlet 105 is background only; assigned source_id=105
2026-05-12 21:04:11,098 - jwst.assign_wcs.nirspec - INFO - Slitlet 109 is background only; assigned source_id=109
2026-05-12 21:04:11,098 - jwst.assign_wcs.nirspec - INFO - Slitlet 110 is background only; assigned source_id=110
2026-05-12 21:04:11,099 - jwst.assign_wcs.nirspec - INFO - Slitlet 111 is background only; assigned source_id=111
2026-05-12 21:04:11,100 - jwst.assign_wcs.nirspec - INFO - Slitlet 112 is background only; assigned source_id=112
2026-05-12 21:04:11,101 - jwst.assign_wcs.nirspec - INFO - Slitlet 113 is background only; assigned source_id=113
2026-05-12 21:04:11,107 - jwst.assign_wcs.nirspec - INFO - Slitlet 116 is background only; assigned source_id=116
2026-05-12 21:04:11,111 - jwst.assign_wcs.nirspec - INFO - Slitlet 118 is background only; assigned source_id=118
2026-05-12 21:04:11,112 - jwst.assign_wcs.nirspec - INFO - Slitlet 119 is background only; assigned source_id=119
2026-05-12 21:04:11,113 - jwst.assign_wcs.nirspec - INFO - Slitlet 120 is background only; assigned source_id=120
2026-05-12 21:04:11,113 - jwst.assign_wcs.nirspec - INFO - Slitlet 121 is background only; assigned source_id=121
2026-05-12 21:04:11,114 - jwst.assign_wcs.nirspec - INFO - Slitlet 122 is background only; assigned source_id=122
2026-05-12 21:04:11,115 - jwst.assign_wcs.nirspec - INFO - Slitlet 123 is background only; assigned source_id=123
2026-05-12 21:04:11,116 - jwst.assign_wcs.nirspec - INFO - Slitlet 124 is background only; assigned source_id=124
2026-05-12 21:04:11,119 - jwst.assign_wcs.nirspec - INFO - Slitlet 126 is background only; assigned source_id=126
2026-05-12 21:04:11,120 - jwst.assign_wcs.nirspec - INFO - Slitlet 127 is background only; assigned source_id=127
2026-05-12 21:04:11,121 - jwst.assign_wcs.nirspec - INFO - Slitlet 128 is background only; assigned source_id=128
2026-05-12 21:04:11,122 - jwst.assign_wcs.nirspec - INFO - Slitlet 129 is background only; assigned source_id=129
2026-05-12 21:04:11,123 - jwst.assign_wcs.nirspec - INFO - Slitlet 130 is background only; assigned source_id=130
2026-05-12 21:04:11,126 - jwst.assign_wcs.nirspec - INFO - Slitlet 132 is background only; assigned source_id=132
2026-05-12 21:04:11,127 - jwst.assign_wcs.nirspec - INFO - Slitlet 133 is background only; assigned source_id=133
2026-05-12 21:04:11,130 - jwst.assign_wcs.nirspec - INFO - Slitlet 135 is background only; assigned source_id=135
2026-05-12 21:04:11,134 - jwst.assign_wcs.nirspec - INFO - Slitlet 137 is background only; assigned source_id=137
2026-05-12 21:04:11,134 - jwst.assign_wcs.nirspec - INFO - Slitlet 138 is background only; assigned source_id=138
2026-05-12 21:04:11,142 - jwst.assign_wcs.nirspec - INFO - Slitlet 141 is background only; assigned source_id=141
2026-05-12 21:04:11,145 - jwst.assign_wcs.nirspec - INFO - Slitlet 143 is background only; assigned source_id=143
2026-05-12 21:04:11,146 - jwst.assign_wcs.nirspec - INFO - Slitlet 144 is background only; assigned source_id=144
2026-05-12 21:04:11,153 - jwst.assign_wcs.nirspec - INFO - Slitlet 147 is background only; assigned source_id=147
2026-05-12 21:04:11,156 - jwst.assign_wcs.nirspec - INFO - Slitlet 149 is background only; assigned source_id=149
2026-05-12 21:04:11,165 - jwst.assign_wcs.nirspec - INFO - Slitlet 153 is background only; assigned source_id=153
2026-05-12 21:04:11,205 - jwst.assign_wcs.nirspec - INFO - Slitlet 169 is background only; assigned source_id=169
2026-05-12 21:04:11,205 - jwst.assign_wcs.nirspec - INFO - Slitlet 170 is background only; assigned source_id=170
2026-05-12 21:04:11,206 - jwst.assign_wcs.nirspec - INFO - Slitlet 171 is background only; assigned source_id=171
2026-05-12 21:04:11,207 - jwst.assign_wcs.nirspec - INFO - Slitlet 172 is background only; assigned source_id=172
2026-05-12 21:04:11,214 - jwst.assign_wcs.nirspec - INFO - Slitlet 175 is background only; assigned source_id=175
2026-05-12 21:04:11,217 - jwst.assign_wcs.nirspec - INFO - Slitlet 177 is background only; assigned source_id=177
2026-05-12 21:04:11,218 - jwst.assign_wcs.nirspec - INFO - Slitlet 178 is background only; assigned source_id=178
2026-05-12 21:04:11,221 - jwst.assign_wcs.nirspec - INFO - Slitlet 180 is background only; assigned source_id=180
2026-05-12 21:04:11,225 - jwst.assign_wcs.nirspec - INFO - Slitlet 182 is background only; assigned source_id=182
2026-05-12 21:04:11,225 - jwst.assign_wcs.nirspec - INFO - Slitlet 183 is background only; assigned source_id=183
2026-05-12 21:04:11,237 - jwst.assign_wcs.nirspec - INFO - Slitlet 188 is background only; assigned source_id=188
2026-05-12 21:04:11,238 - jwst.assign_wcs.nirspec - INFO - Slitlet 189 is background only; assigned source_id=189
2026-05-12 21:04:11,239 - jwst.assign_wcs.nirspec - INFO - Slitlet 190 is background only; assigned source_id=190
2026-05-12 21:04:11,253 - jwst.assign_wcs.nirspec - INFO - Slitlet 196 is background only; assigned source_id=196
2026-05-12 21:04:11,259 - jwst.assign_wcs.nirspec - INFO - Slitlet 199 is background only; assigned source_id=199
2026-05-12 21:04:11,268 - jwst.assign_wcs.nirspec - INFO - Slitlet 203 is background only; assigned source_id=203
2026-05-12 21:04:11,274 - jwst.assign_wcs.nirspec - INFO - Slitlet 206 is background only; assigned source_id=206
2026-05-12 21:04:11,278 - jwst.assign_wcs.nirspec - INFO - Slitlet 208 is background only; assigned source_id=208
2026-05-12 21:04:11,284 - jwst.assign_wcs.nirspec - INFO - Slitlet 211 is background only; assigned source_id=211
2026-05-12 21:04:11,285 - jwst.assign_wcs.nirspec - INFO - Slitlet 212 is background only; assigned source_id=212
2026-05-12 21:04:11,289 - jwst.assign_wcs.nirspec - INFO - Slitlet 214 is background only; assigned source_id=214
2026-05-12 21:04:11,292 - jwst.assign_wcs.nirspec - INFO - Slitlet 216 is background only; assigned source_id=216
2026-05-12 21:04:11,293 - jwst.assign_wcs.nirspec - INFO - Slitlet 217 is background only; assigned source_id=217
2026-05-12 21:04:11,294 - jwst.assign_wcs.nirspec - INFO - Slitlet 218 is background only; assigned source_id=218
2026-05-12 21:04:11,295 - jwst.assign_wcs.nirspec - INFO - Slitlet 219 is background only; assigned source_id=219
2026-05-12 21:04:11,298 - jwst.assign_wcs.nirspec - INFO - Slitlet 221 is background only; assigned source_id=221
2026-05-12 21:04:11,299 - jwst.assign_wcs.nirspec - INFO - Slitlet 222 is background only; assigned source_id=222
2026-05-12 21:04:11,303 - jwst.assign_wcs.nirspec - INFO - Slitlet 224 is background only; assigned source_id=224
2026-05-12 21:04:11,306 - jwst.assign_wcs.nirspec - INFO - Slitlet 226 is background only; assigned source_id=226
2026-05-12 21:04:11,307 - jwst.assign_wcs.nirspec - INFO - Slitlet 227 is background only; assigned source_id=227
2026-05-12 21:04:11,311 - jwst.assign_wcs.nirspec - INFO - Slitlet 229 is background only; assigned source_id=229
2026-05-12 21:04:11,311 - jwst.assign_wcs.nirspec - INFO - Slitlet 230 is background only; assigned source_id=230
2026-05-12 21:04:11,312 - jwst.assign_wcs.nirspec - INFO - Slitlet 231 is background only; assigned source_id=231
2026-05-12 21:04:11,315 - jwst.assign_wcs.nirspec - INFO - Slitlet 233 is background only; assigned source_id=233
2026-05-12 21:04:11,316 - jwst.assign_wcs.nirspec - INFO - Slitlet 234 is background only; assigned source_id=234
2026-05-12 21:04:11,333 - jwst.assign_wcs.nirspec - INFO - Slitlet 241 is background only; assigned source_id=241
2026-05-12 21:04:11,334 - jwst.assign_wcs.nirspec - INFO - Slitlet 242 is background only; assigned source_id=242
2026-05-12 21:04:11,337 - jwst.assign_wcs.nirspec - INFO - Slitlet 244 is background only; assigned source_id=244
2026-05-12 21:04:11,359 - jwst.assign_wcs.nirspec - INFO - Slitlet 253 is background only; assigned source_id=253
2026-05-12 21:04:11,366 - jwst.assign_wcs.nirspec - INFO - Slitlet 256 is background only; assigned source_id=256
2026-05-12 21:04:11,369 - jwst.assign_wcs.nirspec - INFO - Slitlet 258 is background only; assigned source_id=258
2026-05-12 21:04:11,372 - jwst.assign_wcs.nirspec - INFO - Slitlet 260 is background only; assigned source_id=260
2026-05-12 21:04:11,373 - jwst.assign_wcs.nirspec - INFO - Slitlet 261 is background only; assigned source_id=261
2026-05-12 21:04:11,376 - jwst.assign_wcs.nirspec - INFO - Slitlet 263 is background only; assigned source_id=263
2026-05-12 21:04:11,380 - jwst.assign_wcs.nirspec - INFO - Slitlet 265 is background only; assigned source_id=265
2026-05-12 21:04:11,383 - jwst.assign_wcs.nirspec - INFO - Slitlet 267 is background only; assigned source_id=267
2026-05-12 21:04:11,389 - jwst.assign_wcs.nirspec - INFO - Slitlet 270 is background only; assigned source_id=270
2026-05-12 21:04:11,400 - jwst.assign_wcs.nirspec - INFO - Slitlet 275 is background only; assigned source_id=275
2026-05-12 21:04:11,401 - jwst.assign_wcs.nirspec - INFO - Slitlet 276 is background only; assigned source_id=276
2026-05-12 21:04:11,402 - jwst.assign_wcs.nirspec - INFO - Slitlet 277 is background only; assigned source_id=277
2026-05-12 21:04:11,413 - jwst.assign_wcs.nirspec - INFO - Slitlet 282 is background only; assigned source_id=282
2026-05-12 21:04:11,417 - jwst.assign_wcs.nirspec - INFO - Slitlet 284 is background only; assigned source_id=284
2026-05-12 21:04:11,418 - jwst.assign_wcs.nirspec - INFO - Slitlet 285 is background only; assigned source_id=285
2026-05-12 21:04:11,427 - jwst.assign_wcs.nirspec - INFO - Slitlet 289 is background only; assigned source_id=289
2026-05-12 21:04:11,430 - jwst.assign_wcs.nirspec - INFO - Slitlet 291 is background only; assigned source_id=291
2026-05-12 21:04:11,434 - jwst.assign_wcs.nirspec - INFO - Slitlet 293 is background only; assigned source_id=293
2026-05-12 21:04:11,437 - jwst.assign_wcs.nirspec - INFO - Slitlet 295 is background only; assigned source_id=295
2026-05-12 21:04:11,438 - jwst.assign_wcs.nirspec - INFO - Slitlet 296 is background only; assigned source_id=296
2026-05-12 21:04:11,439 - jwst.assign_wcs.nirspec - INFO - Slitlet 297 is background only; assigned source_id=297
2026-05-12 21:04:11,442 - jwst.assign_wcs.nirspec - INFO - Slitlet 299 is background only; assigned source_id=299
2026-05-12 21:04:11,449 - jwst.assign_wcs.nirspec - INFO - Slitlet 302 is background only; assigned source_id=302
2026-05-12 21:04:11,450 - jwst.assign_wcs.nirspec - INFO - Slitlet 303 is background only; assigned source_id=303
2026-05-12 21:04:11,453 - jwst.assign_wcs.nirspec - INFO - Slitlet 305 is background only; assigned source_id=305
2026-05-12 21:04:11,454 - jwst.assign_wcs.nirspec - INFO - Slitlet 306 is background only; assigned source_id=306
2026-05-12 21:04:11,455 - jwst.assign_wcs.nirspec - INFO - Slitlet 307 is background only; assigned source_id=307
2026-05-12 21:04:11,456 - jwst.assign_wcs.nirspec - INFO - Slitlet 308 is background only; assigned source_id=308
2026-05-12 21:04:11,457 - jwst.assign_wcs.nirspec - INFO - Slitlet 309 is background only; assigned source_id=309
2026-05-12 21:04:11,458 - jwst.assign_wcs.nirspec - INFO - Slitlet 310 is background only; assigned source_id=310
2026-05-12 21:04:11,458 - jwst.assign_wcs.nirspec - INFO - Slitlet 311 is background only; assigned source_id=311
2026-05-12 21:04:11,459 - jwst.assign_wcs.nirspec - INFO - Slitlet 312 is background only; assigned source_id=312
2026-05-12 21:04:11,460 - jwst.assign_wcs.nirspec - INFO - Slitlet 313 is background only; assigned source_id=313
2026-05-12 21:04:11,461 - jwst.assign_wcs.nirspec - INFO - Slitlet 314 is background only; assigned source_id=314
2026-05-12 21:04:11,462 - jwst.assign_wcs.nirspec - INFO - Slitlet 315 is background only; assigned source_id=315
2026-05-12 21:04:11,463 - jwst.assign_wcs.nirspec - INFO - Slitlet 316 is background only; assigned source_id=316
2026-05-12 21:04:11,466 - jwst.assign_wcs.nirspec - INFO - Slitlet 318 is background only; assigned source_id=318
2026-05-12 21:04:11,467 - jwst.assign_wcs.nirspec - INFO - Slitlet 319 is background only; assigned source_id=319
2026-05-12 21:04:11,468 - jwst.assign_wcs.nirspec - INFO - Slitlet 320 is background only; assigned source_id=320
2026-05-12 21:04:11,471 - jwst.assign_wcs.nirspec - INFO - Slitlet 322 is background only; assigned source_id=322
2026-05-12 21:04:11,472 - jwst.assign_wcs.nirspec - INFO - Slitlet 323 is background only; assigned source_id=323
2026-05-12 21:04:11,473 - jwst.assign_wcs.nirspec - INFO - Slitlet 324 is background only; assigned source_id=324
2026-05-12 21:04:11,476 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A1 with source_id = 106280.
2026-05-12 21:04:11,479 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S200A2 with source_id = 106281.
2026-05-12 21:04:11,482 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S400A1 with source_id = 106282.
2026-05-12 21:04:11,485 - jwst.assign_wcs.nirspec - INFO - Found fixed slit S1600A1 with source_id = 106283.
2026-05-12 21:04:11,516 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:04:11,516 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:04:11,517 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:04:11,518 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:04:11,794 - jwst.assign_wcs.nirspec - INFO - Removing slit 2 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,820 - jwst.assign_wcs.nirspec - INFO - Removing slit 3 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,846 - jwst.assign_wcs.nirspec - INFO - Removing slit 6 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,876 - jwst.assign_wcs.nirspec - INFO - Removing slit 7 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,902 - jwst.assign_wcs.nirspec - INFO - Removing slit 8 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,928 - jwst.assign_wcs.nirspec - INFO - Removing slit 12 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,954 - jwst.assign_wcs.nirspec - INFO - Removing slit 15 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:11,981 - jwst.assign_wcs.nirspec - INFO - Removing slit 19 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,007 - jwst.assign_wcs.nirspec - INFO - Removing slit 20 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,033 - jwst.assign_wcs.nirspec - INFO - Removing slit 21 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,059 - jwst.assign_wcs.nirspec - INFO - Removing slit 25 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,087 - jwst.assign_wcs.nirspec - INFO - Removing slit 27 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,117 - jwst.assign_wcs.nirspec - INFO - Removing slit 28 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,143 - jwst.assign_wcs.nirspec - INFO - Removing slit 29 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,169 - jwst.assign_wcs.nirspec - INFO - Removing slit 30 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,195 - jwst.assign_wcs.nirspec - INFO - Removing slit 33 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,221 - jwst.assign_wcs.nirspec - INFO - Removing slit 36 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,247 - jwst.assign_wcs.nirspec - INFO - Removing slit 37 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,274 - jwst.assign_wcs.nirspec - INFO - Removing slit 38 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,300 - jwst.assign_wcs.nirspec - INFO - Removing slit 43 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,325 - jwst.assign_wcs.nirspec - INFO - Removing slit 44 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,351 - jwst.assign_wcs.nirspec - INFO - Removing slit 46 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,378 - jwst.assign_wcs.nirspec - INFO - Removing slit 47 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,404 - jwst.assign_wcs.nirspec - INFO - Removing slit 49 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,435 - jwst.assign_wcs.nirspec - INFO - Removing slit 50 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,461 - jwst.assign_wcs.nirspec - INFO - Removing slit 52 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,487 - jwst.assign_wcs.nirspec - INFO - Removing slit 54 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,513 - jwst.assign_wcs.nirspec - INFO - Removing slit 57 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,544 - jwst.assign_wcs.nirspec - INFO - Removing slit 58 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,570 - jwst.assign_wcs.nirspec - INFO - Removing slit 59 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,596 - jwst.assign_wcs.nirspec - INFO - Removing slit 60 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,622 - jwst.assign_wcs.nirspec - INFO - Removing slit 61 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,648 - jwst.assign_wcs.nirspec - INFO - Removing slit 63 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,674 - jwst.assign_wcs.nirspec - INFO - Removing slit 64 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,700 - jwst.assign_wcs.nirspec - INFO - Removing slit 66 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,728 - jwst.assign_wcs.nirspec - INFO - Removing slit 67 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,754 - jwst.assign_wcs.nirspec - INFO - Removing slit 72 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,780 - jwst.assign_wcs.nirspec - INFO - Removing slit 73 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,806 - jwst.assign_wcs.nirspec - INFO - Removing slit 75 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,831 - jwst.assign_wcs.nirspec - INFO - Removing slit 76 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,857 - jwst.assign_wcs.nirspec - INFO - Removing slit 77 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,883 - jwst.assign_wcs.nirspec - INFO - Removing slit 82 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,909 - jwst.assign_wcs.nirspec - INFO - Removing slit 86 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,935 - jwst.assign_wcs.nirspec - INFO - Removing slit 87 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,962 - jwst.assign_wcs.nirspec - INFO - Removing slit 90 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:12,989 - jwst.assign_wcs.nirspec - INFO - Removing slit 91 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,015 - jwst.assign_wcs.nirspec - INFO - Removing slit 100 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,041 - jwst.assign_wcs.nirspec - INFO - Removing slit 101 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,068 - jwst.assign_wcs.nirspec - INFO - Removing slit 102 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,094 - jwst.assign_wcs.nirspec - INFO - Removing slit 103 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,145 - jwst.assign_wcs.nirspec - INFO - Removing slit 112 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,198 - jwst.assign_wcs.nirspec - INFO - Removing slit 116 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,224 - jwst.assign_wcs.nirspec - INFO - Removing slit 117 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,375 - jwst.assign_wcs.nirspec - INFO - Removing slit 125 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,401 - jwst.assign_wcs.nirspec - INFO - Removing slit 126 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,972 - jwst.assign_wcs.nirspec - INFO - Removing slit 4 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:13,999 - jwst.assign_wcs.nirspec - INFO - Removing slit 5 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,025 - jwst.assign_wcs.nirspec - INFO - Removing slit 9 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,051 - jwst.assign_wcs.nirspec - INFO - Removing slit 10 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,078 - jwst.assign_wcs.nirspec - INFO - Removing slit 11 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,106 - jwst.assign_wcs.nirspec - INFO - Removing slit 13 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,132 - jwst.assign_wcs.nirspec - INFO - Removing slit 14 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,158 - jwst.assign_wcs.nirspec - INFO - Removing slit 16 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,185 - jwst.assign_wcs.nirspec - INFO - Removing slit 17 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,211 - jwst.assign_wcs.nirspec - INFO - Removing slit 18 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,237 - jwst.assign_wcs.nirspec - INFO - Removing slit 22 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,263 - jwst.assign_wcs.nirspec - INFO - Removing slit 23 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,290 - jwst.assign_wcs.nirspec - INFO - Removing slit 24 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,316 - jwst.assign_wcs.nirspec - INFO - Removing slit 26 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,342 - jwst.assign_wcs.nirspec - INFO - Removing slit 31 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,369 - jwst.assign_wcs.nirspec - INFO - Removing slit 32 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,395 - jwst.assign_wcs.nirspec - INFO - Removing slit 34 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,421 - jwst.assign_wcs.nirspec - INFO - Removing slit 35 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,447 - jwst.assign_wcs.nirspec - INFO - Removing slit 39 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,473 - jwst.assign_wcs.nirspec - INFO - Removing slit 40 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,500 - jwst.assign_wcs.nirspec - INFO - Removing slit 41 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,526 - jwst.assign_wcs.nirspec - INFO - Removing slit 42 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,552 - jwst.assign_wcs.nirspec - INFO - Removing slit 45 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,580 - jwst.assign_wcs.nirspec - INFO - Removing slit 48 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,607 - jwst.assign_wcs.nirspec - INFO - Removing slit 51 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,634 - jwst.assign_wcs.nirspec - INFO - Removing slit 53 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,661 - jwst.assign_wcs.nirspec - INFO - Removing slit 55 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,687 - jwst.assign_wcs.nirspec - INFO - Removing slit 56 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,714 - jwst.assign_wcs.nirspec - INFO - Removing slit 62 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,740 - jwst.assign_wcs.nirspec - INFO - Removing slit 65 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,766 - jwst.assign_wcs.nirspec - INFO - Removing slit 68 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,792 - jwst.assign_wcs.nirspec - INFO - Removing slit 69 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,819 - jwst.assign_wcs.nirspec - INFO - Removing slit 70 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,844 - jwst.assign_wcs.nirspec - INFO - Removing slit 71 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,870 - jwst.assign_wcs.nirspec - INFO - Removing slit 74 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,897 - jwst.assign_wcs.nirspec - INFO - Removing slit 78 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,923 - jwst.assign_wcs.nirspec - INFO - Removing slit 79 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,949 - jwst.assign_wcs.nirspec - INFO - Removing slit 80 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:14,975 - jwst.assign_wcs.nirspec - INFO - Removing slit 81 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,001 - jwst.assign_wcs.nirspec - INFO - Removing slit 83 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,027 - jwst.assign_wcs.nirspec - INFO - Removing slit 84 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,055 - jwst.assign_wcs.nirspec - INFO - Removing slit 85 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,081 - jwst.assign_wcs.nirspec - INFO - Removing slit 88 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,107 - jwst.assign_wcs.nirspec - INFO - Removing slit 89 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,133 - jwst.assign_wcs.nirspec - INFO - Removing slit 92 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,159 - jwst.assign_wcs.nirspec - INFO - Removing slit 93 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,185 - jwst.assign_wcs.nirspec - INFO - Removing slit 94 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,212 - jwst.assign_wcs.nirspec - INFO - Removing slit 95 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,240 - jwst.assign_wcs.nirspec - INFO - Removing slit 96 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,266 - jwst.assign_wcs.nirspec - INFO - Removing slit 97 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,292 - jwst.assign_wcs.nirspec - INFO - Removing slit 98 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,318 - jwst.assign_wcs.nirspec - INFO - Removing slit 99 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,344 - jwst.assign_wcs.nirspec - INFO - Removing slit 104 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,370 - jwst.assign_wcs.nirspec - INFO - Removing slit 105 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,395 - jwst.assign_wcs.nirspec - INFO - Removing slit 106 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,421 - jwst.assign_wcs.nirspec - INFO - Removing slit 107 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,447 - jwst.assign_wcs.nirspec - INFO - Removing slit 108 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,472 - jwst.assign_wcs.nirspec - INFO - Removing slit 110 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,498 - jwst.assign_wcs.nirspec - INFO - Removing slit 111 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,525 - jwst.assign_wcs.nirspec - INFO - Removing slit 114 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,551 - jwst.assign_wcs.nirspec - INFO - Removing slit 115 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,578 - jwst.assign_wcs.nirspec - INFO - Removing slit 119 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,605 - jwst.assign_wcs.nirspec - INFO - Removing slit 120 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,633 - jwst.assign_wcs.nirspec - INFO - Removing slit 127 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,660 - jwst.assign_wcs.nirspec - INFO - Removing slit 128 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,687 - jwst.assign_wcs.nirspec - INFO - Removing slit 130 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,713 - jwst.assign_wcs.nirspec - INFO - Removing slit 132 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,739 - jwst.assign_wcs.nirspec - INFO - Removing slit 133 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,766 - jwst.assign_wcs.nirspec - INFO - Removing slit 137 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,791 - jwst.assign_wcs.nirspec - INFO - Removing slit 139 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,817 - jwst.assign_wcs.nirspec - INFO - Removing slit 140 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,843 - jwst.assign_wcs.nirspec - INFO - Removing slit 141 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:15,893 - jwst.assign_wcs.nirspec - INFO - Removing slit 146 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:20,108 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['109', '113', '118', '121', '122', '123', '124', '129', '131', '134', '135', '136', '138', '142', '143', '144', '145', '147', '148', '149', '150', '151', '152', '153', '154', '155', '156', '157', '158', '159', '160', '161', '162', '163', '164', '165', '166', '167', '168', '169', '170', '171', '172', '173', '174', '175', '176', '177', '178', '179', '180', '181', '182', '183', '184', '185', '186', '187', '188', '189', '190', '191', '192', '193', '194', '195', '196', '197', '198', '199', '200', '201', '202', '203', '204', '205', '206', '207', '208', '209', '210', '211', '212', '213', '214', '215', '216', '217', '218', '219', '220', '221', '222', '223', '224', '225', '226', '227', '228', '229', '230', '231', '232', '233', '234', '235', '236', '237', '238', '239', '240', '241', '242', '243', '244', '245', '246', '247', '248', '249', '250', '251', '252', '253', '254', '255', '256', '257', '258', '259', '260', '261', '262', '263', '264', '265', '266', '267', '268', '269', '270', '271', '272', '273', '274', '275', '276', '277', '278', '279', '280', '281', '282', '283', '284', '285', '286', '287', '288', '289', '290', '291', '292', '293', '294', '295', '296', '297', '298', '299', '300', '301', '302', '303', '304', '305', '306', '307', '308', '309', '310', '311', '312', '313', '314', '315', '316', '317', '318', '319', '320', '321', '322', '323', '324', '325', 'S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:04:20,112 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 200 open slitlets
2026-05-12 21:04:20,136 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.032005 deg
2026-05-12 21:04:20,136 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.3402841 deg
2026-05-12 21:04:20,137 - jwst.assign_wcs.nirspec - INFO - theta_y correction: -0.0009528550675413624 deg
2026-05-12 21:04:20,138 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00017302857743581868 deg
2026-05-12 21:04:20,148 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:04:20,239 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999975992115451
2026-05-12 21:04:20,266 - jwst.assign_wcs.nirspec - INFO - There are 29 open slits in quadrant 1
2026-05-12 21:04:20,757 - jwst.assign_wcs.nirspec - INFO - There are 8 open slits in quadrant 2
2026-05-12 21:04:20,804 - jwst.assign_wcs.nirspec - INFO - There are 76 open slits in quadrant 3
2026-05-12 21:04:21,607 - jwst.assign_wcs.nirspec - INFO - There are 83 open slits in quadrant 4
2026-05-12 21:04:22,517 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:04:22,753 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_msaspec pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None, 'msametafile': 'data/jw02750002001_01_msa.fits'}
2026-05-12 21:04:33,747 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:04:33,755 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:04:34,371 - stpipe.step - INFO - Step badpix_selfcal running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>, [], []).
2026-05-12 21:04:34,372 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:34,921 - stpipe.step - INFO - Step msa_flagging running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:34,927 - jwst.msaflagopen.msaflagopen_step - INFO - Using reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0007.json
2026-05-12 21:04:35,023 - jwst.msaflagopen.msaflag_open - INFO - 24 failed open shutters
2026-05-12 21:04:37,049 - stpipe.step - INFO - Step msa_flagging done
2026-05-12 21:04:37,657 - stpipe.step - INFO - Step clean_flicker_noise running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:37,658 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:38,205 - stpipe.step - INFO - Step imprint_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>, []).
2026-05-12 21:04:38,206 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:38,762 - stpipe.step - INFO - Step bkg_subtract running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>, []).
2026-05-12 21:04:38,762 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:39,315 - stpipe.step - INFO - Step extract_2d running with args (<ImageModel(2048, 2048) from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:39,316 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_MSASPEC
2026-05-12 21:04:39,317 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:04:39,317 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 106280
2026-05-12 21:04:39,318 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 106281
2026-05-12 21:04:39,319 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 106282
2026-05-12 21:04:39,320 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 106283
2026-05-12 21:04:39,389 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:04:39,390 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1080 1514
2026-05-12 21:04:39,390 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:04:39,682 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:04:39,690 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934602329 52.921593830 214.934818332 52.920599599 214.934906284 52.920606979 214.934690303 52.921601214
2026-05-12 21:04:39,691 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.934602329 52.921593830 214.934818332 52.920599599 214.934906284 52.920606979 214.934690303 52.921601214
2026-05-12 21:04:39,736 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:04:39,737 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 888 1324
2026-05-12 21:04:39,737 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:04:40,031 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:04:40,040 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943789677 52.921308263 214.944005290 52.920305067 214.944093855 52.920312544 214.943878263 52.921315744
2026-05-12 21:04:40,042 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.943789677 52.921308263 214.944005290 52.920305067 214.944093855 52.920312544 214.943878263 52.921315744
2026-05-12 21:04:40,086 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:04:40,087 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1021 1455
2026-05-12 21:04:40,087 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:04:40,384 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:04:40,392 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938144714 52.919777010 214.938391889 52.918635432 214.938572019 52.918650574 214.938324897 52.919792161
2026-05-12 21:04:40,394 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.938144714 52.919777010 214.938391889 52.918635432 214.938572019 52.918650574 214.938324897 52.919792161
2026-05-12 21:04:40,440 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:04:40,441 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1052 1483
2026-05-12 21:04:40,442 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:04:40,731 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:04:40,739 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.936972176 52.918421414 214.937077789 52.917934584 214.937807527 52.917995865 214.937702004 52.918482710
2026-05-12 21:04:40,741 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 214.936972176 52.918421414 214.937077789 52.917934584 214.937807527 52.917995865 214.937702004 52.918482710
2026-05-12 21:04:41,079 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:04:41,700 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:41,701 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_MSASPEC
2026-05-12 21:04:41,702 - jwst.srctype.srctype - INFO - source_id=106280, stellarity=0.0000, type=EXTENDED
2026-05-12 21:04:41,703 - jwst.srctype.srctype - INFO - source_id=106281, stellarity=0.0000, type=EXTENDED
2026-05-12 21:04:41,704 - jwst.srctype.srctype - INFO - source_id=106282, stellarity=0.0000, type=EXTENDED
2026-05-12 21:04:41,705 - jwst.srctype.srctype - INFO - source_id=106283, stellarity=0.0000, type=EXTENDED
2026-05-12 21:04:41,711 - stpipe.step - INFO - Step srctype done
2026-05-12 21:04:42,904 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:42,930 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:04:42,930 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:04:42,932 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:04:42,932 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:04:42,933 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:04:42,941 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:04:43,532 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:43,621 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:04:43,678 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:04:43,774 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:04:43,934 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:04:43,935 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:04:44,226 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:04:44,514 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:04:44,802 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:04:45,408 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:04:45,994 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:46,018 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:04:46,158 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:04:46,166 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:04:46,167 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:46,168 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:04:46,238 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:04:46,239 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:46,240 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:04:46,307 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:04:46,308 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:46,309 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:04:46,376 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:04:46,377 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:04:46,377 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:04:46,451 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:04:47,035 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_rate.fits>,).
2026-05-12 21:04:47,083 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:04:47,084 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:04:47,085 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:04:47,085 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:04:47,086 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:04:47,086 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:04:47,087 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:04:47,134 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:04:47,135 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:04:47,162 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:04:47,163 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:04:47,190 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:04:47,191 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:04:47,217 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:04:47,218 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:04:47,252 - stpipe.step - INFO - Step photom done
2026-05-12 21:04:48,582 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00003_nrs1_cal.fits>,).
2026-05-12 21:04:48,583 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:49,213 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw02750002001_07101_00003_nrs1_cal.fits>,).
2026-05-12 21:04:49,546 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw02750002001_07101_00003_nrs1_cal.fits
2026-05-12 21:04:50,662 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:50,670 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.1055 arcsec.
2026-05-12 21:04:50,672 - stcal.resample.resample - INFO - Output pixel scale: 0.10549824815029268 arcsec.
2026-05-12 21:04:50,672 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:50,673 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:50,674 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:50,674 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:50,675 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:50,708 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:50,711 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:50,714 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:50,717 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (36, 434)
2026-05-12 21:04:50,846 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934646997 52.920577395 214.934867933 52.920577395 214.934867933 52.921594386 214.934646997 52.921594386
2026-05-12 21:04:51,036 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:51,044 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:04:51,046 - stcal.resample.resample - INFO - Output pixel scale: 0.10541496261930275 arcsec.
2026-05-12 21:04:51,046 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:51,047 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:51,047 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:51,048 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:51,049 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:51,083 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:51,087 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:51,090 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:51,092 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (36, 436)
2026-05-12 21:04:51,219 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943835670 52.920287721 214.944054104 52.920287721 214.944054104 52.921304091 214.943835670 52.921304091
2026-05-12 21:04:51,411 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:51,422 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:04:51,423 - stcal.resample.resample - INFO - Output pixel scale: 0.10531245343930307 arcsec.
2026-05-12 21:04:51,424 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:51,425 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:51,425 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:51,426 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:51,427 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:51,462 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:51,466 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:51,469 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:51,472 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:04:51,601 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938235271 52.918622140 214.938486470 52.918622140 214.938486470 52.919782435 214.938235271 52.919782435
2026-05-12 21:04:52,545 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:04:52,553 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:04:52,555 - stcal.resample.resample - INFO - Output pixel scale: 0.10523123705014605 arcsec.
2026-05-12 21:04:52,556 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:04:52,556 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:04:52,557 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:04:52,558 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:04:52,559 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:52,588 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:04:52,590 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:52,592 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:52,594 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:04:52,721 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937338637 52.917952166 214.937445482 52.917952166 214.937445482 52.918444897 214.937338637 52.918444897
2026-05-12 21:04:53,045 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00003_nrs1_s2d.fits
2026-05-12 21:04:53,046 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:04:53,252 - jwst.pipeline.calwebb_spec2 - INFO - Extracting 4 fixed slits
2026-05-12 21:04:53,915 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw02750002001_07101_00003_nrs1_s2d.fits>,).
2026-05-12 21:04:53,947 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:04:53,972 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:04:54,049 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:04:54,053 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:54,056 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:04:54,057 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:04:54,058 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:04:54,059 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:04:54,114 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:04:54,118 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:54,122 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 218, wavelength 3.44
2026-05-12 21:04:54,123 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:04:54,124 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:04:54,125 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:04:54,186 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:04:54,189 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:54,193 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:04:54,194 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:04:54,195 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:04:54,196 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:04:54,263 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:04:54,270 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:04:54,273 - jwst.extract_1d.extract - INFO - Computed source location is 8.85, at pixel 215, wavelength 3.43
2026-05-12 21:04:54,274 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:04:54,275 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.65 pixels
2026-05-12 21:04:54,276 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.85 -> 10.85 (inclusive)
2026-05-12 21:04:54,342 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:04:54,462 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00003_nrs1_x1d.fits
2026-05-12 21:04:54,463 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw02750002001_07101_00003_nrs1
2026-05-12 21:04:54,465 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:04:54,466 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:04:55,096 - stpipe.step - INFO - Saved model in data/stage2/jw02750002001_07101_00003_nrs1_cal.fits
2026-05-12 21:04:55,096 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:04:55,097 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:04:55,125 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:04:55,138 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:04:55,148 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:04:55,158 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:04:55,181 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:04:55,183 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:04:55,184 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:04:55,185 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:04:55,186 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:04:55,187 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:04:55,188 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:04:55,189 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:04:55,193 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:04:55,194 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:04:55,194 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:04:55,195 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:04:55,196 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:04:55,197 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:04:55,198 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:04:55,199 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:04:55,200 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:04:55,201 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:04:55,203 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:04:55,204 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:04:55,205 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:04:55,206 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:04:55,208 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:04:55,209 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:04:55,209 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:04:55,210 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:04:55,211 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:04:55,212 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:04:55,213 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:04:55,215 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:04:55,216 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:04:55,218 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00001_nrs1_rate.fits
2026-05-12 21:04:56,255 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00001_nrs1_rate.fits',).
2026-05-12 21:04:56,286 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:04:56,322 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00001_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:04:56,328 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json 6.4 M bytes (1 / 1 files) (0 / 6.4 M bytes)
2026-05-12 21:04:56,541 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:04:56,542 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:04:56,543 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:04:56,543 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:04:56,544 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:04:56,545 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:04:56,545 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:04:56,546 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:04:56,547 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:04:56,547 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:04:56,548 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:04:56,549 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:04:56,549 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:04:56,550 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:04:56,550 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:04:56,551 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:04:56,551 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:04:56,552 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:04:56,552 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:04:56,553 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:04:56,553 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:04:56,554 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:04:56,555 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:04:56,555 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:04:56,556 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:04:56,556 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:04:56,557 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:04:56,558 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:04:56,558 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:04:56,558 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:04:56,559 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:04:56,560 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:04:56,560 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:04:56,561 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:04:56,562 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:04:56,562 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:04:56,563 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00001_nrs1
2026-05-12 21:04:56,564 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00001_nrs1_rate.fits ...
2026-05-12 21:04:56,934 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:04:56,983 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:04:56,984 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:04:56,985 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:04:56,986 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:04:57,260 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:04:57,261 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:04:57,262 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:04:57,286 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:04:57,287 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:04:57,288 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:04:57,289 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:04:57,300 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:04:57,396 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562753949621
2026-05-12 21:04:57,426 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:04:57,427 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:04:57,428 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:04:57,428 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:04:57,429 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:04:57,596 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:04:57,907 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:04:57,913 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:04:58,190 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>, [], []).
2026-05-12 21:04:58,192 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:58,441 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:04:58,442 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:58,699 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:04:58,700 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:58,957 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>, []).
2026-05-12 21:04:58,957 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:59,220 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>, []).
2026-05-12 21:04:59,221 - stpipe.step - INFO - Step skipped.
2026-05-12 21:04:59,493 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:04:59,494 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:04:59,495 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:04:59,496 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:04:59,496 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:04:59,497 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:04:59,498 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:04:59,563 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:04:59,564 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:04:59,564 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:04:59,792 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:04:59,801 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109139157 -27.866299570 53.108918012 -27.865316131 53.108858713 -27.865326991 53.109079843 -27.866310435
2026-05-12 21:04:59,802 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109139157 -27.866299570 53.108918012 -27.865316131 53.108858713 -27.865326991 53.109079843 -27.866310435
2026-05-12 21:04:59,848 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:04:59,849 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:04:59,851 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:05:00,078 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:00,087 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102866050 -27.866380094 53.102644414 -27.865387710 53.102584705 -27.865398696 53.102806327 -27.866391084
2026-05-12 21:05:00,088 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102866050 -27.866380094 53.102644414 -27.865387710 53.102584705 -27.865398696 53.102806327 -27.866391084
2026-05-12 21:05:00,133 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:05:00,133 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:05:00,134 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:05:00,361 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:00,369 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106593071 -27.864627642 53.106339684 -27.863498429 53.106218234 -27.863520702 53.106471588 -27.864649926
2026-05-12 21:05:00,370 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106593071 -27.864627642 53.106339684 -27.863498429 53.106218234 -27.863520702 53.106471588 -27.864649926
2026-05-12 21:05:00,415 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:05:00,415 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:05:00,416 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:05:00,641 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:00,649 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107289839 -27.863228421 53.107181648 -27.862746871 53.106689625 -27.862837039 53.106797759 -27.863318607
2026-05-12 21:05:00,650 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107289839 -27.863228421 53.107181648 -27.862746871 53.106689625 -27.862837039 53.106797759 -27.863318607
2026-05-12 21:05:01,229 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:05:01,516 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:01,517 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:01,518 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:05:01,519 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:05:01,522 - stpipe.step - INFO - Step srctype done
2026-05-12 21:05:01,806 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:01,807 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:01,808 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:02,092 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:02,118 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:05:02,118 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:05:02,120 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:05:02,120 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:05:02,121 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:05:02,125 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:05:02,414 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:02,466 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:05:02,517 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:05:02,612 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:05:02,757 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:05:02,758 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:05:02,985 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:05:03,213 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:05:03,435 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:05:03,894 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:05:04,182 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:04,197 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:05:04,338 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:05:04,346 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:05:04,347 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:04,348 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:05:04,415 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:05:04,416 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:04,416 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:05:04,488 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:05:04,489 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:04,489 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:05:04,557 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:05:04,558 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:04,559 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:05:04,631 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:05:04,921 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:04,922 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:05,201 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_rate.fits>,).
2026-05-12 21:05:05,230 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:05:05,231 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:05:05,232 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:05:05,233 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:05:05,233 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:05:05,234 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:05:05,235 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:05:05,282 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:05:05,283 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:05:05,310 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:05:05,311 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:05:05,338 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:05:05,339 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:05:05,365 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:05:05,366 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:05:05,396 - stpipe.step - INFO - Step photom done
2026-05-12 21:05:06,027 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00001_nrs1_cal.fits>,).
2026-05-12 21:05:06,029 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:06,322 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00001_nrs1_cal.fits>,).
2026-05-12 21:05:06,581 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00001_nrs1_cal.fits
2026-05-12 21:05:07,430 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:07,438 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:05:07,440 - stcal.resample.resample - INFO - Output pixel scale: 0.10549439044784638 arcsec.
2026-05-12 21:05:07,440 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:07,441 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:07,441 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:07,442 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:07,443 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:07,475 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:07,478 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:07,481 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:07,483 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:07,597 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108882604 -27.866301909 53.109108805 -27.866301909 53.109108805 -27.865295952 53.108882604 -27.865295952
2026-05-12 21:05:07,772 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:07,780 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:05:07,782 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123813800356 arcsec.
2026-05-12 21:05:07,782 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:07,783 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:07,783 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:07,784 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:07,785 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:07,817 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:07,820 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:07,823 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:07,826 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:07,941 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102609896 -27.866377741 53.102834436 -27.866377741 53.102834436 -27.865372318 53.102609896 -27.865372318
2026-05-12 21:05:08,457 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:08,465 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:05:08,466 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862683011527 arcsec.
2026-05-12 21:05:08,467 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:08,467 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:08,468 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:08,469 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:08,470 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:08,504 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:08,507 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:08,510 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:08,513 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:08,628 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106274364 -27.864636819 53.106531889 -27.864636819 53.106531889 -27.863489086 53.106274364 -27.863489086
2026-05-12 21:05:08,792 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:08,800 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:05:08,802 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738482897362 arcsec.
2026-05-12 21:05:08,802 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:08,803 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:08,803 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:08,804 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:08,806 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:08,831 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:08,833 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:08,835 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:08,837 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:08,948 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106932778 -27.863266598 53.107042251 -27.863266598 53.107042251 -27.862779207 53.106932778 -27.862779207
2026-05-12 21:05:09,235 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00001_nrs1_s2d.fits
2026-05-12 21:05:09,236 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:05:09,588 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00001_nrs1_s2d.fits>,).
2026-05-12 21:05:09,621 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:05:09,636 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:05:09,689 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:05:09,693 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:09,696 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:05:09,697 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:09,698 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:09,699 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:09,752 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:05:09,756 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:09,759 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:05:09,760 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:09,761 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:09,762 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:09,812 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:05:09,815 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:09,818 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:05:09,819 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:05:09,820 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:05:09,821 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:05:09,873 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:05:09,876 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:09,879 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:05:09,880 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:05:09,881 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:05:09,882 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:05:10,040 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00001_nrs1_x1d.fits
2026-05-12 21:05:10,041 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:05:10,042 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00001_nrs1
2026-05-12 21:05:10,043 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:05:10,045 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:10,515 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00001_nrs1_cal.fits
2026-05-12 21:05:10,515 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:05:10,516 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:05:10,539 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:05:10,551 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:10,560 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:05:10,570 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:10,593 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:05:10,594 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:05:10,595 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:05:10,595 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:05:10,597 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:05:10,598 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:05:10,599 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:05:10,600 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:05:10,604 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:05:10,605 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:10,606 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:10,607 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:10,607 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:10,608 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:10,609 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:10,611 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:10,611 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:05:10,612 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:05:10,613 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:10,614 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:05:10,615 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:05:10,615 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:05:10,616 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:05:10,617 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:10,617 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:10,618 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:05:10,619 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:10,620 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:05:10,621 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:10,622 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:10,623 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:05:10,625 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00002_nrs1_rate.fits
2026-05-12 21:05:10,914 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00002_nrs1_rate.fits',).
2026-05-12 21:05:10,945 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:05:10,976 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00002_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:05:10,982 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:05:10,983 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:05:10,983 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:05:10,984 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:05:10,984 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:05:10,985 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:05:10,985 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:05:10,986 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:05:10,987 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:05:10,987 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:05:10,988 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:05:10,989 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:05:10,989 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:05:10,990 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:05:10,990 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:05:10,991 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:05:10,992 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:05:10,992 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:05:10,992 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:05:10,993 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:05:10,993 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:05:10,994 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:05:10,994 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:05:10,995 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:05:10,995 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:05:10,996 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:05:10,997 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:05:10,998 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:05:10,998 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:05:10,998 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:05:10,999 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:05:11,000 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:05:11,000 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:05:11,001 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:05:11,001 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:05:11,002 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:05:11,003 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00002_nrs1
2026-05-12 21:05:11,003 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00002_nrs1_rate.fits ...
2026-05-12 21:05:11,349 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:11,399 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:11,400 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:11,401 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:11,402 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:11,667 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:05:11,668 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:05:11,669 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:05:11,694 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:11,694 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:11,696 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:11,696 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:11,707 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:05:11,801 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562684907892
2026-05-12 21:05:11,828 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:05:11,829 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:05:11,830 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:05:11,830 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:05:11,831 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:05:11,996 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:05:12,306 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:05:12,310 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:05:12,593 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>, [], []).
2026-05-12 21:05:12,594 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:12,860 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:12,861 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:13,132 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:13,133 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:13,401 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>, []).
2026-05-12 21:05:13,403 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:13,664 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>, []).
2026-05-12 21:05:13,665 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:13,933 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:13,934 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:13,935 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:05:13,936 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:05:13,936 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:05:13,937 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:05:13,937 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:05:14,004 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:05:14,004 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:05:14,005 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:05:14,239 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:14,248 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108935025 -27.866200624 53.108713880 -27.865217185 53.108654581 -27.865228045 53.108875711 -27.866211489
2026-05-12 21:05:14,249 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.108935025 -27.866200624 53.108713880 -27.865217185 53.108654581 -27.865228045 53.108875711 -27.866211489
2026-05-12 21:05:14,295 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:05:14,296 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:05:14,298 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:05:14,528 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:14,536 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102661923 -27.866281146 53.102440288 -27.865288762 53.102380579 -27.865299747 53.102602200 -27.866292136
2026-05-12 21:05:14,538 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102661923 -27.866281146 53.102440288 -27.865288762 53.102380579 -27.865299747 53.102602200 -27.866292136
2026-05-12 21:05:14,584 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:05:14,585 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:05:14,586 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:05:14,819 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:14,827 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106388941 -27.864528695 53.106135555 -27.863399482 53.106014106 -27.863421756 53.106267458 -27.864550979
2026-05-12 21:05:14,828 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106388941 -27.864528695 53.106135555 -27.863399482 53.106014106 -27.863421756 53.106267458 -27.864550979
2026-05-12 21:05:14,874 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:05:14,874 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:05:14,875 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:05:15,105 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:15,113 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107085710 -27.863129474 53.106977519 -27.862647925 53.106485496 -27.862738093 53.106593630 -27.863219660
2026-05-12 21:05:15,115 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107085710 -27.863129474 53.106977519 -27.862647925 53.106485496 -27.862738093 53.106593630 -27.863219660
2026-05-12 21:05:15,708 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:05:15,993 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:15,994 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:15,995 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:05:15,995 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:05:15,999 - stpipe.step - INFO - Step srctype done
2026-05-12 21:05:16,268 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:16,269 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:16,270 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:16,569 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:16,585 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:05:16,586 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:05:16,587 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:05:16,588 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:05:16,589 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:05:16,592 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:05:16,891 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:16,944 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:05:16,996 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:05:17,087 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:05:17,231 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:05:17,232 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:05:17,459 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:05:17,684 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:05:17,911 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:05:18,375 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:05:18,670 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:18,685 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:05:18,824 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:05:18,832 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:05:18,833 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:18,833 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:05:18,900 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:05:18,900 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:18,901 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:05:18,968 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:05:18,968 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:18,969 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:05:19,037 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:05:19,038 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:19,038 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:05:19,108 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:05:19,396 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:19,398 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:19,680 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_rate.fits>,).
2026-05-12 21:05:19,709 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:05:19,710 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:05:19,711 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:05:19,711 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:05:19,712 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:05:19,712 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:05:19,713 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:05:19,760 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:05:19,762 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:05:19,789 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:05:19,790 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:05:19,816 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:05:19,817 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:05:19,845 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:05:19,846 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:05:19,876 - stpipe.step - INFO - Step photom done
2026-05-12 21:05:20,534 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00002_nrs1_cal.fits>,).
2026-05-12 21:05:20,535 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:20,856 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00002_nrs1_cal.fits>,).
2026-05-12 21:05:21,111 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00002_nrs1_cal.fits
2026-05-12 21:05:21,958 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:21,966 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:05:21,967 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438968262992 arcsec.
2026-05-12 21:05:21,968 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:21,968 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:21,969 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:21,969 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:21,971 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:22,002 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:22,005 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:22,008 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:22,010 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:22,124 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108678472 -27.866202963 53.108904672 -27.866202963 53.108904672 -27.865197006 53.108678472 -27.865197006
2026-05-12 21:05:22,296 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:22,304 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:05:22,305 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123749515828 arcsec.
2026-05-12 21:05:22,306 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:22,307 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:22,307 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:22,308 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:22,309 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:22,340 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:22,343 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:22,346 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:22,348 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:22,462 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102405769 -27.866278793 53.102630309 -27.866278793 53.102630309 -27.865273370 53.102405769 -27.865273370
2026-05-12 21:05:22,968 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:22,976 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:05:22,978 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862612192593 arcsec.
2026-05-12 21:05:22,978 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:22,979 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:22,979 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:22,980 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:22,981 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:23,016 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:23,019 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:23,022 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:23,025 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:23,141 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106070236 -27.864537873 53.106327759 -27.864537873 53.106327759 -27.863390139 53.106070236 -27.863390139
2026-05-12 21:05:23,325 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:23,333 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:05:23,335 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738408761935 arcsec.
2026-05-12 21:05:23,336 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:23,336 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:23,337 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:23,337 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:23,339 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:23,366 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:23,368 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:23,370 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:23,372 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:23,485 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106728649 -27.863167652 53.106838121 -27.863167652 53.106838121 -27.862680261 53.106728649 -27.862680261
2026-05-12 21:05:23,762 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00002_nrs1_s2d.fits
2026-05-12 21:05:23,763 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:05:24,130 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00002_nrs1_s2d.fits>,).
2026-05-12 21:05:24,146 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:05:24,161 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:05:24,215 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:05:24,219 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:24,222 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:05:24,223 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:24,224 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:24,225 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:24,275 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:05:24,278 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:24,281 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:05:24,282 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:24,283 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:24,284 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:24,334 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:05:24,337 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:24,340 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:05:24,342 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:05:24,342 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:05:24,343 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:05:24,394 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:05:24,397 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:24,400 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:05:24,401 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:05:24,402 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:05:24,403 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:05:24,558 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00002_nrs1_x1d.fits
2026-05-12 21:05:24,559 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:05:24,560 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00002_nrs1
2026-05-12 21:05:24,562 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:05:24,563 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:25,043 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00002_nrs1_cal.fits
2026-05-12 21:05:25,043 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:05:25,044 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:05:25,067 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:05:25,080 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:25,088 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:05:25,098 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:25,120 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:05:25,122 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:05:25,122 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:05:25,123 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:05:25,124 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:05:25,125 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:05:25,126 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:05:25,127 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:05:25,130 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:05:25,131 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:25,132 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:25,133 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:25,134 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:25,135 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:25,136 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:25,137 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:25,138 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:05:25,139 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:05:25,140 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:25,140 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:05:25,142 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:05:25,143 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:05:25,144 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:05:25,145 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:25,145 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:25,146 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:05:25,147 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:25,148 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:05:25,149 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:25,150 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:25,152 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:05:25,155 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:25,456 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00003_nrs1_rate.fits',).
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00003_nrs1_rate.fits
2026-05-12 21:05:25,487 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:05:25,521 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00003_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:05:25,526 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:05:25,527 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:05:25,528 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:05:25,528 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:05:25,529 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:05:25,530 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:05:25,530 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:05:25,531 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:05:25,531 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:05:25,532 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:05:25,533 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:05:25,533 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:05:25,534 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:05:25,534 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:05:25,535 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:05:25,535 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:05:25,536 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:05:25,536 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:05:25,537 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:05:25,537 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:05:25,538 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:05:25,538 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:05:25,539 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:05:25,539 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:05:25,540 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:05:25,540 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:05:25,542 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:05:25,542 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:05:25,542 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:05:25,543 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:05:25,544 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:05:25,544 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:05:25,545 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:05:25,545 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:05:25,546 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:05:25,547 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:05:25,547 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00003_nrs1
2026-05-12 21:05:25,548 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00003_nrs1_rate.fits ...
2026-05-12 21:05:25,928 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:25,977 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:25,978 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:25,979 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:25,980 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:26,244 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:05:26,245 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:05:26,246 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:05:26,271 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:26,272 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:26,272 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:26,273 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:26,283 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:05:26,376 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562615866163
2026-05-12 21:05:26,404 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:05:26,405 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:05:26,405 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:05:26,406 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:05:26,406 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:05:26,575 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:05:26,883 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:05:26,888 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:05:27,177 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>, [], []).
2026-05-12 21:05:27,178 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:27,453 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:27,454 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:27,730 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:27,731 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:28,011 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>, []).
2026-05-12 21:05:28,012 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:28,288 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>, []).
2026-05-12 21:05:28,289 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:28,564 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:28,565 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:28,566 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:05:28,567 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:05:28,567 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:05:28,568 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:05:28,568 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:05:28,633 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:05:28,634 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:05:28,635 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:05:28,865 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:28,874 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109015079 -27.866337628 53.108793934 -27.865354189 53.108734635 -27.865365049 53.108955765 -27.866348493
2026-05-12 21:05:28,875 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109015079 -27.866337628 53.108793934 -27.865354189 53.108734635 -27.865365049 53.108955765 -27.866348493
2026-05-12 21:05:28,922 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:05:28,923 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:05:28,923 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:05:29,152 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:29,160 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102741969 -27.866418148 53.102520334 -27.865425764 53.102460625 -27.865436750 53.102682246 -27.866429139
2026-05-12 21:05:29,162 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102741969 -27.866418148 53.102520334 -27.865425764 53.102460625 -27.865436750 53.102682246 -27.866429139
2026-05-12 21:05:29,207 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:05:29,207 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:05:29,208 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:05:29,435 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:29,443 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106468992 -27.864665699 53.106215606 -27.863536486 53.106094157 -27.863558759 53.106347510 -27.864687982
2026-05-12 21:05:29,445 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106468992 -27.864665699 53.106215606 -27.863536486 53.106094157 -27.863558759 53.106347510 -27.864687982
2026-05-12 21:05:29,490 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:05:29,491 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:05:29,491 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:05:29,713 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:29,722 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107165762 -27.863266478 53.107057571 -27.862784929 53.106565548 -27.862875096 53.106673682 -27.863356664
2026-05-12 21:05:29,723 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107165762 -27.863266478 53.107057571 -27.862784929 53.106565548 -27.862875096 53.106673682 -27.863356664
2026-05-12 21:05:30,285 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:05:30,572 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:30,573 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:30,574 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:05:30,574 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:05:30,578 - stpipe.step - INFO - Step srctype done
2026-05-12 21:05:30,847 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:30,848 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:30,849 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:31,127 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:31,143 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:05:31,143 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:05:31,145 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:05:31,146 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:05:31,147 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:05:31,150 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:05:31,427 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:31,480 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:05:31,531 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:05:31,623 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:05:31,763 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:05:31,764 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:05:31,988 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:05:32,210 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:05:32,434 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:05:32,895 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:05:33,182 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:33,197 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:05:33,336 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:05:33,344 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:05:33,345 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:33,346 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:05:33,413 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:05:33,413 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:33,414 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:05:33,481 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:05:33,482 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:33,482 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:05:33,550 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:05:33,551 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:33,552 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:05:33,622 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:05:33,894 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:33,895 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:34,170 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_rate.fits>,).
2026-05-12 21:05:34,198 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:05:34,198 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:05:34,199 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:05:34,200 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:05:34,200 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:05:34,201 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:05:34,201 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:05:34,247 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:05:34,249 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:05:34,275 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:05:34,276 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:05:34,304 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:05:34,305 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:05:34,332 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:05:34,333 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:05:34,363 - stpipe.step - INFO - Step photom done
2026-05-12 21:05:35,002 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00003_nrs1_cal.fits>,).
2026-05-12 21:05:35,004 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:35,298 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00003_nrs1_cal.fits>,).
2026-05-12 21:05:35,555 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00003_nrs1_cal.fits
2026-05-12 21:05:36,414 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:36,422 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:05:36,424 - stcal.resample.resample - INFO - Output pixel scale: 0.1054943890004966 arcsec.
2026-05-12 21:05:36,424 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:36,425 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:36,426 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:36,426 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:36,427 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:36,460 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:36,463 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:36,466 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:36,468 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:36,583 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108758526 -27.866339967 53.108984726 -27.866339967 53.108984726 -27.865334010 53.108758526 -27.865334010
2026-05-12 21:05:36,761 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:36,769 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:05:36,770 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123670705224 arcsec.
2026-05-12 21:05:36,771 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:36,771 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:36,772 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:36,772 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:36,774 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:36,805 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:36,808 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:36,811 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:36,814 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:36,928 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102485815 -27.866415796 53.102710355 -27.866415796 53.102710355 -27.865410372 53.102485815 -27.865410372
2026-05-12 21:05:37,444 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:37,452 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:05:37,454 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862552562731 arcsec.
2026-05-12 21:05:37,454 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:37,455 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:37,455 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:37,456 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:37,458 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:37,491 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:37,495 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:37,498 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:37,501 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:37,616 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106150287 -27.864674876 53.106407810 -27.864674876 53.106407810 -27.863527143 53.106150287 -27.863527143
2026-05-12 21:05:37,781 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:37,789 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:05:37,790 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738343030999 arcsec.
2026-05-12 21:05:37,791 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:37,791 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:37,792 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:37,793 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:37,794 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:37,820 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:37,822 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:37,823 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:37,825 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:37,937 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106808701 -27.863304655 53.106918174 -27.863304655 53.106918174 -27.862817264 53.106808701 -27.862817264
2026-05-12 21:05:38,210 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00003_nrs1_s2d.fits
2026-05-12 21:05:38,211 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:05:38,582 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00003_nrs1_s2d.fits>,).
2026-05-12 21:05:38,599 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:05:38,613 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:05:38,668 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:05:38,672 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:38,675 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:05:38,677 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:38,678 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:38,679 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:38,728 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:05:38,731 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:38,734 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:05:38,735 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:38,736 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:38,737 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:38,787 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:05:38,790 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:38,794 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:05:38,795 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:05:38,796 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:05:38,797 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:05:38,847 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:05:38,851 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:38,854 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:05:38,855 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:05:38,856 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:05:38,857 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:05:39,012 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00003_nrs1_x1d.fits
2026-05-12 21:05:39,012 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:05:39,013 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00003_nrs1
2026-05-12 21:05:39,015 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:05:39,016 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:39,490 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00003_nrs1_cal.fits
2026-05-12 21:05:39,490 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:05:39,491 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:05:39,513 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:05:39,526 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:39,535 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:05:39,545 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:39,567 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:05:39,569 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:05:39,570 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:05:39,571 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:05:39,572 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:05:39,573 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:05:39,574 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:05:39,575 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:05:39,579 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:05:39,580 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:39,581 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:39,582 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:39,583 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:39,584 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:39,585 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:39,586 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:39,587 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:05:39,588 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:05:39,589 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:39,590 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:05:39,591 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:05:39,592 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:05:39,593 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:05:39,594 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:39,594 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:39,596 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:05:39,596 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:39,597 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:05:39,598 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:39,599 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:39,600 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:05:39,602 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:39,921 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00004_nrs1_rate.fits',).
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00004_nrs1_rate.fits
2026-05-12 21:05:39,952 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:05:39,984 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00004_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:05:39,989 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:05:39,990 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:05:39,991 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:05:39,991 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:05:39,992 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:05:39,992 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:05:39,993 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:05:39,993 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:05:39,994 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:05:39,994 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:05:39,995 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:05:39,996 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:05:39,996 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:05:39,997 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:05:39,997 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:05:39,998 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:05:39,998 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:05:39,999 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:05:39,999 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:05:40,000 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:05:40,000 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:05:40,001 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:05:40,001 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:05:40,003 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:05:40,003 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:05:40,004 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:05:40,005 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:05:40,005 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:05:40,006 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:05:40,006 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:05:40,007 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:05:40,008 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:05:40,008 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:05:40,008 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:05:40,009 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:05:40,010 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:05:40,010 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00004_nrs1
2026-05-12 21:05:40,011 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00004_nrs1_rate.fits ...
2026-05-12 21:05:40,394 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:40,443 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:40,444 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:40,445 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:40,446 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:40,713 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:05:40,714 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:05:40,715 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:05:40,740 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:40,740 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:40,741 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:40,742 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:40,752 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:05:40,845 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562559165227
2026-05-12 21:05:40,872 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:05:40,872 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:05:40,873 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:05:40,874 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:05:40,874 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:05:41,042 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:05:41,353 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:05:41,358 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:05:41,651 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>, [], []).
2026-05-12 21:05:41,652 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:41,932 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:41,933 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:42,204 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:42,205 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:42,487 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>, []).
2026-05-12 21:05:42,488 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:42,753 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>, []).
2026-05-12 21:05:42,754 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:43,037 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:43,038 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:43,038 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:05:43,039 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:05:43,040 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:05:43,040 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:05:43,041 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:05:43,107 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:05:43,108 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:05:43,109 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:05:43,338 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:43,346 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109059002 -27.866162611 53.108837856 -27.865179172 53.108778557 -27.865190032 53.108999688 -27.866173476
2026-05-12 21:05:43,348 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109059002 -27.866162611 53.108837856 -27.865179172 53.108778557 -27.865190032 53.108999688 -27.866173476
2026-05-12 21:05:43,393 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:05:43,395 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:05:43,396 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:05:43,626 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:43,635 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102785902 -27.866243137 53.102564266 -27.865250753 53.102504558 -27.865261739 53.102726179 -27.866254127
2026-05-12 21:05:43,636 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102785902 -27.866243137 53.102564266 -27.865250753 53.102504558 -27.865261739 53.102726179 -27.866254127
2026-05-12 21:05:43,683 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:05:43,684 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:05:43,684 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:05:43,914 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:43,923 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106512918 -27.864490684 53.106259531 -27.863361471 53.106138082 -27.863383745 53.106391435 -27.864512968
2026-05-12 21:05:43,924 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106512918 -27.864490684 53.106259531 -27.863361471 53.106138082 -27.863383745 53.106391435 -27.864512968
2026-05-12 21:05:43,969 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:05:43,970 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:05:43,971 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:05:44,194 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:44,203 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107209685 -27.863091463 53.107101494 -27.862609913 53.106609471 -27.862700081 53.106717606 -27.863181649
2026-05-12 21:05:44,204 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107209685 -27.863091463 53.107101494 -27.862609913 53.106609471 -27.862700081 53.106717606 -27.863181649
2026-05-12 21:05:44,794 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:05:45,103 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:45,104 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:45,105 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:05:45,106 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:05:45,109 - stpipe.step - INFO - Step srctype done
2026-05-12 21:05:45,399 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:45,400 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:45,401 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:45,706 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:45,721 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:05:45,722 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:05:45,724 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:05:45,725 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:05:45,725 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:05:45,729 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:05:46,027 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:46,079 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:05:46,130 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:05:46,224 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:05:46,371 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:05:46,372 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:05:46,603 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:05:46,840 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:05:47,074 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:05:47,547 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:05:47,856 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:47,871 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:05:48,012 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:05:48,020 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:05:48,021 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:48,021 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:05:48,089 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:05:48,090 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:48,090 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:05:48,158 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:05:48,159 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:48,160 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:05:48,228 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:05:48,229 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:05:48,229 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:05:48,300 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:05:48,597 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:48,598 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:48,892 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_rate.fits>,).
2026-05-12 21:05:48,921 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:05:48,921 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:05:48,922 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:05:48,923 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:05:48,923 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:05:48,924 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:05:48,925 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:05:48,972 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:05:48,973 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:05:48,999 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:05:49,000 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:05:49,027 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:05:49,028 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:05:49,055 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:05:49,056 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:05:49,086 - stpipe.step - INFO - Step photom done
2026-05-12 21:05:49,749 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00004_nrs1_cal.fits>,).
2026-05-12 21:05:49,750 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:50,077 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00004_nrs1_cal.fits>,).
2026-05-12 21:05:50,336 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00004_nrs1_cal.fits
2026-05-12 21:05:51,213 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:51,221 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:05:51,222 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438829613321 arcsec.
2026-05-12 21:05:51,223 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:51,223 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:51,224 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:51,224 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:51,226 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:51,259 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:51,262 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:51,265 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:51,268 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:05:51,383 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108802448 -27.866164950 53.109028649 -27.866164950 53.109028649 -27.865158993 53.108802448 -27.865158993
2026-05-12 21:05:51,561 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:51,569 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:05:51,570 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123612962877 arcsec.
2026-05-12 21:05:51,571 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:51,572 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:51,572 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:51,573 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:51,574 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:51,606 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:51,610 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:51,612 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:51,615 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:05:51,730 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102529748 -27.866240784 53.102754288 -27.866240784 53.102754288 -27.865235361 53.102529748 -27.865235361
2026-05-12 21:05:52,265 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:52,274 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:05:52,276 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862482653791 arcsec.
2026-05-12 21:05:52,276 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:52,277 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:52,278 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:52,278 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:52,280 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:52,314 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:52,318 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:52,321 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:52,323 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:05:52,440 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106194212 -27.864499861 53.106451736 -27.864499861 53.106451736 -27.863352128 53.106194212 -27.863352128
2026-05-12 21:05:52,612 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:05:52,620 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:05:52,622 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738271767317 arcsec.
2026-05-12 21:05:52,623 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:05:52,623 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:05:52,624 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:05:52,624 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:05:52,626 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:52,652 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:05:52,654 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:52,656 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:52,658 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:05:52,772 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106852624 -27.863129640 53.106962097 -27.863129640 53.106962097 -27.862642249 53.106852624 -27.862642249
2026-05-12 21:05:53,051 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00004_nrs1_s2d.fits
2026-05-12 21:05:53,052 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:05:53,430 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00004_nrs1_s2d.fits>,).
2026-05-12 21:05:53,446 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:05:53,461 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:05:53,518 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:05:53,522 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:53,525 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:05:53,526 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:53,527 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:53,528 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:53,578 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:05:53,581 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:53,585 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:05:53,586 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:05:53,587 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:05:53,588 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:05:53,639 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:05:53,643 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:53,646 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:05:53,647 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:05:53,648 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:05:53,649 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:05:53,702 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:05:53,705 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:05:53,708 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:05:53,709 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:05:53,710 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:05:53,711 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:05:53,867 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00004_nrs1_x1d.fits
2026-05-12 21:05:53,868 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:05:53,869 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00004_nrs1
2026-05-12 21:05:53,871 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:05:53,872 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:05:54,353 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00004_nrs1_cal.fits
2026-05-12 21:05:54,354 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:05:54,355 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:05:54,377 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:05:54,390 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:54,399 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:05:54,409 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:05:54,432 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:05:54,433 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:05:54,434 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:05:54,435 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:05:54,436 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:05:54,437 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:05:54,437 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:05:54,438 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:05:54,443 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:05:54,443 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:54,444 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:54,445 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:54,446 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:54,447 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:54,448 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:54,449 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:54,450 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:05:54,450 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:05:54,451 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:05:54,452 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:05:54,453 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:05:54,454 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:05:54,454 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:05:54,455 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:05:54,456 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:05:54,457 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:05:54,458 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:05:54,459 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:05:54,459 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:05:54,460 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:05:54,463 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:05:54,465 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:05:54,791 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00005_nrs1_rate.fits',).
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00005_nrs1_rate.fits
2026-05-12 21:05:54,822 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:05:54,854 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00005_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:05:54,860 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:05:54,861 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:05:54,861 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:05:54,862 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:05:54,862 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:05:54,863 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:05:54,864 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:05:54,864 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:05:54,865 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:05:54,865 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:05:54,866 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:05:54,867 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:05:54,867 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:05:54,868 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:05:54,868 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:05:54,869 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:05:54,870 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:05:54,870 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:05:54,870 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:05:54,871 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:05:54,871 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:05:54,872 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:05:54,872 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:05:54,873 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:05:54,873 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:05:54,874 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:05:54,875 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:05:54,875 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:05:54,876 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:05:54,877 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:05:54,877 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:05:54,878 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:05:54,878 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:05:54,879 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:05:54,879 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:05:54,880 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:05:54,881 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00005_nrs1
2026-05-12 21:05:54,881 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00005_nrs1_rate.fits ...
2026-05-12 21:05:55,247 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:05:55,297 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:55,298 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:55,299 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:55,300 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:55,559 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:05:55,560 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:05:55,561 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:05:55,585 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:05:55,586 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:05:55,587 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:05:55,588 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:05:55,598 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:05:55,690 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562483786338
2026-05-12 21:05:55,716 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:05:55,717 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:05:55,717 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:05:55,718 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:05:55,719 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:05:55,880 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:05:56,178 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:05:56,183 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:05:56,525 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>, [], []).
2026-05-12 21:05:56,526 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:56,791 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:05:56,793 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:57,060 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:05:57,061 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:57,328 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>, []).
2026-05-12 21:05:57,329 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:57,601 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>, []).
2026-05-12 21:05:57,602 - stpipe.step - INFO - Step skipped.
2026-05-12 21:05:57,881 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:05:57,883 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:57,883 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:05:57,885 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:05:57,885 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:05:57,886 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:05:57,887 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:05:57,953 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:05:57,953 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:05:57,954 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:05:58,182 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:58,190 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109024346 -27.866267823 53.108803203 -27.865284383 53.108743904 -27.865295243 53.108965032 -27.866278687
2026-05-12 21:05:58,192 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109024346 -27.866267823 53.108803203 -27.865284383 53.108743904 -27.865295243 53.108965032 -27.866278687
2026-05-12 21:05:58,237 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:05:58,238 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:05:58,240 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:05:58,465 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:58,473 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102751240 -27.866348336 53.102529607 -27.865355951 53.102469899 -27.865366937 53.102691518 -27.866359326
2026-05-12 21:05:58,475 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102751240 -27.866348336 53.102529607 -27.865355951 53.102469899 -27.865366937 53.102691518 -27.866359326
2026-05-12 21:05:58,520 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:05:58,520 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:05:58,521 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:05:58,750 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:58,758 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106478264 -27.864595890 53.106224880 -27.863466677 53.106103431 -27.863488950 53.106356782 -27.864618174
2026-05-12 21:05:58,759 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106478264 -27.864595890 53.106224880 -27.863466677 53.106103431 -27.863488950 53.106356782 -27.864618174
2026-05-12 21:05:58,804 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:05:58,805 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:05:58,806 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:05:59,031 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:05:59,039 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107175036 -27.863196670 53.107066846 -27.862715121 53.106574823 -27.862805288 53.106682956 -27.863286856
2026-05-12 21:05:59,041 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107175036 -27.863196670 53.107066846 -27.862715121 53.106574823 -27.862805288 53.106682956 -27.863286856
2026-05-12 21:05:59,623 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:05:59,916 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:05:59,917 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:05:59,917 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:05:59,918 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:05:59,922 - stpipe.step - INFO - Step srctype done
2026-05-12 21:06:00,211 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:00,212 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:00,213 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:00,509 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:00,525 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:06:00,526 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:06:00,527 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:06:00,528 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:06:00,528 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:06:00,532 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:06:00,821 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:00,874 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:06:00,925 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:06:01,017 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:06:01,159 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:06:01,160 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:06:01,388 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:06:01,615 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:06:01,843 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:06:02,324 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:06:02,636 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:02,651 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:06:02,792 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:06:02,800 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:06:02,801 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:02,802 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:06:02,870 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:06:02,871 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:02,871 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:06:02,938 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:06:02,939 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:02,940 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:06:03,008 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:06:03,009 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:03,010 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:06:03,080 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:06:03,383 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:03,385 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:03,675 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_rate.fits>,).
2026-05-12 21:06:03,704 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:06:03,705 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:06:03,706 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:06:03,706 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:06:03,707 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:06:03,708 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:06:03,708 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:06:03,755 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:06:03,756 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:06:03,783 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:06:03,784 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:06:03,810 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:06:03,812 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:06:03,839 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:06:03,840 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:06:03,870 - stpipe.step - INFO - Step photom done
2026-05-12 21:06:04,550 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00005_nrs1_cal.fits>,).
2026-05-12 21:06:04,551 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:04,870 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00005_nrs1_cal.fits>,).
2026-05-12 21:06:05,131 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00005_nrs1_cal.fits
2026-05-12 21:06:05,996 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:06,004 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:06:06,006 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438763952637 arcsec.
2026-05-12 21:06:06,006 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:06,007 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:06,008 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:06,008 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:06,009 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:06,041 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:06,044 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:06,047 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:06,050 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:06,163 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108767795 -27.866270161 53.108993994 -27.866270161 53.108993994 -27.865264204 53.108767795 -27.865264204
2026-05-12 21:06:06,338 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:06,346 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:06:06,348 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123538219438 arcsec.
2026-05-12 21:06:06,348 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:06,349 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:06,349 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:06,350 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:06,351 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:06,383 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:06,386 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:06,389 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:06,391 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:06,505 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102495089 -27.866345983 53.102719627 -27.866345983 53.102719627 -27.865340559 53.102495089 -27.865340559
2026-05-12 21:06:07,035 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:07,043 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:06:07,045 - stcal.resample.resample - INFO - Output pixel scale: 0.1053086241097802 arcsec.
2026-05-12 21:06:07,045 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:07,046 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:07,046 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:07,047 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:07,048 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:07,082 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:07,085 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:07,088 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:07,091 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:07,206 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106159561 -27.864605068 53.106417082 -27.864605068 53.106417082 -27.863457334 53.106159561 -27.863457334
2026-05-12 21:06:07,374 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:07,382 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:06:07,383 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738204566116 arcsec.
2026-05-12 21:06:07,384 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:07,384 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:07,385 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:07,386 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:07,387 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:07,414 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:07,416 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:07,417 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:07,419 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:07,532 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106817976 -27.863234847 53.106927447 -27.863234847 53.106927447 -27.862747456 53.106817976 -27.862747456
2026-05-12 21:06:07,817 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00005_nrs1_s2d.fits
2026-05-12 21:06:07,818 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:06:08,198 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00005_nrs1_s2d.fits>,).
2026-05-12 21:06:08,215 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:06:08,229 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:06:08,285 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:06:08,289 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:08,293 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:06:08,294 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:08,295 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:08,296 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:08,346 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:06:08,349 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:08,353 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:06:08,354 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:08,355 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:08,356 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:08,406 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:06:08,410 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:08,413 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:06:08,414 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:06:08,415 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:06:08,416 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:06:08,467 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:06:08,470 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:08,473 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:06:08,474 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:06:08,475 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:06:08,475 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:06:08,633 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00005_nrs1_x1d.fits
2026-05-12 21:06:08,634 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:06:08,635 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00005_nrs1
2026-05-12 21:06:08,637 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:06:08,638 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:09,116 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00005_nrs1_cal.fits
2026-05-12 21:06:09,117 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:06:09,117 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:06:09,140 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:06:09,153 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:09,162 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:06:09,171 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:09,194 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:06:09,195 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:06:09,196 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:06:09,197 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:06:09,198 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:06:09,200 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:06:09,200 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:06:09,202 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:06:09,206 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:06:09,207 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:09,207 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:09,208 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:09,209 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:09,210 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:09,211 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:09,212 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:06:09,213 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:06:09,214 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:06:09,215 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:09,216 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:06:09,217 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:06:09,217 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:06:09,218 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:06:09,219 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:09,220 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:09,221 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:06:09,222 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:09,222 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:06:09,223 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:09,224 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:09,225 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:06:09,227 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00006_nrs1_rate.fits
2026-05-12 21:06:09,550 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00006_nrs1_rate.fits',).
2026-05-12 21:06:09,582 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:06:09,614 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00006_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:06:09,620 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:06:09,621 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:06:09,621 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:06:09,622 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:06:09,622 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:06:09,623 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:06:09,623 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:06:09,624 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:06:09,625 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:06:09,626 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:06:09,626 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:06:09,627 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:06:09,628 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:06:09,628 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:06:09,628 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:06:09,629 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:06:09,630 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:06:09,630 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:06:09,631 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:06:09,631 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:06:09,632 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:06:09,632 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:06:09,633 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:06:09,634 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:06:09,634 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:06:09,634 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:06:09,635 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:06:09,636 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:06:09,636 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:06:09,637 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:06:09,637 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:06:09,638 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:06:09,638 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:06:09,639 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:06:09,640 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:06:09,640 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:06:09,641 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00006_nrs1
2026-05-12 21:06:09,641 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00006_nrs1_rate.fits ...
2026-05-12 21:06:10,025 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:10,075 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:10,076 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:10,077 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:10,078 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:10,346 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:06:10,347 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:06:10,348 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:06:10,372 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:10,373 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:10,374 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:10,375 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:10,385 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:06:10,478 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562421081775
2026-05-12 21:06:10,505 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:06:10,505 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:06:10,506 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:06:10,507 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:06:10,508 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:06:10,670 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:06:10,979 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:06:10,984 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:06:11,282 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>, [], []).
2026-05-12 21:06:11,283 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:11,562 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:11,563 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:11,886 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:11,887 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:12,163 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>, []).
2026-05-12 21:06:12,164 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:12,418 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>, []).
2026-05-12 21:06:12,419 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:12,669 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:12,670 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:12,671 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:06:12,671 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:06:12,672 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:06:12,672 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:06:12,673 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:06:12,738 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:06:12,739 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:06:12,739 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:06:12,969 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:12,977 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109100666 -27.866238475 53.108879522 -27.865255036 53.108820223 -27.865265896 53.109041353 -27.866249340
2026-05-12 21:06:12,979 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109100666 -27.866238475 53.108879522 -27.865255036 53.108820223 -27.865265896 53.109041353 -27.866249340
2026-05-12 21:06:13,025 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:06:13,026 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:06:13,027 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:06:13,257 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:13,265 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102827562 -27.866318995 53.102605928 -27.865326610 53.102546219 -27.865337596 53.102767840 -27.866329985
2026-05-12 21:06:13,266 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102827562 -27.866318995 53.102605928 -27.865326610 53.102546219 -27.865337596 53.102767840 -27.866329985
2026-05-12 21:06:13,311 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:06:13,312 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:06:13,312 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:06:13,541 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:13,550 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106554583 -27.864566546 53.106301198 -27.863437333 53.106179748 -27.863459606 53.106433100 -27.864588829
2026-05-12 21:06:13,551 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106554583 -27.864566546 53.106301198 -27.863437333 53.106179748 -27.863459606 53.106433100 -27.864588829
2026-05-12 21:06:13,597 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:06:13,597 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:06:13,598 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:06:13,823 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:13,832 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107251352 -27.863167325 53.107143162 -27.862685776 53.106651139 -27.862775943 53.106759273 -27.863257511
2026-05-12 21:06:13,834 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107251352 -27.863167325 53.107143162 -27.862685776 53.106651139 -27.862775943 53.106759273 -27.863257511
2026-05-12 21:06:14,429 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:06:14,712 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:14,713 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:14,714 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:06:14,715 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:06:14,718 - stpipe.step - INFO - Step srctype done
2026-05-12 21:06:15,008 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:15,009 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:15,010 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:15,292 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:15,307 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:06:15,308 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:06:15,309 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:06:15,310 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:06:15,311 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:06:15,314 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:06:15,585 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:15,637 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:06:15,687 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:06:15,777 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:06:15,916 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:06:15,917 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:06:16,142 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:06:16,364 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:06:16,588 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:06:17,049 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:06:17,335 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:17,350 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:06:17,489 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:06:17,497 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:06:17,498 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:17,499 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:06:17,565 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:06:17,566 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:17,567 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:06:17,634 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:06:17,635 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:17,636 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:06:17,704 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:06:17,705 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:17,706 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:06:17,777 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:06:18,056 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:18,057 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:18,356 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_rate.fits>,).
2026-05-12 21:06:18,385 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:06:18,386 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:06:18,387 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:06:18,388 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:06:18,388 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:06:18,389 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:06:18,389 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:06:18,436 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:06:18,437 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:06:18,464 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:06:18,465 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:06:18,492 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:06:18,493 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:06:18,520 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:06:18,520 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:06:18,550 - stpipe.step - INFO - Step photom done
2026-05-12 21:06:19,211 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00006_nrs1_cal.fits>,).
2026-05-12 21:06:19,213 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:19,574 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00006_nrs1_cal.fits>,).
2026-05-12 21:06:19,836 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00006_nrs1_cal.fits
2026-05-12 21:06:20,712 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:20,721 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:06:20,722 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438690530491 arcsec.
2026-05-12 21:06:20,724 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:20,724 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:20,725 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:20,725 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:20,726 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:20,759 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:20,762 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:20,765 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:20,768 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:20,883 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108844114 -27.866240814 53.109070314 -27.866240814 53.109070314 -27.865234857 53.108844114 -27.865234857
2026-05-12 21:06:21,061 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:21,069 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:06:21,070 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123460572883 arcsec.
2026-05-12 21:06:21,071 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:21,072 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:21,072 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:21,073 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:21,074 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:21,106 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:21,109 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:21,112 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:21,115 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:21,230 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102571410 -27.866316642 53.102795949 -27.866316642 53.102795949 -27.865311218 53.102571410 -27.865311218
2026-05-12 21:06:21,758 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:21,767 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:06:21,768 - stcal.resample.resample - INFO - Output pixel scale: 0.1053086233039015 arcsec.
2026-05-12 21:06:21,769 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:21,769 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:21,770 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:21,771 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:21,772 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:21,806 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:21,809 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:21,812 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:21,815 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:21,930 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106235878 -27.864575723 53.106493401 -27.864575723 53.106493401 -27.863427989 53.106235878 -27.863427989
2026-05-12 21:06:22,097 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:22,105 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:06:22,106 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738139652964 arcsec.
2026-05-12 21:06:22,107 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:22,107 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:22,108 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:22,109 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:22,110 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:22,136 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:22,138 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:22,139 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:22,141 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:22,252 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106894292 -27.863205502 53.107003764 -27.863205502 53.107003764 -27.862718111 53.106894292 -27.862718111
2026-05-12 21:06:22,525 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00006_nrs1_s2d.fits
2026-05-12 21:06:22,526 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:06:22,906 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00006_nrs1_s2d.fits>,).
2026-05-12 21:06:22,922 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:06:22,936 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:06:22,993 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:06:22,997 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:23,000 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:06:23,001 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:23,002 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:23,004 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:23,055 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:06:23,058 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:23,061 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:06:23,062 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:23,063 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:23,064 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:23,115 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:06:23,118 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:23,121 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:06:23,122 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:06:23,123 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:06:23,124 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:06:23,174 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:06:23,178 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:23,181 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:06:23,181 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:06:23,182 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:06:23,183 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:06:23,345 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00006_nrs1_x1d.fits
2026-05-12 21:06:23,346 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:06:23,347 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00006_nrs1
2026-05-12 21:06:23,349 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:06:23,349 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:23,836 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00006_nrs1_cal.fits
2026-05-12 21:06:23,836 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:06:23,837 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:06:23,861 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:06:23,874 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:23,883 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:06:23,893 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:23,916 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:06:23,917 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:06:23,919 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:06:23,919 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:06:23,920 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:06:23,921 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:06:23,922 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:06:23,923 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:06:23,927 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:06:23,928 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:23,928 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:23,929 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:23,930 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:23,931 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:23,932 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:23,934 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:06:23,935 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:06:23,935 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:06:23,937 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:23,937 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:06:23,938 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:06:23,940 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:06:23,941 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:06:23,942 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:23,943 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:23,944 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:06:23,944 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:23,946 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:06:23,946 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:23,947 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:23,949 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:06:23,950 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00007_nrs1_rate.fits
2026-05-12 21:06:24,240 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00007_nrs1_rate.fits',).
2026-05-12 21:06:24,270 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:06:24,302 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00007_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:06:24,307 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:06:24,308 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:06:24,309 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:06:24,309 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:06:24,309 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:06:24,310 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:06:24,311 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:06:24,311 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:06:24,312 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:06:24,313 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:06:24,313 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:06:24,314 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:06:24,315 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:06:24,315 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:06:24,316 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:06:24,316 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:06:24,317 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:06:24,318 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:06:24,318 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:06:24,318 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:06:24,319 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:06:24,319 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:06:24,320 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:06:24,321 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:06:24,321 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:06:24,322 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:06:24,322 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:06:24,323 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:06:24,324 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:06:24,324 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:06:24,324 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:06:24,325 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:06:24,325 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:06:24,326 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:06:24,327 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:06:24,327 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:06:24,328 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00007_nrs1
2026-05-12 21:06:24,328 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00007_nrs1_rate.fits ...
2026-05-12 21:06:24,690 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:24,740 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:24,741 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:24,742 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:24,743 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:25,000 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:06:25,001 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:06:25,002 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:06:25,026 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:25,027 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:25,028 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:25,029 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:25,039 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:06:25,131 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.999956235804368
2026-05-12 21:06:25,157 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:06:25,158 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:06:25,158 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:06:25,159 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:06:25,160 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:06:25,322 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:06:25,624 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:06:25,629 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:06:25,920 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>, [], []).
2026-05-12 21:06:25,922 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:26,204 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:26,205 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:26,490 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:26,491 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:26,756 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>, []).
2026-05-12 21:06:26,757 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:27,021 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>, []).
2026-05-12 21:06:27,022 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:27,277 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:27,278 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:27,280 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:06:27,281 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:06:27,281 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:06:27,282 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:06:27,283 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:06:27,349 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:06:27,350 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:06:27,351 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:06:27,579 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:27,587 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.109008158 -27.866195017 53.108787016 -27.865211577 53.108727716 -27.865222438 53.108948844 -27.866205882
2026-05-12 21:06:27,589 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.109008158 -27.866195017 53.108787016 -27.865211577 53.108727716 -27.865222438 53.108948844 -27.866205882
2026-05-12 21:06:27,634 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:06:27,635 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:06:27,637 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:06:27,866 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:27,874 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102735056 -27.866275527 53.102513424 -27.865283142 53.102453715 -27.865294128 53.102675334 -27.866286517
2026-05-12 21:06:27,876 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102735056 -27.866275527 53.102513424 -27.865283142 53.102453715 -27.865294128 53.102675334 -27.866286517
2026-05-12 21:06:27,922 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:06:27,922 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:06:27,924 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:06:28,151 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:28,159 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106462079 -27.864523083 53.106208696 -27.863393870 53.106087246 -27.863416143 53.106340596 -27.864545367
2026-05-12 21:06:28,160 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106462079 -27.864523083 53.106208696 -27.863393870 53.106087246 -27.863416143 53.106340596 -27.864545367
2026-05-12 21:06:28,204 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:06:28,205 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:06:28,206 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:06:28,431 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:28,439 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107158851 -27.863123864 53.107050661 -27.862642314 53.106558638 -27.862732481 53.106666771 -27.863214049
2026-05-12 21:06:28,440 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107158851 -27.863123864 53.107050661 -27.862642314 53.106558638 -27.862732481 53.106666771 -27.863214049
2026-05-12 21:06:29,035 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:06:29,332 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:29,333 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:29,333 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:06:29,334 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:06:29,338 - stpipe.step - INFO - Step srctype done
2026-05-12 21:06:29,626 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:29,627 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:29,629 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:29,923 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:29,938 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:06:29,939 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:06:29,940 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:06:29,941 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:06:29,942 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:06:29,945 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:06:30,245 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:30,296 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:06:30,347 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:06:30,440 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:06:30,583 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:06:30,584 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:06:30,810 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:06:31,039 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:06:31,267 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:06:31,745 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:06:32,051 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:32,066 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:06:32,206 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:06:32,213 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:06:32,214 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:32,215 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:06:32,282 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:06:32,283 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:32,283 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:06:32,350 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:06:32,351 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:32,351 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:06:32,419 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:06:32,419 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:32,420 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:06:32,490 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:06:32,785 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:32,786 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:33,071 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_rate.fits>,).
2026-05-12 21:06:33,099 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:06:33,100 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:06:33,101 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:06:33,102 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:06:33,102 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:06:33,103 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:06:33,103 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:06:33,150 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:06:33,151 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:06:33,178 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:06:33,179 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:06:33,205 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:06:33,206 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:06:33,232 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:06:33,233 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:06:33,263 - stpipe.step - INFO - Step photom done
2026-05-12 21:06:33,908 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00007_nrs1_cal.fits>,).
2026-05-12 21:06:33,909 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:34,227 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00007_nrs1_cal.fits>,).
2026-05-12 21:06:34,484 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00007_nrs1_cal.fits
2026-05-12 21:06:35,330 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:35,338 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:06:35,339 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438620183582 arcsec.
2026-05-12 21:06:35,340 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:35,340 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:35,341 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:35,342 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:35,343 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:35,375 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:35,379 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:35,382 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:35,384 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:35,499 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108751608 -27.866197356 53.108977805 -27.866197356 53.108977805 -27.865191398 53.108751608 -27.865191398
2026-05-12 21:06:35,675 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:35,683 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:06:35,684 - stcal.resample.resample - INFO - Output pixel scale: 0.1054112339323897 arcsec.
2026-05-12 21:06:35,685 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:35,685 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:35,686 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:35,686 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:35,688 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:35,719 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:35,722 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:35,725 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:35,728 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:35,842 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102478906 -27.866273174 53.102703442 -27.866273174 53.102703442 -27.865267750 53.102478906 -27.865267750
2026-05-12 21:06:36,369 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:36,377 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:06:36,379 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862259725361 arcsec.
2026-05-12 21:06:36,379 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:36,380 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:36,381 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:36,381 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:36,382 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:36,416 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:36,420 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:36,423 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:36,426 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:36,541 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106143376 -27.864532261 53.106400897 -27.864532261 53.106400897 -27.863384527 53.106143376 -27.863384527
2026-05-12 21:06:36,714 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:36,722 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:06:36,724 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738056103735 arcsec.
2026-05-12 21:06:36,724 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:36,725 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:36,725 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:36,726 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:36,727 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:36,755 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:36,757 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:36,758 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:36,760 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:36,873 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106801791 -27.863162041 53.106911263 -27.863162041 53.106911263 -27.862674649 53.106801791 -27.862674649
2026-05-12 21:06:37,148 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00007_nrs1_s2d.fits
2026-05-12 21:06:37,149 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:06:37,524 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00007_nrs1_s2d.fits>,).
2026-05-12 21:06:37,541 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:06:37,555 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:06:37,611 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:06:37,614 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:37,617 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:06:37,618 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:37,619 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:37,620 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:37,670 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:06:37,674 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:37,677 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:06:37,678 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:37,679 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:37,680 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:37,730 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:06:37,733 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:37,736 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:06:37,737 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:06:37,738 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:06:37,739 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:06:37,790 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:06:37,793 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:37,796 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:06:37,797 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:06:37,798 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:06:37,799 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:06:37,954 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00007_nrs1_x1d.fits
2026-05-12 21:06:37,955 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:06:37,956 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00007_nrs1
2026-05-12 21:06:37,958 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:06:37,959 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:38,442 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00007_nrs1_cal.fits
2026-05-12 21:06:38,443 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:06:38,443 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
2026-05-12 21:06:38,467 - stpipe.step - INFO - PARS-CLEANFLICKERNOISESTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-cleanflickernoisestep_0001.asdf
2026-05-12 21:06:38,479 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:38,488 - CRDS - ERROR - Error determining best reference for 'pars-targcentroidstep' = Unknown reference type 'pars-targcentroidstep'
2026-05-12 21:06:38,498 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:06:38,520 - stpipe.step - INFO - Spec2Pipeline instance created.
2026-05-12 21:06:38,521 - stpipe.step - INFO - AssignWcsStep instance created.
2026-05-12 21:06:38,522 - stpipe.step - INFO - BadpixSelfcalStep instance created.
2026-05-12 21:06:38,523 - stpipe.step - INFO - MSAFlagOpenStep instance created.
2026-05-12 21:06:38,524 - stpipe.step - INFO - CleanFlickerNoiseStep instance created.
2026-05-12 21:06:38,525 - stpipe.step - INFO - BackgroundStep instance created.
2026-05-12 21:06:38,526 - stpipe.step - INFO - ImprintStep instance created.
2026-05-12 21:06:38,527 - stpipe.step - INFO - Extract2dStep instance created.
2026-05-12 21:06:38,531 - stpipe.step - INFO - MasterBackgroundMosStep instance created.
2026-05-12 21:06:38,531 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:38,532 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:38,533 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:38,534 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:38,535 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:38,536 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:38,537 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:06:38,538 - stpipe.step - INFO - TargCentroidStep instance created.
2026-05-12 21:06:38,538 - stpipe.step - INFO - WavecorrStep instance created.
2026-05-12 21:06:38,539 - stpipe.step - INFO - FlatFieldStep instance created.
2026-05-12 21:06:38,540 - stpipe.step - INFO - SourceTypeStep instance created.
2026-05-12 21:06:38,541 - stpipe.step - INFO - StraylightStep instance created.
2026-05-12 21:06:38,543 - stpipe.step - INFO - FringeStep instance created.
2026-05-12 21:06:38,544 - stpipe.step - INFO - ResidualFringeStep instance created.
2026-05-12 21:06:38,544 - stpipe.step - INFO - PathLossStep instance created.
2026-05-12 21:06:38,545 - stpipe.step - INFO - BarShadowStep instance created.
2026-05-12 21:06:38,546 - stpipe.step - INFO - WfssContamStep instance created.
2026-05-12 21:06:38,547 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:06:38,548 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:06:38,549 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:06:38,550 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:06:38,551 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:06:38,553 - stpipe.step - INFO - Extract1dStep instance created.
Stage 2 has been completed!
Applying Stage 2 Corrections & Calibrations to: data/jw01216005001_03103_00008_nrs1_rate.fits
2026-05-12 21:06:38,886 - stpipe.step - INFO - Step Spec2Pipeline running with args ('data/jw01216005001_03103_00008_nrs1_rate.fits',).
2026-05-12 21:06:38,916 - stpipe.step - INFO - Step Spec2Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage2/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_bsub: False
fail_on_exception: True
save_wfss_esec: False
steps:
assign_wcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sip_approx: True
sip_max_pix_error: 0.01
sip_degree: None
sip_max_inv_pix_error: 0.01
sip_inv_degree: None
sip_npoints: 12
slit_y_low: -0.55
slit_y_high: 0.55
nrs_ifu_slice_wcs: False
badpix_selfcal:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
flagfrac_lower: 0.001
flagfrac_upper: 0.001
kernel_size: 15
force_single: False
save_flagged_bkg: False
msa_flagging:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_flicker_noise:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
autoparam: False
fit_method: median
fit_by_channel: False
background_method: None
background_box_size: None
mask_science_regions: False
apply_flat_field: False
n_sigma: 1.5
fit_histogram: False
single_mask: True
user_mask: None
save_mask: False
save_background: False
save_noise: False
bkg_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
bkg_list: None
save_combined_background: False
sigma: 3.0
maxiters: None
soss_source_percentile: 35.0
soss_bkg_percentile: None
wfss_mmag_extract: None
wfss_mask: None
wfss_maxiter: 5
wfss_rms_stop: 0.0
wfss_outlier_percent: 1.0
imprint_subtract:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
extract_2d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
slit_names:
- S200A1
- S200A2
- S400A1
- S1600A1
source_ids: None
source_ra: None
source_dec: None
source_max_sep: 2.0
extract_orders: None
grism_objects: None
tsgrism_extract_height: None
wfss_extract_half_height: 5
wfss_mmag_extract: None
wfss_nbright: 1000
master_background_mos:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
sigma_clip: 3.0
median_kernel: 1
force_subtract: False
save_background: False
user_background: None
inverse: False
steps:
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: None
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
targ_centroid:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
ta_file: None
wavecorr:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
flat_field:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
save_interpolated_flat: False
user_supplied_flat: None
inverse: False
srctype:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
source_type: None
straylight:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
clean_showers: False
shower_plane: 3
shower_x_stddev: 18.0
shower_y_stddev: 5.0
shower_low_reject: 0.1
shower_high_reject: 99.9
save_shower_model: False
fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
residual_fringe:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: residual_fringe
search_output_file: False
input_dir: ''
save_intermediate_results: False
ignore_region_min: None
ignore_region_max: None
pathloss:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
user_slit_loc: None
barshadow:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
wfss_contam:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
save_simulated_image: False
save_contam_images: False
maximum_cores: '1'
orders: None
magnitude_limit: None
wl_oversample: 2
max_pixels_per_chunk: 5000
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
2026-05-12 21:06:38,947 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'jw01216005001_03103_00008_nrs1_rate.fits' reftypes = ['apcorr', 'area', 'barshadow', 'bkg', 'camera', 'collimator', 'cubepar', 'dflat', 'disperser', 'distortion', 'extract1d', 'fflat', 'filteroffset', 'flat', 'fore', 'fpa', 'fringe', 'ifufore', 'ifupost', 'ifuslicer', 'mrsxartcorr', 'msa', 'msaoper', 'ote', 'pastasoss', 'pathloss', 'photom', 'psf', 'regions', 'sflat', 'speckernel', 'specprofile', 'specwcs', 'wavecorr', 'wavelengthrange']
2026-05-12 21:06:38,953 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:06:38,954 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:06:38,954 - stpipe.pipeline - INFO - Prefetch for BARSHADOW reference file is 'N/A'.
2026-05-12 21:06:38,955 - stpipe.pipeline - INFO - Prefetch for BKG reference file is 'N/A'.
2026-05-12 21:06:38,955 - stpipe.pipeline - INFO - Prefetch for CAMERA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf'.
2026-05-12 21:06:38,956 - stpipe.pipeline - INFO - Prefetch for COLLIMATOR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf'.
2026-05-12 21:06:38,956 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:06:38,957 - stpipe.pipeline - INFO - Prefetch for DFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits'.
2026-05-12 21:06:38,958 - stpipe.pipeline - INFO - Prefetch for DISPERSER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf'.
2026-05-12 21:06:38,958 - stpipe.pipeline - INFO - Prefetch for DISTORTION reference file is 'N/A'.
2026-05-12 21:06:38,959 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:06:38,959 - stpipe.pipeline - INFO - Prefetch for FFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits'.
2026-05-12 21:06:38,960 - stpipe.pipeline - INFO - Prefetch for FILTEROFFSET reference file is 'N/A'.
2026-05-12 21:06:38,960 - stpipe.pipeline - INFO - Prefetch for FLAT reference file is 'N/A'.
2026-05-12 21:06:38,961 - stpipe.pipeline - INFO - Prefetch for FORE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf'.
2026-05-12 21:06:38,962 - stpipe.pipeline - INFO - Prefetch for FPA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf'.
2026-05-12 21:06:38,962 - stpipe.pipeline - INFO - Prefetch for FRINGE reference file is 'N/A'.
2026-05-12 21:06:38,963 - stpipe.pipeline - INFO - Prefetch for IFUFORE reference file is 'N/A'.
2026-05-12 21:06:38,963 - stpipe.pipeline - INFO - Prefetch for IFUPOST reference file is 'N/A'.
2026-05-12 21:06:38,964 - stpipe.pipeline - INFO - Prefetch for IFUSLICER reference file is 'N/A'.
2026-05-12 21:06:38,964 - stpipe.pipeline - INFO - Prefetch for MRSXARTCORR reference file is 'N/A'.
2026-05-12 21:06:38,964 - stpipe.pipeline - INFO - Prefetch for MSA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf'.
2026-05-12 21:06:38,966 - stpipe.pipeline - INFO - Prefetch for MSAOPER reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msaoper_0001.json'.
2026-05-12 21:06:38,966 - stpipe.pipeline - INFO - Prefetch for OTE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf'.
2026-05-12 21:06:38,967 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:06:38,967 - stpipe.pipeline - INFO - Prefetch for PATHLOSS reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits'.
2026-05-12 21:06:38,968 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:06:38,969 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:06:38,969 - stpipe.pipeline - INFO - Prefetch for REGIONS reference file is 'N/A'.
2026-05-12 21:06:38,969 - stpipe.pipeline - INFO - Prefetch for SFLAT reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits'.
2026-05-12 21:06:38,970 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:06:38,971 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:06:38,971 - stpipe.pipeline - INFO - Prefetch for SPECWCS reference file is 'N/A'.
2026-05-12 21:06:38,972 - stpipe.pipeline - INFO - Prefetch for WAVECORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf'.
2026-05-12 21:06:38,972 - stpipe.pipeline - INFO - Prefetch for WAVELENGTHRANGE reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf'.
2026-05-12 21:06:38,973 - jwst.pipeline.calwebb_spec2 - INFO - Starting calwebb_spec2 ...
2026-05-12 21:06:38,974 - jwst.pipeline.calwebb_spec2 - INFO - Processing product data/jw01216005001_03103_00008_nrs1
2026-05-12 21:06:38,974 - jwst.pipeline.calwebb_spec2 - INFO - Working on input data/jw01216005001_03103_00008_nrs1_rate.fits ...
2026-05-12 21:06:39,358 - stpipe.step - INFO - Step assign_wcs running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:39,409 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:39,410 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:39,410 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:39,411 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:39,677 - jwst.assign_wcs.nirspec - INFO - Removing slit S200B1 from the list of open slits because the WCS bounding_box is completely outside the detector.
2026-05-12 21:06:39,679 - jwst.assign_wcs.nirspec - INFO - Slits projected on detector NRS1: ['S200A1', 'S200A2', 'S400A1', 'S1600A1']
2026-05-12 21:06:39,679 - jwst.assign_wcs.nirspec - INFO - Computing WCS for 4 open slitlets
2026-05-12 21:06:39,704 - jwst.assign_wcs.nirspec - INFO - gwa_ytilt is 0.0319593772 deg
2026-05-12 21:06:39,704 - jwst.assign_wcs.nirspec - INFO - gwa_xtilt is 0.336634219 deg
2026-05-12 21:06:39,705 - jwst.assign_wcs.nirspec - INFO - theta_y correction: 0.0036671707661459626 deg
2026-05-12 21:06:39,706 - jwst.assign_wcs.nirspec - INFO - theta_x correction: 0.00015267249992373364 deg
2026-05-12 21:06:39,717 - jwst.assign_wcs.nirspec - INFO - SPORDER= 0, wrange=[6e-07, 5.3e-06]
2026-05-12 21:06:39,811 - jwst.assign_wcs.nirspec - INFO - Applied Barycentric velocity correction : 0.9999562289001956
2026-05-12 21:06:39,838 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 1
2026-05-12 21:06:39,839 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 2
2026-05-12 21:06:39,839 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 3
2026-05-12 21:06:39,840 - jwst.assign_wcs.nirspec - INFO - There are 0 open slits in quadrant 4
2026-05-12 21:06:39,841 - jwst.assign_wcs.nirspec - INFO - There are 4 open slits in quadrant 5
2026-05-12 21:06:40,008 - jwst.assign_wcs.nirspec - INFO - Created a NIRSPEC nrs_fixedslit pipeline with references {'distortion': None, 'filteroffset': None, 'specwcs': None, 'regions': None, 'wavelengthrange': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavelengthrange_0006.asdf', 'camera': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_camera_0008.asdf', 'collimator': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_collimator_0008.asdf', 'disperser': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_disperser_0065.asdf', 'fore': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fore_0054.asdf', 'fpa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fpa_0009.asdf', 'msa': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_msa_0009.asdf', 'ote': '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_ote_0011.asdf', 'ifupost': None, 'ifufore': None, 'ifuslicer': None}
2026-05-12 21:06:40,319 - jwst.assign_wcs.assign_wcs - INFO - COMPLETED assign_wcs
2026-05-12 21:06:40,324 - stpipe.step - INFO - Step assign_wcs done
2026-05-12 21:06:40,620 - stpipe.step - INFO - Step badpix_selfcal running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>, [], []).
2026-05-12 21:06:40,621 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:40,898 - stpipe.step - INFO - Step msa_flagging running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:40,899 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:41,183 - stpipe.step - INFO - Step clean_flicker_noise running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:41,184 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:41,465 - stpipe.step - INFO - Step imprint_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>, []).
2026-05-12 21:06:41,466 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:41,747 - stpipe.step - INFO - Step bkg_subtract running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>, []).
2026-05-12 21:06:41,748 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:42,033 - stpipe.step - INFO - Step extract_2d running with args (<IFUImageModel(2048, 2048) from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:42,034 - jwst.extract_2d.extract_2d - INFO - EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:42,034 - jwst.extract_2d.nirspec - INFO - Slits selected:
2026-05-12 21:06:42,035 - jwst.extract_2d.nirspec - INFO - Name: S200A1, source_id: 1
2026-05-12 21:06:42,036 - jwst.extract_2d.nirspec - INFO - Name: S200A2, source_id: 2
2026-05-12 21:06:42,036 - jwst.extract_2d.nirspec - INFO - Name: S400A1, source_id: 3
2026-05-12 21:06:42,037 - jwst.extract_2d.nirspec - INFO - Name: S1600A1, source_id: 4
2026-05-12 21:06:42,103 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A1
2026-05-12 21:06:42,104 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1083 1516
2026-05-12 21:06:42,105 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1058 1097
2026-05-12 21:06:42,348 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:42,357 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108970175 -27.866247278 53.108749030 -27.865263838 53.108689731 -27.865274699 53.108910861 -27.866258142
2026-05-12 21:06:42,358 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.108970175 -27.866247278 53.108749030 -27.865263838 53.108689731 -27.865274699 53.108910861 -27.866258142
2026-05-12 21:06:42,406 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S200A2
2026-05-12 21:06:42,407 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 891 1326
2026-05-12 21:06:42,409 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 1022 1062
2026-05-12 21:06:42,645 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:42,654 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102697070 -27.866327799 53.102475435 -27.865335415 53.102415727 -27.865346401 53.102637348 -27.866338790
2026-05-12 21:06:42,655 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.102697070 -27.866327799 53.102475435 -27.865335415 53.102415727 -27.865346401 53.102637348 -27.866338790
2026-05-12 21:06:42,703 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S400A1
2026-05-12 21:06:42,704 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1024 1458
2026-05-12 21:06:42,704 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 982 1026
2026-05-12 21:06:42,940 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:42,949 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106424090 -27.864575349 53.106170704 -27.863446136 53.106049255 -27.863468409 53.106302607 -27.864597632
2026-05-12 21:06:42,950 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.106424090 -27.864575349 53.106170704 -27.863446136 53.106049255 -27.863468409 53.106302607 -27.864597632
2026-05-12 21:06:42,999 - jwst.extract_2d.nirspec - INFO - Name of subarray extracted: S1600A1
2026-05-12 21:06:43,000 - jwst.extract_2d.nirspec - INFO - Subarray x-extents are: 1055 1486
2026-05-12 21:06:43,000 - jwst.extract_2d.nirspec - INFO - Subarray y-extents are: 962 983
2026-05-12 21:06:43,234 - jwst.extract_2d.nirspec - INFO - set slit_attributes completed
2026-05-12 21:06:43,243 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.107120859 -27.863176128 53.107012668 -27.862694578 53.106520645 -27.862784746 53.106628779 -27.863266314
2026-05-12 21:06:43,244 - jwst.extract_2d.nirspec - INFO - Updated S_REGION to POLYGON ICRS 53.107120859 -27.863176128 53.107012668 -27.862694578 53.106520645 -27.862784746 53.106628779 -27.863266314
2026-05-12 21:06:43,844 - stpipe.step - INFO - Step extract_2d done
2026-05-12 21:06:44,145 - stpipe.step - INFO - Step srctype running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:44,146 - jwst.srctype.srctype - INFO - Input EXP_TYPE is NRS_FIXEDSLIT
2026-05-12 21:06:44,147 - jwst.srctype.srctype - INFO - Input SRCTYAPT = EXTENDED
2026-05-12 21:06:44,147 - jwst.srctype.srctype - INFO - Using input source type = EXTENDED
2026-05-12 21:06:44,151 - stpipe.step - INFO - Step srctype done
2026-05-12 21:06:44,446 - stpipe.step - INFO - Step master_background_mos running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:44,447 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:44,448 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:44,752 - stpipe.step - INFO - Step wavecorr running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:44,767 - jwst.wavecorr.wavecorr_step - INFO - Using WAVECORR reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_wavecorr_0003.asdf
2026-05-12 21:06:44,768 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A1
2026-05-12 21:06:44,769 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S200A2
2026-05-12 21:06:44,770 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S400A1
2026-05-12 21:06:44,771 - jwst.wavecorr.wavecorr - INFO - Detected a EXTENDED source type in slit S1600A1
2026-05-12 21:06:44,774 - stpipe.step - INFO - Step wavecorr done
2026-05-12 21:06:45,073 - stpipe.step - INFO - Step flat_field running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:45,128 - jwst.flatfield.flat_field_step - INFO - No reference found for type FLAT
2026-05-12 21:06:45,180 - jwst.flatfield.flat_field_step - INFO - Using FFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_fflat_0155.fits
2026-05-12 21:06:45,278 - jwst.flatfield.flat_field_step - INFO - Using SFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_sflat_0153.fits
2026-05-12 21:06:45,424 - jwst.flatfield.flat_field_step - INFO - Using DFLAT reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_dflat_0001.fits
2026-05-12 21:06:45,426 - jwst.flatfield.flat_field - INFO - Working on slit S200A1
2026-05-12 21:06:45,656 - jwst.flatfield.flat_field - INFO - Working on slit S200A2
2026-05-12 21:06:45,888 - jwst.flatfield.flat_field - INFO - Working on slit S400A1
2026-05-12 21:06:46,122 - jwst.flatfield.flat_field - INFO - Working on slit S1600A1
2026-05-12 21:06:46,606 - stpipe.step - INFO - Step flat_field done
2026-05-12 21:06:46,915 - stpipe.step - INFO - Step pathloss running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:46,930 - jwst.pathloss.pathloss_step - INFO - Using PATHLOSS reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pathloss_0011.fits
2026-05-12 21:06:47,073 - jwst.pathloss.pathloss - INFO - Input exposure type is NRS_FIXEDSLIT
2026-05-12 21:06:47,082 - jwst.pathloss.pathloss - INFO - Working on slit S200A1
2026-05-12 21:06:47,082 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:47,083 - jwst.pathloss.pathloss - INFO - Using aperture S200A1
2026-05-12 21:06:47,152 - jwst.pathloss.pathloss - INFO - Working on slit S200A2
2026-05-12 21:06:47,153 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:47,154 - jwst.pathloss.pathloss - INFO - Using aperture S200A2
2026-05-12 21:06:47,222 - jwst.pathloss.pathloss - INFO - Working on slit S400A1
2026-05-12 21:06:47,223 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:47,224 - jwst.pathloss.pathloss - INFO - Using aperture S400A1
2026-05-12 21:06:47,293 - jwst.pathloss.pathloss - INFO - Working on slit S1600A1
2026-05-12 21:06:47,294 - jwst.pathloss.pathloss - INFO - Using source_xpos, source_ypos = (0.0, 0.0)
2026-05-12 21:06:47,295 - jwst.pathloss.pathloss - INFO - Using aperture S1600A1
2026-05-12 21:06:47,367 - stpipe.step - INFO - Step pathloss done
2026-05-12 21:06:47,672 - stpipe.step - INFO - Step barshadow running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:47,673 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:47,964 - stpipe.step - INFO - Step photom running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_rate.fits>,).
2026-05-12 21:06:47,993 - jwst.photom.photom_step - INFO - Using photom reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits
2026-05-12 21:06:47,994 - jwst.photom.photom_step - INFO - Using area reference file: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits
2026-05-12 21:06:47,995 - jwst.photom.photom - INFO - Using instrument: NIRSPEC
2026-05-12 21:06:47,996 - jwst.photom.photom - INFO - detector: NRS1
2026-05-12 21:06:47,996 - jwst.photom.photom - INFO - exp_type: NRS_FIXEDSLIT
2026-05-12 21:06:47,997 - jwst.photom.photom - INFO - filter: CLEAR
2026-05-12 21:06:47,997 - jwst.photom.photom - INFO - grating: PRISM
2026-05-12 21:06:48,045 - jwst.photom.photom - INFO - Working on slit S200A1
2026-05-12 21:06:48,047 - jwst.photom.photom - INFO - PHOTMJSR value: 2.07763e+12
2026-05-12 21:06:48,074 - jwst.photom.photom - INFO - Working on slit S200A2
2026-05-12 21:06:48,075 - jwst.photom.photom - INFO - PHOTMJSR value: 2.06609e+12
2026-05-12 21:06:48,102 - jwst.photom.photom - INFO - Working on slit S400A1
2026-05-12 21:06:48,103 - jwst.photom.photom - INFO - PHOTMJSR value: 1.01656e+12
2026-05-12 21:06:48,131 - jwst.photom.photom - INFO - Working on slit S1600A1
2026-05-12 21:06:48,132 - jwst.photom.photom - INFO - PHOTMJSR value: 2.51146e+11
2026-05-12 21:06:48,163 - stpipe.step - INFO - Step photom done
2026-05-12 21:06:48,833 - stpipe.step - INFO - Step pixel_replace running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00008_nrs1_cal.fits>,).
2026-05-12 21:06:48,834 - stpipe.step - INFO - Step skipped.
2026-05-12 21:06:49,166 - stpipe.step - INFO - Step resample_spec running with args (<MultiSlitModel from data/stage2/jw01216005001_03103_00008_nrs1_cal.fits>,).
2026-05-12 21:06:49,429 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure data/stage2/jw01216005001_03103_00008_nrs1_cal.fits
2026-05-12 21:06:50,340 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:50,349 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:06:50,351 - stcal.resample.resample - INFO - Output pixel scale: 0.10549438539330473 arcsec.
2026-05-12 21:06:50,351 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:50,352 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:50,352 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:50,354 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:50,354 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:50,388 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:50,391 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:50,394 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:50,397 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (36, 433)
2026-05-12 21:06:50,515 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108713622 -27.866249616 53.108939822 -27.866249616 53.108939822 -27.865243659 53.108713622 -27.865243659
2026-05-12 21:06:50,699 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:50,707 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:06:50,709 - stcal.resample.resample - INFO - Output pixel scale: 0.1054112332277611 arcsec.
2026-05-12 21:06:50,710 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:50,710 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:50,711 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:50,711 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:50,713 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:50,746 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:50,749 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:50,752 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:50,755 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (36, 435)
2026-05-12 21:06:50,874 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102440917 -27.866325446 53.102665456 -27.866325446 53.102665456 -27.865320023 53.102440917 -27.865320023
2026-05-12 21:06:51,411 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:51,419 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:06:51,421 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862191188625 arcsec.
2026-05-12 21:06:51,422 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:51,422 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:51,423 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:51,423 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:51,425 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:51,459 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:51,462 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:51,465 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:51,468 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (41, 434)
2026-05-12 21:06:51,583 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106105385 -27.864584526 53.106362908 -27.864584526 53.106362908 -27.863436793 53.106105385 -27.863436793
2026-05-12 21:06:51,750 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:06:51,758 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:06:51,760 - stcal.resample.resample - INFO - Output pixel scale: 0.10522737991740114 arcsec.
2026-05-12 21:06:51,760 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:06:51,761 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:06:51,762 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:06:51,762 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:06:51,763 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:51,790 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:06:51,792 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:51,793 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:51,795 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (18, 431)
2026-05-12 21:06:51,908 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106763798 -27.863214305 53.106873271 -27.863214305 53.106873271 -27.862726914 53.106763798 -27.862726914
2026-05-12 21:06:52,183 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00008_nrs1_s2d.fits
2026-05-12 21:06:52,184 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:06:52,561 - stpipe.step - INFO - Step extract_1d running with args (<MultiSlitModel from jw01216005001_03103_00008_nrs1_s2d.fits>,).
2026-05-12 21:06:52,577 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:06:52,592 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:06:52,650 - jwst.extract_1d.extract - INFO - Working on slit S200A1
2026-05-12 21:06:52,654 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:52,657 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 216, wavelength 3.44
2026-05-12 21:06:52,658 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:52,659 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:52,660 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:52,712 - jwst.extract_1d.extract - INFO - Working on slit S200A2
2026-05-12 21:06:52,716 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:52,719 - jwst.extract_1d.extract - INFO - Computed source location is 18.00, at pixel 217, wavelength 3.44
2026-05-12 21:06:52,720 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:06:52,721 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -11.00 pixels
2026-05-12 21:06:52,722 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 15.50 -> 20.50 (inclusive)
2026-05-12 21:06:52,774 - jwst.extract_1d.extract - INFO - Working on slit S400A1
2026-05-12 21:06:52,778 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:52,781 - jwst.extract_1d.extract - INFO - Computed source location is 20.39, at pixel 216, wavelength 3.44
2026-05-12 21:06:52,783 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:06:52,783 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -13.11 pixels
2026-05-12 21:06:52,785 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 17.89 -> 22.89 (inclusive)
2026-05-12 21:06:52,836 - jwst.extract_1d.extract - INFO - Working on slit S1600A1
2026-05-12 21:06:52,839 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:06:52,842 - jwst.extract_1d.extract - INFO - Computed source location is 8.84, at pixel 215, wavelength 3.44
2026-05-12 21:06:52,843 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:06:52,844 - jwst.extract_1d.extract - INFO - Nominal location is 15.50, so offset is -6.66 pixels
2026-05-12 21:06:52,845 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 6.84 -> 10.84 (inclusive)
2026-05-12 21:06:53,005 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00008_nrs1_x1d.fits
2026-05-12 21:06:53,006 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:06:53,007 - jwst.pipeline.calwebb_spec2 - INFO - Finished processing product data/jw01216005001_03103_00008_nrs1
2026-05-12 21:06:53,009 - jwst.pipeline.calwebb_spec2 - INFO - Ending calwebb_spec2
2026-05-12 21:06:53,009 - jwst.stpipe.core - INFO - Results used CRDS context: jwst_1535.pmap
2026-05-12 21:06:53,488 - stpipe.step - INFO - Saved model in data/stage2/jw01216005001_03103_00008_nrs1_cal.fits
2026-05-12 21:06:53,489 - stpipe.step - INFO - Step Spec2Pipeline done
2026-05-12 21:06:53,489 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
Stage 2 has been completed!
# List the Stage 2 products.
# -----------------------------Science files-----------------------------
sci_cal = sorted(glob.glob(stage2_dir + '*_cal.fits'))
sci_s2d = sorted(glob.glob(stage2_dir + '*_s2d.fits'))
sci_x1d = sorted(glob.glob(stage2_dir + '*_x1d.fits'))
print(f"SCIENCE | Stage 2 CAL Products:\n{'-' * 20}\n" + "\n".join(sci_cal))
print(f"SCIENCE | Stage 2 S2D Products:\n{'-' * 20}\n" + "\n".join(sci_s2d))
print(f"SCIENCE | Stage 2 X1D Products:\n{'-' * 20}\n" + "\n".join(sci_x1d))
SCIENCE | Stage 2 CAL Products:
--------------------
data/stage2/jw01216005001_03103_00001_nrs1_cal.fits
data/stage2/jw01216005001_03103_00002_nrs1_cal.fits
data/stage2/jw01216005001_03103_00003_nrs1_cal.fits
data/stage2/jw01216005001_03103_00004_nrs1_cal.fits
data/stage2/jw01216005001_03103_00005_nrs1_cal.fits
data/stage2/jw01216005001_03103_00006_nrs1_cal.fits
data/stage2/jw01216005001_03103_00007_nrs1_cal.fits
data/stage2/jw01216005001_03103_00008_nrs1_cal.fits
data/stage2/jw02750002001_07101_00001_nrs1_cal.fits
data/stage2/jw02750002001_07101_00002_nrs1_cal.fits
data/stage2/jw02750002001_07101_00003_nrs1_cal.fits
SCIENCE | Stage 2 S2D Products:
--------------------
data/stage2/jw01216005001_03103_00001_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00002_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00003_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00004_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00005_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00006_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00007_nrs1_s2d.fits
data/stage2/jw01216005001_03103_00008_nrs1_s2d.fits
data/stage2/jw02750002001_07101_00001_nrs1_s2d.fits
data/stage2/jw02750002001_07101_00002_nrs1_s2d.fits
data/stage2/jw02750002001_07101_00003_nrs1_s2d.fits
SCIENCE | Stage 2 X1D Products:
--------------------
data/stage2/jw01216005001_03103_00001_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00002_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00003_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00004_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00005_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00006_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00007_nrs1_x1d.fits
data/stage2/jw01216005001_03103_00008_nrs1_x1d.fits
data/stage2/jw02750002001_07101_00001_nrs1_x1d.fits
data/stage2/jw02750002001_07101_00002_nrs1_x1d.fits
data/stage2/jw02750002001_07101_00003_nrs1_x1d.fits
# Source units can be FLUX or SURF_BRIGHT.
display_spectra(sci_s2d + sci_x1d,
source_id='S400A1', source_unit='SURF_BRIGHT', scale='log',
vmin=0, vmax=3, #y_limits=(-1e-6, 0.3e-5),
title_prefix='REPROCESSED', is_stage3=False)
7. Extract FS Data from MOS/IFU Observations (Stage 3)#
Run Stage 3 and extract the spectra. We create Stage 3 association files here to show what a final stage 3 FS products look like.
# Set up a dictionary to define how the Spec3 pipeline should be configured.
spec3dict = defaultdict(dict)
spec3dict['extract_1d']['use_source_posn'] = True
# Write ASN files and proccess through Stage 3.
writel3asn(sci_cal, dir=stage2_dir)
for spec3_asn in glob.glob(stage2_dir+'*l3asn.json'):
print(f"Applying Stage 3 Corrections & Calibrations to: "f"{os.path.basename(spec3_asn)}")
spec3_result = Spec3Pipeline.call(spec3_asn,
save_results=True,
steps=spec3dict,
output_dir=stage3_dir)
print("Stage 3 has been completed! \n")
Level 3 ASN creation complete!
Applying Stage 3 Corrections & Calibrations to: program02750_002_clear_prism_l3asn.json
2026-05-12 21:07:01,736 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-outlierdetectionstep_0006.asdf 1.6 K bytes (1 / 1 files) (0 / 1.6 K bytes)
2026-05-12 21:07:01,797 - stpipe.step - INFO - PARS-OUTLIERDETECTIONSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-outlierdetectionstep_0006.asdf
2026-05-12 21:07:01,848 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:07:01,942 - stpipe.step - INFO - Spec3Pipeline instance created.
2026-05-12 21:07:01,944 - stpipe.step - INFO - AssignMTWcsStep instance created.
2026-05-12 21:07:01,945 - stpipe.step - INFO - MasterBackgroundStep instance created.
2026-05-12 21:07:01,946 - stpipe.step - INFO - OutlierDetectionStep instance created.
2026-05-12 21:07:01,947 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:07:01,948 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:07:01,949 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:07:01,950 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:07:01,952 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:07:01,953 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:07:01,954 - stpipe.step - INFO - Combine1dStep instance created.
2026-05-12 21:07:01,955 - stpipe.step - INFO - SpectralLeakStep instance created.
2026-05-12 21:07:02,218 - stpipe.step - INFO - Step Spec3Pipeline running with args ('data/stage2/program02750_002_clear_prism_l3asn.json',).
2026-05-12 21:07:02,231 - stpipe.step - INFO - Step Spec3Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage3/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
steps:
assign_mtwcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: assign_mtwcs
search_output_file: True
input_dir: ''
master_background:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
median_kernel: 1
user_background: None
save_background: False
force_subtract: False
outlier_detection:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: False
input_dir: ''
weight_type: ivm
pixfrac: 1.0
kernel: square
fillval: NaN
maskpt: 0.0
snr: 5.0 4.0
scale: 3.0 2.0
backg: 0.0
kernel_size: 7 7
threshold_percent: 99.8
rolling_window_width: 25
ifu_second_check: False
save_intermediate_results: False
resample_data: True
good_bits: ~DO_NOT_USE
in_memory: True
pixmap_stepsize: 1.0
pixmap_order: 1
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
combine_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
exptime_key: exposure_time
sigma_clip: None
spectral_leak:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
2026-05-12 21:07:02,835 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'program02750_002_clear_prism_l3asn.json' reftypes = ['apcorr', 'area', 'cubepar', 'extract1d', 'mrsptcorr', 'pastasoss', 'photom', 'psf', 'speckernel', 'specprofile']
2026-05-12 21:07:02,854 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0004.fits'.
2026-05-12 21:07:02,855 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0033.fits'.
2026-05-12 21:07:02,855 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:07:02,856 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0009.json'.
2026-05-12 21:07:02,857 - stpipe.pipeline - INFO - Prefetch for MRSPTCORR reference file is 'N/A'.
2026-05-12 21:07:02,857 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:07:02,857 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0015.fits'.
2026-05-12 21:07:02,858 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:07:02,858 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:07:02,859 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:07:02,859 - jwst.pipeline.calwebb_spec3 - INFO - Starting calwebb_spec3 ...
2026-05-12 21:07:06,137 - jwst.pipeline.calwebb_spec3 - INFO - Convert from exposure-based to source-based data.
2026-05-12 21:07:06,138 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw02750002001_07101_00001_nrs1_cal.fits
2026-05-12 21:07:07,360 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw02750002001_07101_00002_nrs1_cal.fits
2026-05-12 21:07:07,726 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw02750002001_07101_00003_nrs1_cal.fits
2026-05-12 21:07:09,679 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106280_cal.fits
2026-05-12 21:07:10,008 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bcb5b990>,).
2026-05-12 21:07:10,009 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:10,009 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:10,259 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:10,267 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.1055 arcsec.
2026-05-12 21:07:10,269 - stcal.resample.resample - INFO - Output pixel scale: 0.1054982528637053 arcsec.
2026-05-12 21:07:10,270 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:10,271 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:10,271 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:10,272 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:10,273 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:10,303 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:10,402 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:10,433 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:10,530 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:10,560 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:10,714 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,744 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,751 - jwst.outlier_detection.utils - INFO - 591 pixels marked as outliers
2026-05-12 21:07:10,780 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,809 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,816 - jwst.outlier_detection.utils - INFO - 325 pixels marked as outliers
2026-05-12 21:07:10,846 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,875 - stcal.outlier_detection.utils - INFO - Blotting (39, 434) <-- (46, 434)
2026-05-12 21:07:10,883 - jwst.outlier_detection.utils - INFO - 377 pixels marked as outliers
2026-05-12 21:07:11,817 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106280_crf.fits
2026-05-12 21:07:11,819 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:07:12,182 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bcb5b990>,).
2026-05-12 21:07:12,183 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:12,532 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bcb5b990>,).
2026-05-12 21:07:12,533 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:12,883 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bcb5b990>,).
2026-05-12 21:07:13,136 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:13,145 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.1055 arcsec.
2026-05-12 21:07:13,147 - stcal.resample.resample - INFO - Output pixel scale: 0.10549825281028155 arcsec.
2026-05-12 21:07:13,148 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:13,148 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:13,149 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:13,149 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:07:13,151 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:13,182 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:13,185 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,188 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,191 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,280 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:13,283 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,286 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,289 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,323 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:13,326 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,329 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,332 - stcal.resample.resample - INFO - Drizzling (39, 434) --> (46, 434)
2026-05-12 21:07:13,590 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.934648221 52.920286497 214.934932281 52.920286497 214.934932281 52.921594057 214.934648221 52.921594057
2026-05-12 21:07:13,796 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106280_s2d.fits
2026-05-12 21:07:13,797 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:07:14,163 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(46, 434) from program02750_002_clear_prism_s000106280_s2d.fits>,).
2026-05-12 21:07:14,210 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:07:14,216 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:07:14,265 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:07:14,268 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:07:14,272 - jwst.extract_1d.extract - INFO - Computed source location is 22.99, at pixel 216, wavelength 3.44
2026-05-12 21:07:14,273 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:07:14,274 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -6.01 pixels
2026-05-12 21:07:14,275 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 20.49 -> 25.49 (inclusive)
2026-05-12 21:07:14,395 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106280_x1d.fits
2026-05-12 21:07:14,396 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:07:15,195 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106281_cal.fits
2026-05-12 21:07:15,542 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97b7cfc050>,).
2026-05-12 21:07:15,543 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:15,543 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:15,800 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:15,808 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:07:15,810 - stcal.resample.resample - INFO - Output pixel scale: 0.10541496714675153 arcsec.
2026-05-12 21:07:15,811 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:15,812 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:15,812 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:15,813 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:15,814 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:15,845 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:15,950 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:15,982 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:16,081 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:16,113 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:16,266 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,297 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,304 - jwst.outlier_detection.utils - INFO - 545 pixels marked as outliers
2026-05-12 21:07:16,334 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,364 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,371 - jwst.outlier_detection.utils - INFO - 526 pixels marked as outliers
2026-05-12 21:07:16,401 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,430 - stcal.outlier_detection.utils - INFO - Blotting (40, 436) <-- (46, 436)
2026-05-12 21:07:16,438 - jwst.outlier_detection.utils - INFO - 317 pixels marked as outliers
2026-05-12 21:07:17,379 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106281_crf.fits
2026-05-12 21:07:17,381 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:07:17,750 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97b7cfc050>,).
2026-05-12 21:07:17,751 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:18,106 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97b7cfc050>,).
2026-05-12 21:07:18,107 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:18,453 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97b7cfc050>,).
2026-05-12 21:07:18,709 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:18,717 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:07:18,719 - stcal.resample.resample - INFO - Output pixel scale: 0.10541496715810662 arcsec.
2026-05-12 21:07:18,720 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:18,721 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:18,721 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:18,722 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:07:18,723 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:18,754 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:18,757 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,760 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,762 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,855 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:18,858 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,861 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,864 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,898 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:18,902 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,904 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:18,907 - stcal.resample.resample - INFO - Drizzling (40, 436) --> (46, 436)
2026-05-12 21:07:19,158 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.943837221 52.919996909 214.944118063 52.919996909 214.944118063 52.921303671 214.943837221 52.921303671
2026-05-12 21:07:19,367 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106281_s2d.fits
2026-05-12 21:07:19,368 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:07:19,738 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(46, 436) from program02750_002_clear_prism_s000106281_s2d.fits>,).
2026-05-12 21:07:19,774 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:07:19,780 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:07:19,831 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:07:19,834 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:07:19,838 - jwst.extract_1d.extract - INFO - Computed source location is 22.99, at pixel 218, wavelength 3.44
2026-05-12 21:07:19,839 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:07:19,840 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -6.01 pixels
2026-05-12 21:07:19,841 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 20.49 -> 25.49 (inclusive)
2026-05-12 21:07:19,963 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106281_x1d.fits
2026-05-12 21:07:19,964 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:07:20,759 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106282_cal.fits
2026-05-12 21:07:21,105 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba363110>,).
2026-05-12 21:07:21,106 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:21,106 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:21,373 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:21,381 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:07:21,384 - stcal.resample.resample - INFO - Output pixel scale: 0.10531245797027673 arcsec.
2026-05-12 21:07:21,384 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:21,385 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:21,385 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:21,386 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:21,387 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:21,422 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:21,525 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:21,558 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:21,659 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:21,691 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:21,845 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:21,877 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:21,884 - jwst.outlier_detection.utils - INFO - 649 pixels marked as outliers
2026-05-12 21:07:21,915 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:21,946 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:21,954 - jwst.outlier_detection.utils - INFO - 499 pixels marked as outliers
2026-05-12 21:07:21,986 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:22,017 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (51, 434)
2026-05-12 21:07:22,026 - jwst.outlier_detection.utils - INFO - 413 pixels marked as outliers
2026-05-12 21:07:22,971 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106282_crf.fits
2026-05-12 21:07:22,972 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:07:23,340 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba363110>,).
2026-05-12 21:07:23,341 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:23,696 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba363110>,).
2026-05-12 21:07:23,697 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:24,051 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba363110>,).
2026-05-12 21:07:24,311 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:24,319 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:07:24,322 - stcal.resample.resample - INFO - Output pixel scale: 0.10531245792823053 arcsec.
2026-05-12 21:07:24,322 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:24,323 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:24,324 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:24,324 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:07:24,325 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:24,357 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:24,360 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,364 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,367 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,462 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:24,466 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,469 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,472 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,510 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:24,513 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,516 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,519 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (51, 434)
2026-05-12 21:07:24,775 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.938236643 52.918331488 214.938550642 52.918331488 214.938550642 52.919781857 214.938236643 52.919781857
2026-05-12 21:07:24,992 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106282_s2d.fits
2026-05-12 21:07:24,993 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:07:25,366 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(51, 434) from program02750_002_clear_prism_s000106282_s2d.fits>,).
2026-05-12 21:07:25,401 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:07:25,408 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:07:25,462 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:07:25,466 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:07:25,469 - jwst.extract_1d.extract - INFO - Computed source location is 25.39, at pixel 216, wavelength 3.44
2026-05-12 21:07:25,470 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:07:25,471 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -8.11 pixels
2026-05-12 21:07:25,473 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 22.89 -> 27.89 (inclusive)
2026-05-12 21:07:25,601 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106282_x1d.fits
2026-05-12 21:07:25,602 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:07:26,411 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106283_cal.fits
2026-05-12 21:07:26,764 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c1fa6e10>,).
2026-05-12 21:07:26,765 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:26,766 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:26,997 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:27,006 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:07:27,008 - stcal.resample.resample - INFO - Output pixel scale: 0.10523124166461754 arcsec.
2026-05-12 21:07:27,009 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:27,009 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:27,010 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:27,011 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:27,012 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:27,037 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:27,136 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:27,162 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:27,263 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:27,289 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:27,423 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,448 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,455 - jwst.outlier_detection.utils - INFO - 124 pixels marked as outliers
2026-05-12 21:07:27,480 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,505 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,511 - jwst.outlier_detection.utils - INFO - 73 pixels marked as outliers
2026-05-12 21:07:27,536 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,560 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (28, 431)
2026-05-12 21:07:27,568 - jwst.outlier_detection.utils - INFO - 60 pixels marked as outliers
2026-05-12 21:07:28,527 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106283_crf.fits
2026-05-12 21:07:28,529 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:07:28,897 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c1fa6e10>,).
2026-05-12 21:07:28,898 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:29,243 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c1fa6e10>,).
2026-05-12 21:07:29,244 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:29,641 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c1fa6e10>,).
2026-05-12 21:07:29,873 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:29,881 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:07:29,884 - stcal.resample.resample - INFO - Output pixel scale: 0.10523124164191079 arcsec.
2026-05-12 21:07:29,884 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:29,885 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:29,886 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:29,886 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:07:29,887 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:29,914 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:29,916 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:29,917 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:29,919 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,008 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:30,010 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,012 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,014 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,043 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:30,044 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,046 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,048 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (28, 431)
2026-05-12 21:07:30,299 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 214.937339987 52.917661630 214.937509683 52.917661630 214.937509683 52.918444204 214.937339987 52.918444204
2026-05-12 21:07:30,512 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106283_s2d.fits
2026-05-12 21:07:30,513 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:07:30,884 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(28, 431) from program02750_002_clear_prism_s000106283_s2d.fits>,).
2026-05-12 21:07:30,921 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:07:30,928 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:07:30,983 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:07:30,987 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:07:30,990 - jwst.extract_1d.extract - INFO - Computed source location is 13.84, at pixel 215, wavelength 3.43
2026-05-12 21:07:30,991 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:07:30,992 - jwst.extract_1d.extract - INFO - Nominal location is 16.00, so offset is -2.16 pixels
2026-05-12 21:07:30,993 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 11.84 -> 15.84 (inclusive)
2026-05-12 21:07:31,121 - stpipe.step - INFO - Saved model in data/stage3/program02750_002_clear_prism_s000106283_x1d.fits
2026-05-12 21:07:31,121 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:07:31,124 - jwst.pipeline.calwebb_spec3 - INFO - Ending calwebb_spec3
2026-05-12 21:07:31,131 - stpipe.step - INFO - Step Spec3Pipeline done
2026-05-12 21:07:31,131 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
Applying Stage 3 Corrections & Calibrations to: program01216_005_clear_prism_l3asn.json
2026-05-12 21:07:31,412 - CRDS - INFO - Fetching /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-outlierdetectionstep_0007.asdf 1.6 K bytes (1 / 1 files) (0 / 1.6 K bytes)
2026-05-12 21:07:31,484 - stpipe.step - INFO - PARS-OUTLIERDETECTIONSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-outlierdetectionstep_0007.asdf
2026-05-12 21:07:31,519 - stpipe.step - INFO - PARS-RESAMPLESPECSTEP parameters found: /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_pars-resamplespecstep_0001.asdf
2026-05-12 21:07:31,582 - stpipe.step - INFO - Spec3Pipeline instance created.
2026-05-12 21:07:31,583 - stpipe.step - INFO - AssignMTWcsStep instance created.
2026-05-12 21:07:31,584 - stpipe.step - INFO - MasterBackgroundStep instance created.
2026-05-12 21:07:31,585 - stpipe.step - INFO - OutlierDetectionStep instance created.
2026-05-12 21:07:31,586 - stpipe.step - INFO - AdaptiveTraceModelStep instance created.
2026-05-12 21:07:31,587 - stpipe.step - INFO - PixelReplaceStep instance created.
2026-05-12 21:07:31,588 - stpipe.step - INFO - ResampleSpecStep instance created.
2026-05-12 21:07:31,589 - stpipe.step - INFO - CubeBuildStep instance created.
2026-05-12 21:07:31,591 - stpipe.step - INFO - Extract1dStep instance created.
2026-05-12 21:07:31,592 - stpipe.step - INFO - PhotomStep instance created.
2026-05-12 21:07:31,593 - stpipe.step - INFO - Combine1dStep instance created.
2026-05-12 21:07:31,593 - stpipe.step - INFO - SpectralLeakStep instance created.
2026-05-12 21:07:32,041 - stpipe.step - INFO - Step Spec3Pipeline running with args ('data/stage2/program01216_005_clear_prism_l3asn.json',).
2026-05-12 21:07:32,054 - stpipe.step - INFO - Step Spec3Pipeline parameters are:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: data/stage3/
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: True
skip: False
suffix: None
search_output_file: True
input_dir: ''
steps:
assign_mtwcs:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: assign_mtwcs
search_output_file: True
input_dir: ''
master_background:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
median_kernel: 1
user_background: None
save_background: False
force_subtract: False
outlier_detection:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: False
input_dir: ''
weight_type: ivm
pixfrac: 1.0
kernel: square
fillval: NaN
maskpt: 0.0
snr: 5.0 4.0
scale: 3.0 2.0
backg: 0.0
kernel_size: 7 7
threshold_percent: 99.8
rolling_window_width: 25
ifu_second_check: False
save_intermediate_results: False
resample_data: True
good_bits: ~DO_NOT_USE
in_memory: True
pixmap_stepsize: 1.0
pixmap_order: 1
adaptive_trace_model:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
fit_threshold: 10.0
oversample: 1.0
slope_limit: 0.1
psf_optimal: False
save_intermediate_results: False
pixel_replace:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: True
suffix: None
search_output_file: True
input_dir: ''
algorithm: fit_profile
n_adjacent_cols: 3
resample_spec:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
pixfrac: 1.0
kernel: square
fillval: NaN
weight_type: exptime
output_shape: None
pixel_scale_ratio: 1.0
pixel_scale: None
output_wcs: ''
single: False
blendheaders: True
in_memory: True
propagate_dq: False
cube_build:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: True
output_use_index: True
save_results: False
skip: False
suffix: s3d
search_output_file: False
input_dir: ''
pipeline: 3
channel: all
band: all
grating: all
filter: all
output_type: None
linear_wave: True
scalexy: 0.0
scalew: 0.0
weighting: drizzle
coord_system: skyalign
ra_center: None
dec_center: None
cube_pa: None
nspax_x: None
nspax_y: None
rois: 0.0
roiw: 0.0
weight_power: 2.0
wavemin: None
wavemax: None
single: False
skip_dqflagging: False
offset_file: None
debug_spaxel: -1 -1 -1
extract_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
subtract_background: None
apply_apcorr: True
extraction_type: box
use_source_posn: True
position_offset: 0.0
model_nod_pair: True
optimize_psf_location: True
smoothing_length: None
bkg_fit: None
bkg_order: None
log_increment: 50
save_profile: False
save_scene_model: False
save_residual_image: False
center_xy: None
ifu_autocen: False
bkg_sigma_clip: 3.0
ifu_rfcorr: True
ifu_set_srctype: None
ifu_rscale: None
ifu_covar_scale: 1.0
soss_atoca: True
soss_threshold: 0.01
soss_n_os: 2
soss_wave_grid_in: None
soss_wave_grid_out: None
soss_estimate: None
soss_rtol: 0.0001
soss_max_grid_size: 20000
soss_tikfac: None
soss_width: 40.0
soss_bad_pix: masking
soss_modelname: None
soss_order_3: True
photom:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
inverse: False
source_type: None
apply_time_correction: True
combine_1d:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
exptime_key: exposure_time
sigma_clip: None
spectral_leak:
pre_hooks: []
post_hooks: []
output_file: None
output_dir: None
output_ext: .fits
output_use_model: False
output_use_index: True
save_results: False
skip: False
suffix: None
search_output_file: True
input_dir: ''
2026-05-12 21:07:32,617 - stpipe.pipeline - INFO - Prefetching reference files for dataset: 'program01216_005_clear_prism_l3asn.json' reftypes = ['apcorr', 'area', 'cubepar', 'extract1d', 'mrsptcorr', 'pastasoss', 'photom', 'psf', 'speckernel', 'specprofile']
2026-05-12 21:07:32,628 - stpipe.pipeline - INFO - Prefetch for APCORR reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits'.
2026-05-12 21:07:32,629 - stpipe.pipeline - INFO - Prefetch for AREA reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_area_0058.fits'.
2026-05-12 21:07:32,630 - stpipe.pipeline - INFO - Prefetch for CUBEPAR reference file is 'N/A'.
2026-05-12 21:07:32,630 - stpipe.pipeline - INFO - Prefetch for EXTRACT1D reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json'.
2026-05-12 21:07:32,631 - stpipe.pipeline - INFO - Prefetch for MRSPTCORR reference file is 'N/A'.
2026-05-12 21:07:32,632 - stpipe.pipeline - INFO - Prefetch for PASTASOSS reference file is 'N/A'.
2026-05-12 21:07:32,632 - stpipe.pipeline - INFO - Prefetch for PHOTOM reference file is '/home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_photom_0014.fits'.
2026-05-12 21:07:32,633 - stpipe.pipeline - INFO - Prefetch for PSF reference file is 'N/A'.
2026-05-12 21:07:32,633 - stpipe.pipeline - INFO - Prefetch for SPECKERNEL reference file is 'N/A'.
2026-05-12 21:07:32,634 - stpipe.pipeline - INFO - Prefetch for SPECPROFILE reference file is 'N/A'.
2026-05-12 21:07:32,634 - jwst.pipeline.calwebb_spec3 - INFO - Starting calwebb_spec3 ...
2026-05-12 21:07:39,787 - jwst.pipeline.calwebb_spec3 - INFO - Convert from exposure-based to source-based data.
2026-05-12 21:07:39,787 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00001_nrs1_cal.fits
2026-05-12 21:07:40,459 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00002_nrs1_cal.fits
2026-05-12 21:07:41,216 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00003_nrs1_cal.fits
2026-05-12 21:07:41,501 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00004_nrs1_cal.fits
2026-05-12 21:07:41,789 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00005_nrs1_cal.fits
2026-05-12 21:07:42,077 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00006_nrs1_cal.fits
2026-05-12 21:07:42,367 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00007_nrs1_cal.fits
2026-05-12 21:07:42,657 - jwst.exp_to_source.exp_to_source - INFO - Reorganizing data from exposure jw01216005001_03103_00008_nrs1_cal.fits
2026-05-12 21:07:45,513 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a1_s000000001_cal.fits
2026-05-12 21:07:45,978 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba068050>,).
2026-05-12 21:07:45,980 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:45,980 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:46,475 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:46,483 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:07:46,489 - stcal.resample.resample - INFO - Output pixel scale: 0.10549439040775282 arcsec.
2026-05-12 21:07:46,490 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:46,490 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:46,491 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:46,492 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:46,492 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:46,525 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:46,620 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:46,651 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:46,745 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:46,776 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:46,869 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:46,899 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:46,993 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:47,024 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:47,117 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:47,147 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:47,239 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:47,270 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:47,364 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:47,395 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:47,543 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,573 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,580 - jwst.outlier_detection.utils - INFO - 618 pixels marked as outliers
2026-05-12 21:07:47,610 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,640 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,648 - jwst.outlier_detection.utils - INFO - 472 pixels marked as outliers
2026-05-12 21:07:47,678 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,712 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,722 - jwst.outlier_detection.utils - INFO - 420 pixels marked as outliers
2026-05-12 21:07:47,751 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,783 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,790 - jwst.outlier_detection.utils - INFO - 367 pixels marked as outliers
2026-05-12 21:07:47,820 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,851 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,858 - jwst.outlier_detection.utils - INFO - 601 pixels marked as outliers
2026-05-12 21:07:47,887 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,917 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,924 - jwst.outlier_detection.utils - INFO - 561 pixels marked as outliers
2026-05-12 21:07:47,955 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,984 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:47,992 - jwst.outlier_detection.utils - INFO - 472 pixels marked as outliers
2026-05-12 21:07:48,021 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:48,051 - stcal.outlier_detection.utils - INFO - Blotting (39, 433) <-- (42, 433)
2026-05-12 21:07:48,058 - jwst.outlier_detection.utils - INFO - 636 pixels marked as outliers
2026-05-12 21:07:50,103 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a1_s000000001_crf.fits
2026-05-12 21:07:50,105 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:07:50,584 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba068050>,).
2026-05-12 21:07:50,585 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:51,097 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba068050>,).
2026-05-12 21:07:51,098 - stpipe.step - INFO - Step skipped.
2026-05-12 21:07:51,613 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97ba068050>,).
2026-05-12 21:07:52,099 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:52,107 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10549 arcsec.
2026-05-12 21:07:52,113 - stcal.resample.resample - INFO - Output pixel scale: 0.10549439049277028 arcsec.
2026-05-12 21:07:52,114 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:52,114 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:52,115 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:52,116 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:07:52,117 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,148 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,151 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,154 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,157 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,240 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,243 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,246 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,249 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,285 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,288 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,291 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,293 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,329 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,333 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,335 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,338 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,374 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,377 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,380 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,383 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,418 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,421 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,424 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,426 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,462 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,466 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,468 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,471 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,506 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:52,509 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,512 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,514 - stcal.resample.resample - INFO - Drizzling (39, 433) --> (42, 433)
2026-05-12 21:07:52,769 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.108761150 -27.866338683 53.109026126 -27.866338683 53.109026126 -27.865160277 53.108761150 -27.865160277
2026-05-12 21:07:52,973 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a1_s000000001_s2d.fits
2026-05-12 21:07:52,974 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:07:53,487 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(42, 433) from program01216_005_clear_prism_s200a1_s000000001_s2d.fits>,).
2026-05-12 21:07:53,493 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:07:53,496 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:07:53,539 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:07:53,542 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:07:53,546 - jwst.extract_1d.extract - INFO - Computed source location is 23.27, at pixel 216, wavelength 3.44
2026-05-12 21:07:53,547 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:07:53,548 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -5.73 pixels
2026-05-12 21:07:53,549 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 20.77 -> 25.77 (inclusive)
2026-05-12 21:07:53,660 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a1_s000000001_x1d.fits
2026-05-12 21:07:53,661 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:07:55,082 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a2_s000000002_cal.fits
2026-05-12 21:07:55,569 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c08d3890>,).
2026-05-12 21:07:55,570 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:07:55,571 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:07:56,063 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:07:56,071 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:07:56,077 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123826297938 arcsec.
2026-05-12 21:07:56,078 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:07:56,079 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:07:56,079 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:07:56,080 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:07:56,080 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,112 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,206 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,237 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,331 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,362 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,456 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,487 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,580 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,612 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,706 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,737 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,832 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,864 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:56,959 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:07:56,990 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:07:57,136 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,166 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,173 - jwst.outlier_detection.utils - INFO - 542 pixels marked as outliers
2026-05-12 21:07:57,203 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,234 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,241 - jwst.outlier_detection.utils - INFO - 519 pixels marked as outliers
2026-05-12 21:07:57,272 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,302 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,311 - jwst.outlier_detection.utils - INFO - 387 pixels marked as outliers
2026-05-12 21:07:57,341 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,373 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,380 - jwst.outlier_detection.utils - INFO - 478 pixels marked as outliers
2026-05-12 21:07:57,411 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,442 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,449 - jwst.outlier_detection.utils - INFO - 563 pixels marked as outliers
2026-05-12 21:07:57,478 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,508 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,516 - jwst.outlier_detection.utils - INFO - 563 pixels marked as outliers
2026-05-12 21:07:57,546 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,576 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,584 - jwst.outlier_detection.utils - INFO - 573 pixels marked as outliers
2026-05-12 21:07:57,614 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,645 - stcal.outlier_detection.utils - INFO - Blotting (40, 435) <-- (42, 435)
2026-05-12 21:07:57,653 - jwst.outlier_detection.utils - INFO - 555 pixels marked as outliers
2026-05-12 21:07:59,756 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a2_s000000002_crf.fits
2026-05-12 21:07:59,757 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:08:00,230 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c08d3890>,).
2026-05-12 21:08:00,231 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:00,725 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c08d3890>,).
2026-05-12 21:08:00,726 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:01,220 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97c08d3890>,).
2026-05-12 21:08:01,709 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:08:01,717 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10541 arcsec.
2026-05-12 21:08:01,723 - stcal.resample.resample - INFO - Output pixel scale: 0.10541123821613972 arcsec.
2026-05-12 21:08:01,723 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:08:01,724 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:08:01,725 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:08:01,725 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:08:01,726 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,758 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,761 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,764 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,766 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,852 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,855 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,858 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,860 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,896 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,899 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,901 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,904 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,939 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,942 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,945 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,948 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,985 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:01,988 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,991 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:01,993 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,028 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:02,031 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,034 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,037 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,073 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:02,076 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,079 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,082 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,118 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:02,121 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,124 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,127 - stcal.resample.resample - INFO - Drizzling (40, 435) --> (42, 435)
2026-05-12 21:08:02,378 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.102488586 -27.866414469 53.102751618 -27.866414469 53.102751618 -27.865236687 53.102488586 -27.865236687
2026-05-12 21:08:02,581 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a2_s000000002_s2d.fits
2026-05-12 21:08:02,582 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:08:03,075 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(42, 435) from program01216_005_clear_prism_s200a2_s000000002_s2d.fits>,).
2026-05-12 21:08:03,081 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:08:03,085 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:08:03,130 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:08:03,134 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:08:03,137 - jwst.extract_1d.extract - INFO - Computed source location is 23.28, at pixel 217, wavelength 3.44
2026-05-12 21:08:03,138 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 26.50 -> 31.50 (inclusive)
2026-05-12 21:08:03,139 - jwst.extract_1d.extract - INFO - Nominal location is 29.00, so offset is -5.72 pixels
2026-05-12 21:08:03,140 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 20.78 -> 25.78 (inclusive)
2026-05-12 21:08:03,258 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s200a2_s000000002_x1d.fits
2026-05-12 21:08:03,260 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:08:04,687 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s400a1_s000000003_cal.fits
2026-05-12 21:08:05,163 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bb9ea650>,).
2026-05-12 21:08:05,164 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:08:05,165 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:08:05,676 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:08:05,684 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:08:05,690 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862686260511 arcsec.
2026-05-12 21:08:05,691 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:08:05,692 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:08:05,693 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:08:05,694 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:08:05,695 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:05,728 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:05,822 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:05,855 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:05,949 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:05,981 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,076 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:06,108 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,203 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:06,235 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,330 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:06,362 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,456 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:06,488 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,583 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:06,615 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:06,766 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,798 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,805 - jwst.outlier_detection.utils - INFO - 717 pixels marked as outliers
2026-05-12 21:08:06,837 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,868 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,876 - jwst.outlier_detection.utils - INFO - 587 pixels marked as outliers
2026-05-12 21:08:06,908 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,938 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:06,946 - jwst.outlier_detection.utils - INFO - 445 pixels marked as outliers
2026-05-12 21:08:06,977 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,009 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,016 - jwst.outlier_detection.utils - INFO - 556 pixels marked as outliers
2026-05-12 21:08:07,046 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,078 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,085 - jwst.outlier_detection.utils - INFO - 729 pixels marked as outliers
2026-05-12 21:08:07,115 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,146 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,153 - jwst.outlier_detection.utils - INFO - 692 pixels marked as outliers
2026-05-12 21:08:07,184 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,215 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,223 - jwst.outlier_detection.utils - INFO - 614 pixels marked as outliers
2026-05-12 21:08:07,254 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,286 - stcal.outlier_detection.utils - INFO - Blotting (44, 434) <-- (47, 434)
2026-05-12 21:08:07,293 - jwst.outlier_detection.utils - INFO - 677 pixels marked as outliers
2026-05-12 21:08:09,681 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s400a1_s000000003_crf.fits
2026-05-12 21:08:09,682 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:08:10,157 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bb9ea650>,).
2026-05-12 21:08:10,158 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:10,660 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bb9ea650>,).
2026-05-12 21:08:10,661 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:11,179 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bb9ea650>,).
2026-05-12 21:08:11,688 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:08:11,696 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10531 arcsec.
2026-05-12 21:08:11,702 - stcal.resample.resample - INFO - Output pixel scale: 0.10530862688263623 arcsec.
2026-05-12 21:08:11,703 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:08:11,704 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:08:11,704 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:08:11,705 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:08:11,706 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,738 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,742 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,745 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,748 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,837 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,841 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,844 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,847 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,884 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,887 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,891 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,893 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,930 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,933 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,936 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,939 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,977 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:11,980 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,983 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:11,986 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,022 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:12,026 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,029 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,032 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,070 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:12,073 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,076 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,079 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,116 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:12,119 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,122 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,125 - stcal.resample.resample - INFO - Drizzling (44, 434) --> (47, 434)
2026-05-12 21:08:12,378 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106152986 -27.864673449 53.106449138 -27.864673449 53.106449138 -27.863353555 53.106152986 -27.863353555
2026-05-12 21:08:12,590 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s400a1_s000000003_s2d.fits
2026-05-12 21:08:12,590 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:08:13,102 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(47, 434) from program01216_005_clear_prism_s400a1_s000000003_s2d.fits>,).
2026-05-12 21:08:13,140 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:08:13,145 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:08:13,194 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:08:13,197 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:08:13,201 - jwst.extract_1d.extract - INFO - Computed source location is 25.67, at pixel 216, wavelength 3.44
2026-05-12 21:08:13,202 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 31.00 -> 36.00 (inclusive)
2026-05-12 21:08:13,203 - jwst.extract_1d.extract - INFO - Nominal location is 33.50, so offset is -7.83 pixels
2026-05-12 21:08:13,204 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 23.17 -> 28.17 (inclusive)
2026-05-12 21:08:13,325 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s400a1_s000000003_x1d.fits
2026-05-12 21:08:13,326 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:08:14,783 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s1600a1_s000000004_cal.fits
2026-05-12 21:08:15,251 - stpipe.step - INFO - Step outlier_detection running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bd5caad0>,).
2026-05-12 21:08:15,252 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection mode: spec
2026-05-12 21:08:15,253 - jwst.outlier_detection.outlier_detection_step - INFO - Outlier Detection asn_id: None
2026-05-12 21:08:15,689 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:08:15,697 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:08:15,704 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738482600406 arcsec.
2026-05-12 21:08:15,704 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:08:15,705 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:08:15,706 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:08:15,706 - stcal.resample.resample - INFO - Driz parameter weight_type: ivm
2026-05-12 21:08:15,707 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:15,734 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:15,826 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:15,853 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:15,945 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:15,971 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,065 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:16,092 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,185 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:16,212 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,304 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:16,330 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,422 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:16,449 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,540 - jwst.resample.resample - INFO - 1 exposures to drizzle together
2026-05-12 21:08:16,566 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:16,695 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,721 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,728 - jwst.outlier_detection.utils - INFO - 124 pixels marked as outliers
2026-05-12 21:08:16,752 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,778 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,785 - jwst.outlier_detection.utils - INFO - 87 pixels marked as outliers
2026-05-12 21:08:16,811 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,835 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,843 - jwst.outlier_detection.utils - INFO - 75 pixels marked as outliers
2026-05-12 21:08:16,867 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,893 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,900 - jwst.outlier_detection.utils - INFO - 90 pixels marked as outliers
2026-05-12 21:08:16,924 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,949 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:16,956 - jwst.outlier_detection.utils - INFO - 115 pixels marked as outliers
2026-05-12 21:08:16,980 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,005 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,012 - jwst.outlier_detection.utils - INFO - 128 pixels marked as outliers
2026-05-12 21:08:17,038 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,061 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,069 - jwst.outlier_detection.utils - INFO - 108 pixels marked as outliers
2026-05-12 21:08:17,093 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,118 - stcal.outlier_detection.utils - INFO - Blotting (21, 431) <-- (24, 431)
2026-05-12 21:08:17,125 - jwst.outlier_detection.utils - INFO - 122 pixels marked as outliers
2026-05-12 21:08:19,282 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s1600a1_s000000004_crf.fits
2026-05-12 21:08:19,284 - stpipe.step - INFO - Step outlier_detection done
2026-05-12 21:08:19,756 - stpipe.step - INFO - Step adaptive_trace_model running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bd5caad0>,).
2026-05-12 21:08:19,757 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:20,277 - stpipe.step - INFO - Step pixel_replace running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bd5caad0>,).
2026-05-12 21:08:20,278 - stpipe.step - INFO - Step skipped.
2026-05-12 21:08:20,813 - stpipe.step - INFO - Step resample_spec running with args (<jwst.datamodels.source_container.SourceModelContainer object at 0x7f97bd5caad0>,).
2026-05-12 21:08:21,240 - jwst.resample.resample_spec - INFO - Specified output pixel scale ratio: 1.0.
2026-05-12 21:08:21,248 - jwst.resample.resample_spec - INFO - Computed output pixel scale: 0.10523 arcsec.
2026-05-12 21:08:21,253 - stcal.resample.resample - INFO - Output pixel scale: 0.10522738487731409 arcsec.
2026-05-12 21:08:21,254 - stcal.resample.resample - INFO - Driz parameter kernel: square
2026-05-12 21:08:21,255 - stcal.resample.resample - INFO - Driz parameter pixfrac: 1.0
2026-05-12 21:08:21,255 - stcal.resample.resample - INFO - Driz parameter fillval: NaN
2026-05-12 21:08:21,256 - stcal.resample.resample - INFO - Driz parameter weight_type: exptime
2026-05-12 21:08:21,257 - jwst.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,283 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,285 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,287 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,289 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,372 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,374 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,376 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,377 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,406 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,408 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,410 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,411 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,439 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,441 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,443 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,444 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,473 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,475 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,477 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,478 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,506 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,508 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,510 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,512 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,541 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,543 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,545 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,546 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,574 - stcal.resample.resample - INFO - Resampling science and variance data
2026-05-12 21:08:21,576 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,578 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,579 - stcal.resample.resample - INFO - Drizzling (21, 431) --> (24, 431)
2026-05-12 21:08:21,833 - stcal.alignment.util - INFO - Update S_REGION to POLYGON ICRS 53.106811395 -27.863303158 53.106959505 -27.863303158 53.106959505 -27.862643746 53.106811395 -27.862643746
2026-05-12 21:08:22,045 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s1600a1_s000000004_s2d.fits
2026-05-12 21:08:22,046 - stpipe.step - INFO - Step resample_spec done
2026-05-12 21:08:22,553 - stpipe.step - INFO - Step extract_1d running with args (<SlitModel(24, 431) from program01216_005_clear_prism_s1600a1_s000000004_s2d.fits>,).
2026-05-12 21:08:22,607 - jwst.extract_1d.extract_1d_step - INFO - Using EXTRACT1D reference file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_extract1d_0008.json
2026-05-12 21:08:22,613 - jwst.extract_1d.extract_1d_step - INFO - Using APCORR file /home/runner/crds_cache/references/jwst/nirspec/jwst_nirspec_apcorr_0003.fits
2026-05-12 21:08:22,665 - jwst.extract_1d.extract - INFO - Processing spectral order 0
2026-05-12 21:08:22,668 - jwst.extract_1d.source_location - INFO - Using source_xpos and source_ypos to center extraction.
2026-05-12 21:08:22,671 - jwst.extract_1d.extract - INFO - Computed source location is 14.12, at pixel 215, wavelength 3.44
2026-05-12 21:08:22,672 - jwst.extract_1d.extract - INFO - Nominal aperture start/stop: 14.00 -> 18.00 (inclusive)
2026-05-12 21:08:22,673 - jwst.extract_1d.extract - INFO - Nominal location is 16.00, so offset is -1.88 pixels
2026-05-12 21:08:22,674 - jwst.extract_1d.extract - INFO - Mean aperture start/stop from trace: 12.12 -> 16.12 (inclusive)
2026-05-12 21:08:22,797 - stpipe.step - INFO - Saved model in data/stage3/program01216_005_clear_prism_s1600a1_s000000004_x1d.fits
2026-05-12 21:08:22,798 - stpipe.step - INFO - Step extract_1d done
2026-05-12 21:08:22,801 - jwst.pipeline.calwebb_spec3 - INFO - Ending calwebb_spec3
2026-05-12 21:08:22,814 - stpipe.step - INFO - Step Spec3Pipeline done
2026-05-12 21:08:22,815 - jwst.stpipe.core - INFO - Results used jwst version: 2.0.1
Stage 3 has been completed!
# List the Stage 3 products.
stage3_cal = sorted(glob.glob(stage3_dir + '*_cal.fits'))
stage3_s2d = sorted(glob.glob(stage3_dir + '*_s2d.fits'))
stage3_x1d = sorted(glob.glob(stage3_dir + '*_x1d.fits'))
print(f"Stage 3 CAL Products:\n{'-' * 20}\n" + "\n".join(stage3_cal))
print(f"Stage 3 S3D Products:\n{'-' * 20}\n" + "\n".join(stage3_s2d))
print(f"Stage 3 X1D Products:\n{'-' * 20}\n" + "\n".join(stage3_x1d))
Stage 3 CAL Products:
--------------------
data/stage3/program01216_005_clear_prism_s1600a1_s000000004_cal.fits
data/stage3/program01216_005_clear_prism_s200a1_s000000001_cal.fits
data/stage3/program01216_005_clear_prism_s200a2_s000000002_cal.fits
data/stage3/program01216_005_clear_prism_s400a1_s000000003_cal.fits
data/stage3/program02750_002_clear_prism_s000106280_cal.fits
data/stage3/program02750_002_clear_prism_s000106281_cal.fits
data/stage3/program02750_002_clear_prism_s000106282_cal.fits
data/stage3/program02750_002_clear_prism_s000106283_cal.fits
Stage 3 S3D Products:
--------------------
data/stage3/program01216_005_clear_prism_s1600a1_s000000004_s2d.fits
data/stage3/program01216_005_clear_prism_s200a1_s000000001_s2d.fits
data/stage3/program01216_005_clear_prism_s200a2_s000000002_s2d.fits
data/stage3/program01216_005_clear_prism_s400a1_s000000003_s2d.fits
data/stage3/program02750_002_clear_prism_s000106280_s2d.fits
data/stage3/program02750_002_clear_prism_s000106281_s2d.fits
data/stage3/program02750_002_clear_prism_s000106282_s2d.fits
data/stage3/program02750_002_clear_prism_s000106283_s2d.fits
Stage 3 X1D Products:
--------------------
data/stage3/program01216_005_clear_prism_s1600a1_s000000004_x1d.fits
data/stage3/program01216_005_clear_prism_s200a1_s000000001_x1d.fits
data/stage3/program01216_005_clear_prism_s200a2_s000000002_x1d.fits
data/stage3/program01216_005_clear_prism_s400a1_s000000003_x1d.fits
data/stage3/program02750_002_clear_prism_s000106280_x1d.fits
data/stage3/program02750_002_clear_prism_s000106281_x1d.fits
data/stage3/program02750_002_clear_prism_s000106282_x1d.fits
data/stage3/program02750_002_clear_prism_s000106283_x1d.fits
# Source units can be FLUX or SURF_BRIGHT.
display_spectra(stage3_s2d + stage3_x1d,
source_id='S400A1', source_unit='SURF_BRIGHT', scale='log',
vmin=0, vmax=3, #y_limits=(-1e-6, 0.3e-5),
title_prefix='REPROCESSED', is_stage3=True)
If these final Stage 3 products are background, these can later be used in master background subtraction. For information on how to define different 1D extraction regions, refer to the notebooks listed below.
Related Notebooks#
